Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_16s0039g02130.t01 | Wine grape | plastid | 62.93 | 63.4 |
| PGSC0003DMT400008145 | Potato | plastid | 57.46 | 58.22 |
| Solyc03g097000.2.1 | Tomato | plastid | 57.18 | 57.93 |
| CDX80666 | Canola | plastid | 50.7 | 54.59 |
| AT5G27270.1 | Thale cress | plastid | 52.46 | 54.53 |
| GSMUA_AchrUn_... | Banana | cytosol, plastid | 51.53 | 54.51 |
| CDX86171 | Canola | cytosol, mitochondrion | 51.25 | 54.32 |
| Bra009971.1-P | Field mustard | cytosol, mitochondrion | 53.1 | 53.95 |
| Os06t0111300-00 | Rice | plastid | 26.32 | 47.49 |
| OQU75712 | Sorghum | plastid | 29.94 | 46.95 |
| Zm00001d045550_P002 | Maize | plastid | 44.49 | 45.93 |
| HORVU0Hr1G005920.1 | Barley | peroxisome | 40.69 | 45.45 |
| TraesCS6A01G337000.4 | Wheat | plastid | 43.56 | 44.93 |
| TraesCS6D01G317500.5 | Wheat | plastid | 43.37 | 44.78 |
| TraesCS6B01G367600.5 | Wheat | plastid | 42.91 | 44.39 |
| TraesCS7A01G074100.1 | Wheat | mitochondrion | 28.36 | 44.03 |
| TraesCS7D01G068900.1 | Wheat | cytosol | 29.01 | 39.17 |
| KRH63118 | Soybean | plastid | 14.74 | 18.62 |
| KRH27784 | Soybean | plastid | 15.85 | 11.5 |
Protein Annotations
| Gene3D:1.25.40.10 | EntrezGene:100818679 | MapMan:35.1 | EMBL:ACUP02004823 | EnsemblPlantsGene:GLYMA_08G106500 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004519 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009451 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0043231 | GO:GO:0090305 |
| UniProt:I1KS45 | InterPro:IPR002885 | InterPro:IPR011990 | EnsemblPlants:KRH42711 | ProteinID:KRH42711 | ProteinID:KRH42711.1 |
| PFAM:PF01535 | PFAM:PF13041 | PFAM:PF13812 | PFAM:PF17177 | InterPro:PPR_long | PFscan:PS51375 |
| PANTHER:PTHR24015 | PANTHER:PTHR24015:SF321 | InterPro:Pentatricopeptide_repeat | SUPFAM:SSF81901 | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf |
| UniParc:UPI0002337FB6 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:8208069..8214244
Molecular Weight (calculated)
122433.0 Da
IEP (calculated)
9.021
GRAVY (calculated)
-0.247
Length
1079 amino acids
Sequence
(BLAST)
(BLAST)
0001: MECLKSPFLF STSLLPPPSH QPYSITPNIK NKKNKKPRVP IFIRCTIQRD PWSPTSGDPT RPKPRSRNPK KPLSDDNARR IIKGKAAYQS ILRRNQGPQA
0101: QTPRWIKRTP EQMVRYLQDD RNGQLYGRHV LAAVKKVRSL SQRVDGDYDM RMVMASFVGK LSFKEMCVVL KEQKGWRQVR DFFAWMKLQL SYRPSVIVYT
0201: IVLRLYGQVG KLKLAEEIFL EMLDVGCEPD EVACGTMLCS YARWGRHKAM LSFYSAIKER GIILSVAVFN FMMSSLQKKS LHREVVHVWK DMLGKGVIPN
0301: NFTYTVAISS FVKEGLHEDA FKTFDEMRNY GVVPEELTYS LLINLNAKSG NRDEVQRLYE DMRFRGIIPS NYTCASLLSL YYKYEDYPRA LSLFSEMVRN
0401: KISTDEVIYG LLIRIYGKLG LYEDAHKTFE ETKNRGQLTS EKTYLAMAQV HLTSGNVDKA LEVIELMKSS NLWFSRFAYI VLLQCYVMKE DVASAEGTFL
0501: ALSKTGPPDA GSCNDMLSLY MGLNLTNKAK EFIVQIRENE TNFDKELYRT VMKVYCKEGM LPEAEQLTNQ MVKTEYFKND KFFMTFYWIL CEHKGDMESD
0601: DELVAIEPID KFNATALGLM LSLYLANGNF NKTKILLKLL LGYAAGGSKI VSQLIINLSK EGEISKAELL NHQLTKLGCR MDEATVASLI SHYGKQQMLK
0701: QAEDIFAEYI NSPTSSKVLY NSMINAYAKC GKQEKAYLLY KQATGEGRDL GAVGISIAVN SLTNGGKHQE AENIVQRSLE ENLELDTVAY NTFIKAMLEA
0801: GKLHFASSIF EHMISSGVAP SIETFNTMIS VYGQDQKLDR AVEMFNQASS CSVPLDEKTY MNLIGYYGKA GLMLEASQLF SKMQEGGIKP GKVSYNIMIN
0901: VYANAGVLHE TEKLFHTMQR QGYLPDSFTY LSLVQAYTRS LNYSKAEETI HAMQSKGIPP SCVHFNILLH AFIKAGLIHE AKRVYEDLST FGLVPDLVCH
1001: RTMLNGYLKC GYVEEGINFF ESICESTKSD RFIMSAAVHF YKSAGKGRQA KEILNLMNNM GIPFLKKLEV GSGERVKTP
0101: QTPRWIKRTP EQMVRYLQDD RNGQLYGRHV LAAVKKVRSL SQRVDGDYDM RMVMASFVGK LSFKEMCVVL KEQKGWRQVR DFFAWMKLQL SYRPSVIVYT
0201: IVLRLYGQVG KLKLAEEIFL EMLDVGCEPD EVACGTMLCS YARWGRHKAM LSFYSAIKER GIILSVAVFN FMMSSLQKKS LHREVVHVWK DMLGKGVIPN
0301: NFTYTVAISS FVKEGLHEDA FKTFDEMRNY GVVPEELTYS LLINLNAKSG NRDEVQRLYE DMRFRGIIPS NYTCASLLSL YYKYEDYPRA LSLFSEMVRN
0401: KISTDEVIYG LLIRIYGKLG LYEDAHKTFE ETKNRGQLTS EKTYLAMAQV HLTSGNVDKA LEVIELMKSS NLWFSRFAYI VLLQCYVMKE DVASAEGTFL
0501: ALSKTGPPDA GSCNDMLSLY MGLNLTNKAK EFIVQIRENE TNFDKELYRT VMKVYCKEGM LPEAEQLTNQ MVKTEYFKND KFFMTFYWIL CEHKGDMESD
0601: DELVAIEPID KFNATALGLM LSLYLANGNF NKTKILLKLL LGYAAGGSKI VSQLIINLSK EGEISKAELL NHQLTKLGCR MDEATVASLI SHYGKQQMLK
0701: QAEDIFAEYI NSPTSSKVLY NSMINAYAKC GKQEKAYLLY KQATGEGRDL GAVGISIAVN SLTNGGKHQE AENIVQRSLE ENLELDTVAY NTFIKAMLEA
0801: GKLHFASSIF EHMISSGVAP SIETFNTMIS VYGQDQKLDR AVEMFNQASS CSVPLDEKTY MNLIGYYGKA GLMLEASQLF SKMQEGGIKP GKVSYNIMIN
0901: VYANAGVLHE TEKLFHTMQR QGYLPDSFTY LSLVQAYTRS LNYSKAEETI HAMQSKGIPP SCVHFNILLH AFIKAGLIHE AKRVYEDLST FGLVPDLVCH
1001: RTMLNGYLKC GYVEEGINFF ESICESTKSD RFIMSAAVHF YKSAGKGRQA KEILNLMNNM GIPFLKKLEV GSGERVKTP
0001: MKSDFLTSTT HFNPSIFLPK IPSRNSRISI KSSSSSSKVR PDPWSLSDGN PEKPKPRYER PKHPLSDDDA RRIIKKKAQY LSTLRRNQGS QAMTPKWIKR
0101: TPEQMVQYLE DDRNGQMYGK HVVAAIKTVR GLSQRRQGSD DMRFVMSSFV AKLSFRDMCV VLKEQRGWRQ VRDFFSWMKL QLSYRPSVVV YTIVLRLYGQ
0201: VGKIKMAEET FLEMLEVGCE PDAVACGTML CTYARWGRHS AMLTFYKAVQ ERRILLSTSV YNFMLSSLQK KSFHGKVIDL WLEMVEEGVP PNEFTYTLVV
0301: SSYAKQGFKE EALKAFGEMK SLGFVPEEVT YSSVISLSVK AGDWEKAIGL YEDMRSQGIV PSNYTCATML SLYYKTENYP KALSLFADME RNKIPADEVI
0401: RGLIIRIYGK LGLFHDAQSM FEETERLNLL ADEKTYLAMS QVHLNSGNVV KALDVIEMMK TRDIPLSRFA YIVMLQCYAK IQNVDCAEEA FRALSKTGLP
0501: DASSCNDMLN LYTRLNLGEK AKGFIKQIMV DQVHFDIELY KTAMRVYCKE GMVAEAQDLI VKMGREARVK DNRFVQTLAE SMHIVNKHDK HEAVLNVSQL
0601: DVMALGLMLN LRLKEGNLNE TKAILNLMFK TDLGSSAVNR VISSFVREGD VSKAEMIADI IIRLGLRMEE ETIATLIAVY GRQHKLKEAK RLYLAAGESK
0701: TPGKSVIRSM IDAYVRCGWL EDAYGLFMES AEKGCDPGAV TISILVNALT NRGKHREAEH ISRTCLEKNI ELDTVGYNTL IKAMLEAGKL QCASEIYERM
0801: HTSGVPCSIQ TYNTMISVYG RGLQLDKAIE IFSNARRSGL YLDEKIYTNM IMHYGKGGKM SEALSLFSEM QKKGIKPGTP SYNMMVKICA TSRLHHEVDE
0901: LLQAMERNGR CTDLSTYLTL IQVYAESSQF AEAEKTITLV KEKGIPLSHS HFSSLLSALV KAGMMEEAER TYCKMSEAGI SPDSACKRTI LKGYMTCGDA
1001: EKGILFYEKM IRSSVEDDRF VSSVVEDLYK AVGKEQDV
0101: TPEQMVQYLE DDRNGQMYGK HVVAAIKTVR GLSQRRQGSD DMRFVMSSFV AKLSFRDMCV VLKEQRGWRQ VRDFFSWMKL QLSYRPSVVV YTIVLRLYGQ
0201: VGKIKMAEET FLEMLEVGCE PDAVACGTML CTYARWGRHS AMLTFYKAVQ ERRILLSTSV YNFMLSSLQK KSFHGKVIDL WLEMVEEGVP PNEFTYTLVV
0301: SSYAKQGFKE EALKAFGEMK SLGFVPEEVT YSSVISLSVK AGDWEKAIGL YEDMRSQGIV PSNYTCATML SLYYKTENYP KALSLFADME RNKIPADEVI
0401: RGLIIRIYGK LGLFHDAQSM FEETERLNLL ADEKTYLAMS QVHLNSGNVV KALDVIEMMK TRDIPLSRFA YIVMLQCYAK IQNVDCAEEA FRALSKTGLP
0501: DASSCNDMLN LYTRLNLGEK AKGFIKQIMV DQVHFDIELY KTAMRVYCKE GMVAEAQDLI VKMGREARVK DNRFVQTLAE SMHIVNKHDK HEAVLNVSQL
0601: DVMALGLMLN LRLKEGNLNE TKAILNLMFK TDLGSSAVNR VISSFVREGD VSKAEMIADI IIRLGLRMEE ETIATLIAVY GRQHKLKEAK RLYLAAGESK
0701: TPGKSVIRSM IDAYVRCGWL EDAYGLFMES AEKGCDPGAV TISILVNALT NRGKHREAEH ISRTCLEKNI ELDTVGYNTL IKAMLEAGKL QCASEIYERM
0801: HTSGVPCSIQ TYNTMISVYG RGLQLDKAIE IFSNARRSGL YLDEKIYTNM IMHYGKGGKM SEALSLFSEM QKKGIKPGTP SYNMMVKICA TSRLHHEVDE
0901: LLQAMERNGR CTDLSTYLTL IQVYAESSQF AEAEKTITLV KEKGIPLSHS HFSSLLSALV KAGMMEEAER TYCKMSEAGI SPDSACKRTI LKGYMTCGDA
1001: EKGILFYEKM IRSSVEDDRF VSSVVEDLYK AVGKEQDV
Arabidopsis Description
EMB976Pentatricopeptide repeat-containing protein At5g27270 [Source:UniProtKB/Swiss-Prot;Acc:O04647]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.