Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G337000.4 | Wheat | plastid | 96.08 | 95.98 |
| TraesCS6B01G367600.5 | Wheat | plastid | 94.93 | 95.11 |
| HORVU0Hr1G005920.1 | Barley | peroxisome | 81.05 | 87.68 |
| TraesCS7D01G068900.1 | Wheat | cytosol | 61.53 | 80.48 |
| OQU75712 | Sorghum | plastid | 45.07 | 68.46 |
| Os06t0111300-00 | Rice | plastid | 38.28 | 66.89 |
| Zm00001d045550_P002 | Maize | plastid | 65.07 | 65.07 |
| GSMUA_AchrUn_... | Banana | cytosol, plastid | 52.82 | 54.12 |
| VIT_16s0039g02130.t01 | Wine grape | plastid | 47.94 | 46.78 |
| CDX80666 | Canola | plastid | 42.97 | 44.81 |
| Solyc03g097000.2.1 | Tomato | plastid | 45.55 | 44.69 |
| PGSC0003DMT400008145 | Potato | plastid | 45.45 | 44.6 |
| CDX86171 | Canola | cytosol, mitochondrion | 42.3 | 43.42 |
| KRH42711 | Soybean | plastid | 44.78 | 43.37 |
| AT5G27270.1 | Thale cress | plastid | 41.82 | 42.1 |
| Bra009971.1-P | Field mustard | cytosol, mitochondrion | 42.11 | 41.43 |
| TraesCS5D01G229900.1 | Wheat | plastid | 17.42 | 19.61 |
| TraesCS7D01G162800.1 | Wheat | plastid | 18.09 | 13.05 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G317500.5 | EnsemblPlantsGene:TraesCS6D01G317500 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002885 | InterPro:IPR011990 | InterPro:PPR_long | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR24015 |
| PANTHER:PTHR24015:SF321 | PFAM:PF01535 | PFAM:PF13041 | PFAM:PF17177 | PFscan:PS51375 | SEG:seg |
| SUPFAM:SSF48452 | SUPFAM:SSF81901 | TIGRFAMs:TIGR00756 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6D:+:426099393..426103960
Molecular Weight (calculated)
116041.0 Da
IEP (calculated)
7.158
GRAVY (calculated)
-0.160
Length
1045 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPSAPPPPHT PLAAPTAAVS VTCSYREDDD GAASWSLSSG ARSSSLPSSS RGRRPPPYRR LLHDEARRLL QERRGQGAGA ETPRWVRRTE GQMARYVEDD
0101: RAGHVHGRHV VAAARAARAT ASHPPAGGST MREAMASFVA KLTFREMCVV LREQRGWRQA HDFFSWMKLQ LCYEPSVVAY TILLRAYGNA SKIELAEEAF
0201: LEMLEAGVEP DAVACGTLLC VYARRGRHGD MMLFYAATRR RGVAPPVSAF NFMLSSLQKH RLHGKVIHLW KHMMEMEEAN NVVPNHFTYT VVIGSFVKAG
0301: LLEEAMDVLG KMRASRLVPE EATYSCLISL SSRHGRGEQV VMLYEEMRAH GIVPSNYTCA SLLALYDKSE DYSKALSLFS EMERSRVVID EVIYGILIRI
0401: YGKIGLYDDA QRTFEEIDSA GLLSDEQTYV AMAQVHMNAR NYDKALQVLG LMRSRNVKPS KFSYGALLRC HVAREDIAAA EDVFRALCKY GLPDVFCCND
0501: LLRLYVKLGQ LEKASAFILK MRKEDIQLDE ALCMTVMEVC CKSGMITDAD KILKEMNNGG VTMKSSTMVS IIEMYARNRT SVMQEQDSSS KALACRTDSS
0601: ALNATLKSLL DTPGGSSIAC QLIRKLAREG RTCEAKFLHE QLTQLGVKPE DSATSTLIVQ YGQEQKLHQA EELFESASTS FPIRGPVYNA MVDALCKCGN
0701: IGEAYHLFMK MADQGHSRDV VTISILVTHL TKHGKFQEVE NIMHGCFHGE VELDTVAYNT FIKSMLESGK LYSAVNIYDR MISTGVPRSL QTFNIMISVY
0801: GLGGKLDKAA EMFAAAQELG LLIDEKIYTN MLNFYGKAGR HQEASSLFDR MKELGIMPGK ISCNSMINAY ATARLHDEAE IVFQEMQSHG QVPDSTTYLA
0901: LIRSYSESRC YSKAEKAIQM MLTSGITPSC PHFSHLIFAF LKADQIDEAQ RICSQMQEIG VAVDLACCRA MMRAYLEHGR VDEGISLFET TRGSLKPDSF
1001: ILSAAFHLYE HSGSEPEAGD VLEAIGLHGA SFLRSLKVGS KLEPT
0101: RAGHVHGRHV VAAARAARAT ASHPPAGGST MREAMASFVA KLTFREMCVV LREQRGWRQA HDFFSWMKLQ LCYEPSVVAY TILLRAYGNA SKIELAEEAF
0201: LEMLEAGVEP DAVACGTLLC VYARRGRHGD MMLFYAATRR RGVAPPVSAF NFMLSSLQKH RLHGKVIHLW KHMMEMEEAN NVVPNHFTYT VVIGSFVKAG
0301: LLEEAMDVLG KMRASRLVPE EATYSCLISL SSRHGRGEQV VMLYEEMRAH GIVPSNYTCA SLLALYDKSE DYSKALSLFS EMERSRVVID EVIYGILIRI
0401: YGKIGLYDDA QRTFEEIDSA GLLSDEQTYV AMAQVHMNAR NYDKALQVLG LMRSRNVKPS KFSYGALLRC HVAREDIAAA EDVFRALCKY GLPDVFCCND
0501: LLRLYVKLGQ LEKASAFILK MRKEDIQLDE ALCMTVMEVC CKSGMITDAD KILKEMNNGG VTMKSSTMVS IIEMYARNRT SVMQEQDSSS KALACRTDSS
0601: ALNATLKSLL DTPGGSSIAC QLIRKLAREG RTCEAKFLHE QLTQLGVKPE DSATSTLIVQ YGQEQKLHQA EELFESASTS FPIRGPVYNA MVDALCKCGN
0701: IGEAYHLFMK MADQGHSRDV VTISILVTHL TKHGKFQEVE NIMHGCFHGE VELDTVAYNT FIKSMLESGK LYSAVNIYDR MISTGVPRSL QTFNIMISVY
0801: GLGGKLDKAA EMFAAAQELG LLIDEKIYTN MLNFYGKAGR HQEASSLFDR MKELGIMPGK ISCNSMINAY ATARLHDEAE IVFQEMQSHG QVPDSTTYLA
0901: LIRSYSESRC YSKAEKAIQM MLTSGITPSC PHFSHLIFAF LKADQIDEAQ RICSQMQEIG VAVDLACCRA MMRAYLEHGR VDEGISLFET TRGSLKPDSF
1001: ILSAAFHLYE HSGSEPEAGD VLEAIGLHGA SFLRSLKVGS KLEPT
0001: MKSDFLTSTT HFNPSIFLPK IPSRNSRISI KSSSSSSKVR PDPWSLSDGN PEKPKPRYER PKHPLSDDDA RRIIKKKAQY LSTLRRNQGS QAMTPKWIKR
0101: TPEQMVQYLE DDRNGQMYGK HVVAAIKTVR GLSQRRQGSD DMRFVMSSFV AKLSFRDMCV VLKEQRGWRQ VRDFFSWMKL QLSYRPSVVV YTIVLRLYGQ
0201: VGKIKMAEET FLEMLEVGCE PDAVACGTML CTYARWGRHS AMLTFYKAVQ ERRILLSTSV YNFMLSSLQK KSFHGKVIDL WLEMVEEGVP PNEFTYTLVV
0301: SSYAKQGFKE EALKAFGEMK SLGFVPEEVT YSSVISLSVK AGDWEKAIGL YEDMRSQGIV PSNYTCATML SLYYKTENYP KALSLFADME RNKIPADEVI
0401: RGLIIRIYGK LGLFHDAQSM FEETERLNLL ADEKTYLAMS QVHLNSGNVV KALDVIEMMK TRDIPLSRFA YIVMLQCYAK IQNVDCAEEA FRALSKTGLP
0501: DASSCNDMLN LYTRLNLGEK AKGFIKQIMV DQVHFDIELY KTAMRVYCKE GMVAEAQDLI VKMGREARVK DNRFVQTLAE SMHIVNKHDK HEAVLNVSQL
0601: DVMALGLMLN LRLKEGNLNE TKAILNLMFK TDLGSSAVNR VISSFVREGD VSKAEMIADI IIRLGLRMEE ETIATLIAVY GRQHKLKEAK RLYLAAGESK
0701: TPGKSVIRSM IDAYVRCGWL EDAYGLFMES AEKGCDPGAV TISILVNALT NRGKHREAEH ISRTCLEKNI ELDTVGYNTL IKAMLEAGKL QCASEIYERM
0801: HTSGVPCSIQ TYNTMISVYG RGLQLDKAIE IFSNARRSGL YLDEKIYTNM IMHYGKGGKM SEALSLFSEM QKKGIKPGTP SYNMMVKICA TSRLHHEVDE
0901: LLQAMERNGR CTDLSTYLTL IQVYAESSQF AEAEKTITLV KEKGIPLSHS HFSSLLSALV KAGMMEEAER TYCKMSEAGI SPDSACKRTI LKGYMTCGDA
1001: EKGILFYEKM IRSSVEDDRF VSSVVEDLYK AVGKEQDV
0101: TPEQMVQYLE DDRNGQMYGK HVVAAIKTVR GLSQRRQGSD DMRFVMSSFV AKLSFRDMCV VLKEQRGWRQ VRDFFSWMKL QLSYRPSVVV YTIVLRLYGQ
0201: VGKIKMAEET FLEMLEVGCE PDAVACGTML CTYARWGRHS AMLTFYKAVQ ERRILLSTSV YNFMLSSLQK KSFHGKVIDL WLEMVEEGVP PNEFTYTLVV
0301: SSYAKQGFKE EALKAFGEMK SLGFVPEEVT YSSVISLSVK AGDWEKAIGL YEDMRSQGIV PSNYTCATML SLYYKTENYP KALSLFADME RNKIPADEVI
0401: RGLIIRIYGK LGLFHDAQSM FEETERLNLL ADEKTYLAMS QVHLNSGNVV KALDVIEMMK TRDIPLSRFA YIVMLQCYAK IQNVDCAEEA FRALSKTGLP
0501: DASSCNDMLN LYTRLNLGEK AKGFIKQIMV DQVHFDIELY KTAMRVYCKE GMVAEAQDLI VKMGREARVK DNRFVQTLAE SMHIVNKHDK HEAVLNVSQL
0601: DVMALGLMLN LRLKEGNLNE TKAILNLMFK TDLGSSAVNR VISSFVREGD VSKAEMIADI IIRLGLRMEE ETIATLIAVY GRQHKLKEAK RLYLAAGESK
0701: TPGKSVIRSM IDAYVRCGWL EDAYGLFMES AEKGCDPGAV TISILVNALT NRGKHREAEH ISRTCLEKNI ELDTVGYNTL IKAMLEAGKL QCASEIYERM
0801: HTSGVPCSIQ TYNTMISVYG RGLQLDKAIE IFSNARRSGL YLDEKIYTNM IMHYGKGGKM SEALSLFSEM QKKGIKPGTP SYNMMVKICA TSRLHHEVDE
0901: LLQAMERNGR CTDLSTYLTL IQVYAESSQF AEAEKTITLV KEKGIPLSHS HFSSLLSALV KAGMMEEAER TYCKMSEAGI SPDSACKRTI LKGYMTCGDA
1001: EKGILFYEKM IRSSVEDDRF VSSVVEDLYK AVGKEQDV
Arabidopsis Description
EMB976Pentatricopeptide repeat-containing protein At5g27270 [Source:UniProtKB/Swiss-Prot;Acc:O04647]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.