Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G033940.1 | Barley | cytosol | 83.46 | 95.87 |
| TraesCS7D01G162800.1 | Wheat | plastid | 95.43 | 95.23 |
| TraesCS7A01G161500.1 | Wheat | plastid | 94.74 | 94.61 |
| Os06t0199100-01 | Rice | cytosol | 71.21 | 80.2 |
| KXG19540 | Sorghum | plastid | 76.33 | 76.28 |
| Zm00001d045014_P003 | Maize | plastid | 75.43 | 75.17 |
| GSMUA_Achr10P... | Banana | plastid | 55.57 | 58.19 |
| CDX95788 | Canola | cytosol | 13.56 | 54.75 |
| Bra022281.1-P | Field mustard | cytosol | 48.65 | 53.58 |
| VIT_16s0039g02570.t01 | Wine grape | plastid | 54.67 | 53.31 |
| AT3G18110.1 | Thale cress | plastid | 51.63 | 51.81 |
| Solyc03g096830.2.1 | Tomato | plastid | 52.39 | 51.32 |
| KRH27784 | Soybean | plastid | 52.8 | 51.31 |
| CDX95789 | Canola | cytosol | 20.07 | 38.72 |
| CDX92197 | Canola | cytosol | 2.63 | 24.84 |
| PGSC0003DMT400001470 | Potato | nucleus | 2.42 | 19.89 |
| TraesCS5B01G220900.1 | Wheat | mitochondrion, plastid | 12.11 | 18.82 |
| TraesCS6B01G367600.5 | Wheat | plastid | 12.87 | 17.83 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 |
| InterPro:IPR002885 | InterPro:IPR011990 | PFAM:PF01535 | PFAM:PF12854 | PFAM:PF13041 | PFAM:PF13812 |
| PFAM:PF17177 | InterPro:PPR_long | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF556 | InterPro:Pentatricopeptide_repeat |
| SUPFAM:SSF48452 | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | EnsemblPlantsGene:TraesCS7B01G066600 | EnsemblPlants:TraesCS7B01G066600.1 | SEG:seg |
Description
No Description!
Coordinates
chr7B:-:72289234..72295334
Molecular Weight (calculated)
160627.0 Da
IEP (calculated)
5.926
GRAVY (calculated)
-0.127
Length
1445 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPLMAVSSPP PFSFPSARHP RRATAGATAA SSATASDDFD YPLADPSIRW PSLRFPHLPA PRFPAADAAP PPPAPARPEP AEDDSSAPSA SGPSAVAVEP
0101: LDARAHRGRL KKLSKVALRR ARDWRERVSD LAGRLLALPP GAPVAEVLDD AWVSPDELAY VVRAVGAASW RRALDAFEWL VASGDGAPGP RVVAVVLGVL
0201: GRARQDGFAE EVFLRFAGEG ATVQVFNAMM GVYARSGRFD DVRQLLDAMR GQGIEPDLVS FNTLINASAK SGCLAPGAAF DLLHEVRQAG LRPDVITYNT
0301: LISACSQGSI LDDAMAVFKE MIDSECRPDL WTYNAMVSVH GRCGTAQDAE GMFMELLDKG FKPDAVTYNS LLHAFAKEGD VDAVERVCEE LVKAGFRKDG
0401: ITYNTMIHMY GKMGRLDLAL GLYDEMRAIG CTPDAVTYTV LIDSLGKVDR ISDAGKVLEE MVDAGLKPTL VTFSALICAY AKGGRRDEAE QTFDRMVASG
0501: VKPDRLAYLV MLDIIARSGE TKKLMALYRT MMKDGYMLDD TLYQVMLAAL AKGNEHEEIE GVIQDMEAVC QMDQQLVYSI LIKAGCISQG AKLLKKACLQ
0601: GHEPDSKSLL SILDAYETTG KHEEGLSLLQ CIREHVPSSH NMISECSIML LCKNQKIAAA LQEYSSMQTL MCGSFGQDRN LYECLITCLE EAEFLPEASQ
0701: VFCDMQFIGV ESSQKIYESM ISTYCKLGFP ETAHQLMDEA VQSGVWLNTL SSRVTIIEAY GKTKLWQHAE NFVKGLNQEA GVDRRIWNAL IHAYAESGLY
0801: EQARAVFDIM IKKGPLPTVD SINGMMRALI IDGRLDELFV VVQELQDMGF KISKSTVILM LEAFAKAGDV FEVMKIYNGM KEAGYLPNMH IYRSMISLLC
0901: RNKRFRDVEL MVAEMEAAGF KPDLVILNTL LLMYTGNGDF DKTVQVYHSI LEAGLEPDED TYNTLIVMYS RNLRPEEGFT LLNEMGKRGL TPRLESYKSL
1001: LVASGKAKLW EQGEQLFEEI RSKGYRLNRS LYHVMMKMHR DACNHSKAEQ LLAAMKEDGI EPTIATMHIL MTSYGTAGHP VEAEKVLNSL KCSSLEVSSL
1101: PYSTVFDAYL KNGDYNLGIT KLLEMKRDGI KPDHQVWTCF IRAASLCEQT DDAVLLLNSL QDCGFDLPIR LLTERTPSLL TEVDSFLEEL ETLEDSAALN
1201: FVNALEDLLW AFERRATATY IFQLAVNRSI YRHSIFRVIE KDWGADFRKL SAGAALVALT LWLDQMQDAS LQGSPESPKT IVLVTGEGEY NMVSLRKTIR
1301: AYLLEMGSPF LPCRARTGRF VAKFYSLKMW LKDSPFCMDL ELKDALALPK MNSMKLTEGY FMRAGLVSTF KDIHEQLGEV RPKKFSRLAM LSEESRAKFI
1401: KADIKGRKDK LERNKEKGLV VPRKSKKGPR RAKFVREQST QEVLK
0101: LDARAHRGRL KKLSKVALRR ARDWRERVSD LAGRLLALPP GAPVAEVLDD AWVSPDELAY VVRAVGAASW RRALDAFEWL VASGDGAPGP RVVAVVLGVL
0201: GRARQDGFAE EVFLRFAGEG ATVQVFNAMM GVYARSGRFD DVRQLLDAMR GQGIEPDLVS FNTLINASAK SGCLAPGAAF DLLHEVRQAG LRPDVITYNT
0301: LISACSQGSI LDDAMAVFKE MIDSECRPDL WTYNAMVSVH GRCGTAQDAE GMFMELLDKG FKPDAVTYNS LLHAFAKEGD VDAVERVCEE LVKAGFRKDG
0401: ITYNTMIHMY GKMGRLDLAL GLYDEMRAIG CTPDAVTYTV LIDSLGKVDR ISDAGKVLEE MVDAGLKPTL VTFSALICAY AKGGRRDEAE QTFDRMVASG
0501: VKPDRLAYLV MLDIIARSGE TKKLMALYRT MMKDGYMLDD TLYQVMLAAL AKGNEHEEIE GVIQDMEAVC QMDQQLVYSI LIKAGCISQG AKLLKKACLQ
0601: GHEPDSKSLL SILDAYETTG KHEEGLSLLQ CIREHVPSSH NMISECSIML LCKNQKIAAA LQEYSSMQTL MCGSFGQDRN LYECLITCLE EAEFLPEASQ
0701: VFCDMQFIGV ESSQKIYESM ISTYCKLGFP ETAHQLMDEA VQSGVWLNTL SSRVTIIEAY GKTKLWQHAE NFVKGLNQEA GVDRRIWNAL IHAYAESGLY
0801: EQARAVFDIM IKKGPLPTVD SINGMMRALI IDGRLDELFV VVQELQDMGF KISKSTVILM LEAFAKAGDV FEVMKIYNGM KEAGYLPNMH IYRSMISLLC
0901: RNKRFRDVEL MVAEMEAAGF KPDLVILNTL LLMYTGNGDF DKTVQVYHSI LEAGLEPDED TYNTLIVMYS RNLRPEEGFT LLNEMGKRGL TPRLESYKSL
1001: LVASGKAKLW EQGEQLFEEI RSKGYRLNRS LYHVMMKMHR DACNHSKAEQ LLAAMKEDGI EPTIATMHIL MTSYGTAGHP VEAEKVLNSL KCSSLEVSSL
1101: PYSTVFDAYL KNGDYNLGIT KLLEMKRDGI KPDHQVWTCF IRAASLCEQT DDAVLLLNSL QDCGFDLPIR LLTERTPSLL TEVDSFLEEL ETLEDSAALN
1201: FVNALEDLLW AFERRATATY IFQLAVNRSI YRHSIFRVIE KDWGADFRKL SAGAALVALT LWLDQMQDAS LQGSPESPKT IVLVTGEGEY NMVSLRKTIR
1301: AYLLEMGSPF LPCRARTGRF VAKFYSLKMW LKDSPFCMDL ELKDALALPK MNSMKLTEGY FMRAGLVSTF KDIHEQLGEV RPKKFSRLAM LSEESRAKFI
1401: KADIKGRKDK LERNKEKGLV VPRKSKKGPR RAKFVREQST QEVLK
0001: MAVSAGALAF PALSVRATLN PEIKDEQANI SSTTSSSQKF TYSRASPAVR WPHLNLREIY DSTPSQTLSS PVSPIAGTPD SGDVVDSIAS REEQKTKDET
0101: AVATRRRRVK KMNKVALIKA KDWRERVKFL TDKILSLKSN QFVADILDAR LVQMTPTDYC FVVKSVGQES WQRALEVFEW LNLRHWHSPN ARMVAAILGV
0201: LGRWNQESLA VEIFTRAEPT VGDRVQVYNA MMGVYSRSGK FSKAQELVDA MRQRGCVPDL ISFNTLINAR LKSGGLTPNL AVELLDMVRN SGLRPDAITY
0301: NTLLSACSRD SNLDGAVKVF EDMEAHRCQP DLWTYNAMIS VYGRCGLAAE AERLFMELEL KGFFPDAVTY NSLLYAFARE RNTEKVKEVY QQMQKMGFGK
0401: DEMTYNTIIH MYGKQGQLDL ALQLYKDMKG LSGRNPDAIT YTVLIDSLGK ANRTVEAAAL MSEMLDVGIK PTLQTYSALI CGYAKAGKRE EAEDTFSCML
0501: RSGTKPDNLA YSVMLDVLLR GNETRKAWGL YRDMISDGHT PSYTLYELMI LGLMKENRSD DIQKTIRDME ELCGMNPLEI SSVLVKGECF DLAARQLKVA
0601: ITNGYELEND TLLSILGSYS SSGRHSEAFE LLEFLKEHAS GSKRLITEAL IVLHCKVNNL SAALDEYFAD PCVHGWCFGS STMYETLLHC CVANEHYAEA
0701: SQVFSDLRLS GCEASESVCK SMVVVYCKLG FPETAHQVVN QAETKGFHFA CSPMYTDIIE AYGKQKLWQK AESVVGNLRQ SGRTPDLKTW NSLMSAYAQC
0801: GCYERARAIF NTMMRDGPSP TVESINILLH ALCVDGRLEE LYVVVEELQD MGFKISKSSI LLMLDAFARA GNIFEVKKIY SSMKAAGYLP TIRLYRMMIE
0901: LLCKGKRVRD AEIMVSEMEE ANFKVELAIW NSMLKMYTAI EDYKKTVQVY QRIKETGLEP DETTYNTLII MYCRDRRPEE GYLLMQQMRN LGLDPKLDTY
1001: KSLISAFGKQ KCLEQAEQLF EELLSKGLKL DRSFYHTMMK ISRDSGSDSK AEKLLQMMKN AGIEPTLATM HLLMVSYSSS GNPQEAEKVL SNLKDTEVEL
1101: TTLPYSSVID AYLRSKDYNS GIERLLEMKK EGLEPDHRIW TCFVRAASFS KEKIEVMLLL KALEDIGFDL PIRLLAGRPE LLVSEVDGWF EKLKSIEDNA
1201: ALNFVNALLN LLWAFELRAT ASWVFQLGIK RGIFSLDVFR VADKDWGADF RRLSGGAALV ALTLWLDHMQ DASLEGYPES PKSVVLITGT AEYNGISLDK
1301: TLKACLWEMG SPFLPCKTRT GLLVAKAHSL RMWLKDSPFC FDLELKDSVS LPESNSMDLI DGCFIRRGLV PAFNHIKERL GGFVSPKKFS RLALLPDEMR
1401: ERVIKTDIEG HRQKLEKMKK KKMGNETNGI NTRRKFVRSK
0101: AVATRRRRVK KMNKVALIKA KDWRERVKFL TDKILSLKSN QFVADILDAR LVQMTPTDYC FVVKSVGQES WQRALEVFEW LNLRHWHSPN ARMVAAILGV
0201: LGRWNQESLA VEIFTRAEPT VGDRVQVYNA MMGVYSRSGK FSKAQELVDA MRQRGCVPDL ISFNTLINAR LKSGGLTPNL AVELLDMVRN SGLRPDAITY
0301: NTLLSACSRD SNLDGAVKVF EDMEAHRCQP DLWTYNAMIS VYGRCGLAAE AERLFMELEL KGFFPDAVTY NSLLYAFARE RNTEKVKEVY QQMQKMGFGK
0401: DEMTYNTIIH MYGKQGQLDL ALQLYKDMKG LSGRNPDAIT YTVLIDSLGK ANRTVEAAAL MSEMLDVGIK PTLQTYSALI CGYAKAGKRE EAEDTFSCML
0501: RSGTKPDNLA YSVMLDVLLR GNETRKAWGL YRDMISDGHT PSYTLYELMI LGLMKENRSD DIQKTIRDME ELCGMNPLEI SSVLVKGECF DLAARQLKVA
0601: ITNGYELEND TLLSILGSYS SSGRHSEAFE LLEFLKEHAS GSKRLITEAL IVLHCKVNNL SAALDEYFAD PCVHGWCFGS STMYETLLHC CVANEHYAEA
0701: SQVFSDLRLS GCEASESVCK SMVVVYCKLG FPETAHQVVN QAETKGFHFA CSPMYTDIIE AYGKQKLWQK AESVVGNLRQ SGRTPDLKTW NSLMSAYAQC
0801: GCYERARAIF NTMMRDGPSP TVESINILLH ALCVDGRLEE LYVVVEELQD MGFKISKSSI LLMLDAFARA GNIFEVKKIY SSMKAAGYLP TIRLYRMMIE
0901: LLCKGKRVRD AEIMVSEMEE ANFKVELAIW NSMLKMYTAI EDYKKTVQVY QRIKETGLEP DETTYNTLII MYCRDRRPEE GYLLMQQMRN LGLDPKLDTY
1001: KSLISAFGKQ KCLEQAEQLF EELLSKGLKL DRSFYHTMMK ISRDSGSDSK AEKLLQMMKN AGIEPTLATM HLLMVSYSSS GNPQEAEKVL SNLKDTEVEL
1101: TTLPYSSVID AYLRSKDYNS GIERLLEMKK EGLEPDHRIW TCFVRAASFS KEKIEVMLLL KALEDIGFDL PIRLLAGRPE LLVSEVDGWF EKLKSIEDNA
1201: ALNFVNALLN LLWAFELRAT ASWVFQLGIK RGIFSLDVFR VADKDWGADF RRLSGGAALV ALTLWLDHMQ DASLEGYPES PKSVVLITGT AEYNGISLDK
1301: TLKACLWEMG SPFLPCKTRT GLLVAKAHSL RMWLKDSPFC FDLELKDSVS LPESNSMDLI DGCFIRRGLV PAFNHIKERL GGFVSPKKFS RLALLPDEMR
1401: ERVIKTDIEG HRQKLEKMKK KKMGNETNGI NTRRKFVRSK
Arabidopsis Description
EMB1270Pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q5G1S8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.