Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G337000.4 | Wheat | plastid | 95.21 | 94.93 |
| TraesCS6D01G317500.5 | Wheat | plastid | 95.11 | 94.93 |
| HORVU0Hr1G005920.1 | Barley | peroxisome | 80.44 | 86.85 |
| OQU75712 | Sorghum | plastid | 44.2 | 67.01 |
| Os06t0111300-00 | Rice | plastid | 37.78 | 65.89 |
| Zm00001d045550_P002 | Maize | plastid | 65.1 | 64.98 |
| GSMUA_AchrUn_... | Banana | cytosol, plastid | 52.73 | 53.92 |
| VIT_16s0039g02130.t01 | Wine grape | plastid | 48.03 | 46.78 |
| PGSC0003DMT400008145 | Potato | plastid | 45.73 | 44.79 |
| Solyc03g097000.2.1 | Tomato | plastid | 45.73 | 44.79 |
| CDX80666 | Canola | plastid | 42.57 | 44.31 |
| CDX86171 | Canola | cytosol, mitochondrion | 41.9 | 42.93 |
| KRH42711 | Soybean | plastid | 44.39 | 42.91 |
| AT5G27270.1 | Thale cress | plastid | 41.99 | 42.2 |
| Bra009971.1-P | Field mustard | cytosol, mitochondrion | 41.9 | 41.15 |
| TraesCS5B01G220900.1 | Wheat | mitochondrion, plastid | 16.59 | 18.6 |
| TraesCS7B01G066600.1 | Wheat | plastid | 17.83 | 12.87 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G367600.5 | EnsemblPlantsGene:TraesCS6B01G367600 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002885 | InterPro:IPR011990 | InterPro:PPR_long | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR24015 |
| PANTHER:PTHR24015:SF321 | PFAM:PF01535 | PFAM:PF13041 | PFAM:PF17177 | PFscan:PS51375 | SEG:seg |
| SUPFAM:SSF48452 | SUPFAM:SSF81901 | TIGRFAMs:TIGR00756 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6B:+:641394814..641398948
Molecular Weight (calculated)
115767.0 Da
IEP (calculated)
6.837
GRAVY (calculated)
-0.160
Length
1043 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPSAPPPHTP LAAPTAAVSV TCSYREDDDG AASWSLSSGA PSSSPSSSRG RRPPPYRRLL HDEARRLRQE RRGQGAGAET PWWVRRSEGQ MARYVEDDRA
0101: GHVHGRHVVA AARAARATAS RPPAGGSTMR EAMASFVAKL TFREMCVVLR EQRGWRQAHD FFSWMKLQLC YEPSVVAYTI LLKAYGNAGK IELAEEAFLE
0201: MLEAGVEPDA VACGTLLCAY ARQGRHGDMM LFYAATHRRG VAPPVSAFNF MLSSLQKHRL HGKVIHLWKH MMEMEEANNV VPNHFTYTVV IGSFVKEGLL
0301: EEAMDVMGKM RASRLVPEEA TYSCLISLSS RHGRGEQVVM LYEEMRAHGI VPSNYTCASL LAFYDKSEDY SKAFSLFSEM ERSRVVIDEV IYGILIRIYG
0401: KIGLYDDAQR TFEEIDSAGL LSDEQTYVAM AQVHMNARSY DKALQVLGLM RSRNVKPSSF SYGALLRCHV AREDLAAAED VFRALCKYGL PDVFCCNDLL
0501: RLYVKLGQLE KASAFILKMR KENIQLDEAL CMTVMEVCCK SGMIADADKI LKEMNNGGVT MKSSTMVSMI EMYAKNRTSV MQEQDSSSKA LAYRTDGSAL
0601: NATLKSLLDT PGGSSIACQL IRKLAREGRT CEAKFLHEQL IQLGVKPEDS ATATLIVQYG QEQKLHQAEE LFESASTPFP IGGPVYNAMV DALCKCGNIE
0701: ETYHLFMKMA DQGHSRDVVT ISILVTHLTK RGKFQEVENI IHGCFHGEVE LDTVAYNTFI KSMLESGKLY SAVNIYDRMI STGVPRSLQT FNIMISVYGL
0801: GGKLDKAAEM FAAAQELGLL IDEKIYTNML NFYGKAGRHQ EASSLFDRMK EVGIMPGKIS FNSMINAYAT SRLHDEAEIV FQEMQSHSQV PDSTTYLALI
0901: RSYSESRCCS KAEKAIQMML SSGITPSCPH FSHLIFAFLK ADQIDEAQRI CSQMQEIGVA VDLACCRAMM RAYLEHGRVD EGISLFETTC GSLKPDSFIL
1001: SAAFHLYEHS GSEPEAGDVL EAIGLHGASF LRNLKVGSKL EPT
0101: GHVHGRHVVA AARAARATAS RPPAGGSTMR EAMASFVAKL TFREMCVVLR EQRGWRQAHD FFSWMKLQLC YEPSVVAYTI LLKAYGNAGK IELAEEAFLE
0201: MLEAGVEPDA VACGTLLCAY ARQGRHGDMM LFYAATHRRG VAPPVSAFNF MLSSLQKHRL HGKVIHLWKH MMEMEEANNV VPNHFTYTVV IGSFVKEGLL
0301: EEAMDVMGKM RASRLVPEEA TYSCLISLSS RHGRGEQVVM LYEEMRAHGI VPSNYTCASL LAFYDKSEDY SKAFSLFSEM ERSRVVIDEV IYGILIRIYG
0401: KIGLYDDAQR TFEEIDSAGL LSDEQTYVAM AQVHMNARSY DKALQVLGLM RSRNVKPSSF SYGALLRCHV AREDLAAAED VFRALCKYGL PDVFCCNDLL
0501: RLYVKLGQLE KASAFILKMR KENIQLDEAL CMTVMEVCCK SGMIADADKI LKEMNNGGVT MKSSTMVSMI EMYAKNRTSV MQEQDSSSKA LAYRTDGSAL
0601: NATLKSLLDT PGGSSIACQL IRKLAREGRT CEAKFLHEQL IQLGVKPEDS ATATLIVQYG QEQKLHQAEE LFESASTPFP IGGPVYNAMV DALCKCGNIE
0701: ETYHLFMKMA DQGHSRDVVT ISILVTHLTK RGKFQEVENI IHGCFHGEVE LDTVAYNTFI KSMLESGKLY SAVNIYDRMI STGVPRSLQT FNIMISVYGL
0801: GGKLDKAAEM FAAAQELGLL IDEKIYTNML NFYGKAGRHQ EASSLFDRMK EVGIMPGKIS FNSMINAYAT SRLHDEAEIV FQEMQSHSQV PDSTTYLALI
0901: RSYSESRCCS KAEKAIQMML SSGITPSCPH FSHLIFAFLK ADQIDEAQRI CSQMQEIGVA VDLACCRAMM RAYLEHGRVD EGISLFETTC GSLKPDSFIL
1001: SAAFHLYEHS GSEPEAGDVL EAIGLHGASF LRNLKVGSKL EPT
0001: MKSDFLTSTT HFNPSIFLPK IPSRNSRISI KSSSSSSKVR PDPWSLSDGN PEKPKPRYER PKHPLSDDDA RRIIKKKAQY LSTLRRNQGS QAMTPKWIKR
0101: TPEQMVQYLE DDRNGQMYGK HVVAAIKTVR GLSQRRQGSD DMRFVMSSFV AKLSFRDMCV VLKEQRGWRQ VRDFFSWMKL QLSYRPSVVV YTIVLRLYGQ
0201: VGKIKMAEET FLEMLEVGCE PDAVACGTML CTYARWGRHS AMLTFYKAVQ ERRILLSTSV YNFMLSSLQK KSFHGKVIDL WLEMVEEGVP PNEFTYTLVV
0301: SSYAKQGFKE EALKAFGEMK SLGFVPEEVT YSSVISLSVK AGDWEKAIGL YEDMRSQGIV PSNYTCATML SLYYKTENYP KALSLFADME RNKIPADEVI
0401: RGLIIRIYGK LGLFHDAQSM FEETERLNLL ADEKTYLAMS QVHLNSGNVV KALDVIEMMK TRDIPLSRFA YIVMLQCYAK IQNVDCAEEA FRALSKTGLP
0501: DASSCNDMLN LYTRLNLGEK AKGFIKQIMV DQVHFDIELY KTAMRVYCKE GMVAEAQDLI VKMGREARVK DNRFVQTLAE SMHIVNKHDK HEAVLNVSQL
0601: DVMALGLMLN LRLKEGNLNE TKAILNLMFK TDLGSSAVNR VISSFVREGD VSKAEMIADI IIRLGLRMEE ETIATLIAVY GRQHKLKEAK RLYLAAGESK
0701: TPGKSVIRSM IDAYVRCGWL EDAYGLFMES AEKGCDPGAV TISILVNALT NRGKHREAEH ISRTCLEKNI ELDTVGYNTL IKAMLEAGKL QCASEIYERM
0801: HTSGVPCSIQ TYNTMISVYG RGLQLDKAIE IFSNARRSGL YLDEKIYTNM IMHYGKGGKM SEALSLFSEM QKKGIKPGTP SYNMMVKICA TSRLHHEVDE
0901: LLQAMERNGR CTDLSTYLTL IQVYAESSQF AEAEKTITLV KEKGIPLSHS HFSSLLSALV KAGMMEEAER TYCKMSEAGI SPDSACKRTI LKGYMTCGDA
1001: EKGILFYEKM IRSSVEDDRF VSSVVEDLYK AVGKEQDV
0101: TPEQMVQYLE DDRNGQMYGK HVVAAIKTVR GLSQRRQGSD DMRFVMSSFV AKLSFRDMCV VLKEQRGWRQ VRDFFSWMKL QLSYRPSVVV YTIVLRLYGQ
0201: VGKIKMAEET FLEMLEVGCE PDAVACGTML CTYARWGRHS AMLTFYKAVQ ERRILLSTSV YNFMLSSLQK KSFHGKVIDL WLEMVEEGVP PNEFTYTLVV
0301: SSYAKQGFKE EALKAFGEMK SLGFVPEEVT YSSVISLSVK AGDWEKAIGL YEDMRSQGIV PSNYTCATML SLYYKTENYP KALSLFADME RNKIPADEVI
0401: RGLIIRIYGK LGLFHDAQSM FEETERLNLL ADEKTYLAMS QVHLNSGNVV KALDVIEMMK TRDIPLSRFA YIVMLQCYAK IQNVDCAEEA FRALSKTGLP
0501: DASSCNDMLN LYTRLNLGEK AKGFIKQIMV DQVHFDIELY KTAMRVYCKE GMVAEAQDLI VKMGREARVK DNRFVQTLAE SMHIVNKHDK HEAVLNVSQL
0601: DVMALGLMLN LRLKEGNLNE TKAILNLMFK TDLGSSAVNR VISSFVREGD VSKAEMIADI IIRLGLRMEE ETIATLIAVY GRQHKLKEAK RLYLAAGESK
0701: TPGKSVIRSM IDAYVRCGWL EDAYGLFMES AEKGCDPGAV TISILVNALT NRGKHREAEH ISRTCLEKNI ELDTVGYNTL IKAMLEAGKL QCASEIYERM
0801: HTSGVPCSIQ TYNTMISVYG RGLQLDKAIE IFSNARRSGL YLDEKIYTNM IMHYGKGGKM SEALSLFSEM QKKGIKPGTP SYNMMVKICA TSRLHHEVDE
0901: LLQAMERNGR CTDLSTYLTL IQVYAESSQF AEAEKTITLV KEKGIPLSHS HFSSLLSALV KAGMMEEAER TYCKMSEAGI SPDSACKRTI LKGYMTCGDA
1001: EKGILFYEKM IRSSVEDDRF VSSVVEDLYK AVGKEQDV
Arabidopsis Description
EMB976Pentatricopeptide repeat-containing protein At5g27270 [Source:UniProtKB/Swiss-Prot;Acc:O04647]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.