Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G033940.1 | Barley | cytosol | 83.21 | 95.71 |
| TraesCS7D01G162800.1 | Wheat | plastid | 95.16 | 95.1 |
| TraesCS7B01G066600.1 | Wheat | plastid | 94.61 | 94.74 |
| Os06t0199100-01 | Rice | cytosol | 70.97 | 80.05 |
| KXG19540 | Sorghum | plastid | 76.3 | 76.35 |
| Zm00001d045014_P003 | Maize | plastid | 75.54 | 75.38 |
| GSMUA_Achr10P... | Banana | plastid | 55.36 | 58.04 |
| CDX95788 | Canola | cytosol | 13.82 | 55.87 |
| VIT_16s0039g02570.t01 | Wine grape | plastid | 55.01 | 53.71 |
| Bra022281.1-P | Field mustard | cytosol | 48.58 | 53.58 |
| AT3G18110.1 | Thale cress | plastid | 51.62 | 51.88 |
| KRH27784 | Soybean | plastid | 52.8 | 51.38 |
| Solyc03g096830.2.1 | Tomato | plastid | 52.32 | 51.32 |
| CDX95789 | Canola | cytosol | 20.11 | 38.85 |
| CDX92197 | Canola | cytosol | 2.56 | 24.18 |
| PGSC0003DMT400001470 | Potato | nucleus | 2.42 | 19.89 |
| TraesCS7A01G074100.1 | Wheat | mitochondrion | 9.33 | 19.42 |
| TraesCS5A01G222100.1 | Wheat | mitochondrion, plastid | 12.3 | 19.14 |
| TraesCS6A01G337000.4 | Wheat | plastid | 12.72 | 17.59 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 | InterPro:IPR002885 |
| InterPro:IPR011990 | PFAM:PF01535 | PFAM:PF12854 | PFAM:PF13041 | PFAM:PF13812 | PFAM:PF17177 |
| InterPro:PPR_long | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF556 | InterPro:Pentatricopeptide_repeat | SUPFAM:SSF48452 |
| TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | EnsemblPlantsGene:TraesCS7A01G161500 | EnsemblPlants:TraesCS7A01G161500.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr7A:-:118145757..118159311
Molecular Weight (calculated)
161159.0 Da
IEP (calculated)
6.650
GRAVY (calculated)
-0.134
Length
1447 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPLMAISSPL PFSFPLPSAH HPRRATAGAT AAPSATASDD FDYPLADPSV RWPSLRFPHL PAPRFPAADA APPAPARPEP AKDDSTAPSA SGPSAVAVAV
0101: EPLDARAHRG RLKKLSKVAL RRARDWRERV SDLADRLLAL PPGAPVAEVL DGAWVSPDEL AYVVRAVGAA SWRRALDAFE WLAASGDGSP GPRVVAVVLG
0201: VLGRARQDGL AEEVFLRFAG EGATVQVFNA MMGVYARSGR FDDVRQLLDA MRGQGIEPDL VSFNTLINAS AKSGCLAPGA AFDLLHEVRQ AGLRPDVITY
0301: NTLISACSQG SILDDAVAVF KEMIDSECRP DLWTYNAMVS VHGRCGTARE AEQMFMELLD KGFKPDAVTY NSLLHAFAKE GDVDAVERVC EELVKAGFRK
0401: DGITYNTMIH MYGKMGRLDL ALGLYDEMRA IGCTPDAVTY TVLIDSLGKV DRISDAGKVL EEMVDAGLKP TLVTFSALIC AYAKGGRRDE AEQTFDRMVA
0501: SGVKPDRLAY LVMLDIIARS GETKKLMLLY QTMMKDGYMP DDTLYQVMLV ALAKGNKHEE IEGVVQDMEV VCQMDRQLVY SVLIKAGCIS QGAKLLKKAC
0601: LQGHEPDSKS LLSILDDYET MGKHEEGLSL LQCIRENVPS SHNLISECSI MLMCKNQKIA AALQEYSSMQ TLKCGSFGQD RNLYECLITC LEEAEFLPEA
0701: SQVFCDMQFI GIEPSQKIYE SMISTYCKLG FPETARQLMD EAVQSGVWLN TLSSRVTIIK AYGKTKLWQH AENFVKGLNQ EAGVDRRIWN ALIHAYAESG
0801: LYEQARAVFD VMIKKGPLPT VDSINGMMRA LITDGRLDEL FVVVQELQDM GFKISKSTVI LMLEAFAKAG DVFEVMKIYN GMKEAGYLPN MHIYRSMISL
0901: LCRNKRFRDV ELMVAEMEAA GFKPDLVILN TLLLMYTGNR DFDKTVKVYH SILEAGLEPD EDTYNTLIVM YSRNLRPEEG FTLLNEMGKR GLTPRLESYK
1001: SLLVASGKAK LWEQGEQLFE EIRSKGYRLN RSLYHVMMKM YRDACNHSKA EQLLAAMKED GIEPTIATMH ILMTSYGTAG HPVEAEKVLN SLKSSSLEVS
1101: SLPYSTVFDA YLKNGDYNLA ITKLLEMKRD GIKPDHQVWT CFIRAASLCE RTDDAVLLLN SLQDCGFDLP IRLLTERTPS LLTEVDSFLQ ELETLEDSAA
1201: LNFVNALEDL LWAFERRATA TYIFQLAVNR SIYRHSIFRV IEKDWGADFR KLSAGAALVA LTLWLDQMQD ASLQGSPESP KSIVLVTGEG EYNMVSLRKT
1301: IRAYLLEMGS PFLPCRARTG RFVAKFYSLK MWLKDSPFCM DLELKDAPAL PKMNSMKLTE GYFMRAGLVS TFKDIHEQLG EVRPKKFSRL AMLSEESRAK
1401: FIKADIKGRK HKLERMKEKG LVIPRKSKKG PRRAKFVREQ STQEVLK
0101: EPLDARAHRG RLKKLSKVAL RRARDWRERV SDLADRLLAL PPGAPVAEVL DGAWVSPDEL AYVVRAVGAA SWRRALDAFE WLAASGDGSP GPRVVAVVLG
0201: VLGRARQDGL AEEVFLRFAG EGATVQVFNA MMGVYARSGR FDDVRQLLDA MRGQGIEPDL VSFNTLINAS AKSGCLAPGA AFDLLHEVRQ AGLRPDVITY
0301: NTLISACSQG SILDDAVAVF KEMIDSECRP DLWTYNAMVS VHGRCGTARE AEQMFMELLD KGFKPDAVTY NSLLHAFAKE GDVDAVERVC EELVKAGFRK
0401: DGITYNTMIH MYGKMGRLDL ALGLYDEMRA IGCTPDAVTY TVLIDSLGKV DRISDAGKVL EEMVDAGLKP TLVTFSALIC AYAKGGRRDE AEQTFDRMVA
0501: SGVKPDRLAY LVMLDIIARS GETKKLMLLY QTMMKDGYMP DDTLYQVMLV ALAKGNKHEE IEGVVQDMEV VCQMDRQLVY SVLIKAGCIS QGAKLLKKAC
0601: LQGHEPDSKS LLSILDDYET MGKHEEGLSL LQCIRENVPS SHNLISECSI MLMCKNQKIA AALQEYSSMQ TLKCGSFGQD RNLYECLITC LEEAEFLPEA
0701: SQVFCDMQFI GIEPSQKIYE SMISTYCKLG FPETARQLMD EAVQSGVWLN TLSSRVTIIK AYGKTKLWQH AENFVKGLNQ EAGVDRRIWN ALIHAYAESG
0801: LYEQARAVFD VMIKKGPLPT VDSINGMMRA LITDGRLDEL FVVVQELQDM GFKISKSTVI LMLEAFAKAG DVFEVMKIYN GMKEAGYLPN MHIYRSMISL
0901: LCRNKRFRDV ELMVAEMEAA GFKPDLVILN TLLLMYTGNR DFDKTVKVYH SILEAGLEPD EDTYNTLIVM YSRNLRPEEG FTLLNEMGKR GLTPRLESYK
1001: SLLVASGKAK LWEQGEQLFE EIRSKGYRLN RSLYHVMMKM YRDACNHSKA EQLLAAMKED GIEPTIATMH ILMTSYGTAG HPVEAEKVLN SLKSSSLEVS
1101: SLPYSTVFDA YLKNGDYNLA ITKLLEMKRD GIKPDHQVWT CFIRAASLCE RTDDAVLLLN SLQDCGFDLP IRLLTERTPS LLTEVDSFLQ ELETLEDSAA
1201: LNFVNALEDL LWAFERRATA TYIFQLAVNR SIYRHSIFRV IEKDWGADFR KLSAGAALVA LTLWLDQMQD ASLQGSPESP KSIVLVTGEG EYNMVSLRKT
1301: IRAYLLEMGS PFLPCRARTG RFVAKFYSLK MWLKDSPFCM DLELKDAPAL PKMNSMKLTE GYFMRAGLVS TFKDIHEQLG EVRPKKFSRL AMLSEESRAK
1401: FIKADIKGRK HKLERMKEKG LVIPRKSKKG PRRAKFVREQ STQEVLK
0001: MAVSAGALAF PALSVRATLN PEIKDEQANI SSTTSSSQKF TYSRASPAVR WPHLNLREIY DSTPSQTLSS PVSPIAGTPD SGDVVDSIAS REEQKTKDET
0101: AVATRRRRVK KMNKVALIKA KDWRERVKFL TDKILSLKSN QFVADILDAR LVQMTPTDYC FVVKSVGQES WQRALEVFEW LNLRHWHSPN ARMVAAILGV
0201: LGRWNQESLA VEIFTRAEPT VGDRVQVYNA MMGVYSRSGK FSKAQELVDA MRQRGCVPDL ISFNTLINAR LKSGGLTPNL AVELLDMVRN SGLRPDAITY
0301: NTLLSACSRD SNLDGAVKVF EDMEAHRCQP DLWTYNAMIS VYGRCGLAAE AERLFMELEL KGFFPDAVTY NSLLYAFARE RNTEKVKEVY QQMQKMGFGK
0401: DEMTYNTIIH MYGKQGQLDL ALQLYKDMKG LSGRNPDAIT YTVLIDSLGK ANRTVEAAAL MSEMLDVGIK PTLQTYSALI CGYAKAGKRE EAEDTFSCML
0501: RSGTKPDNLA YSVMLDVLLR GNETRKAWGL YRDMISDGHT PSYTLYELMI LGLMKENRSD DIQKTIRDME ELCGMNPLEI SSVLVKGECF DLAARQLKVA
0601: ITNGYELEND TLLSILGSYS SSGRHSEAFE LLEFLKEHAS GSKRLITEAL IVLHCKVNNL SAALDEYFAD PCVHGWCFGS STMYETLLHC CVANEHYAEA
0701: SQVFSDLRLS GCEASESVCK SMVVVYCKLG FPETAHQVVN QAETKGFHFA CSPMYTDIIE AYGKQKLWQK AESVVGNLRQ SGRTPDLKTW NSLMSAYAQC
0801: GCYERARAIF NTMMRDGPSP TVESINILLH ALCVDGRLEE LYVVVEELQD MGFKISKSSI LLMLDAFARA GNIFEVKKIY SSMKAAGYLP TIRLYRMMIE
0901: LLCKGKRVRD AEIMVSEMEE ANFKVELAIW NSMLKMYTAI EDYKKTVQVY QRIKETGLEP DETTYNTLII MYCRDRRPEE GYLLMQQMRN LGLDPKLDTY
1001: KSLISAFGKQ KCLEQAEQLF EELLSKGLKL DRSFYHTMMK ISRDSGSDSK AEKLLQMMKN AGIEPTLATM HLLMVSYSSS GNPQEAEKVL SNLKDTEVEL
1101: TTLPYSSVID AYLRSKDYNS GIERLLEMKK EGLEPDHRIW TCFVRAASFS KEKIEVMLLL KALEDIGFDL PIRLLAGRPE LLVSEVDGWF EKLKSIEDNA
1201: ALNFVNALLN LLWAFELRAT ASWVFQLGIK RGIFSLDVFR VADKDWGADF RRLSGGAALV ALTLWLDHMQ DASLEGYPES PKSVVLITGT AEYNGISLDK
1301: TLKACLWEMG SPFLPCKTRT GLLVAKAHSL RMWLKDSPFC FDLELKDSVS LPESNSMDLI DGCFIRRGLV PAFNHIKERL GGFVSPKKFS RLALLPDEMR
1401: ERVIKTDIEG HRQKLEKMKK KKMGNETNGI NTRRKFVRSK
0101: AVATRRRRVK KMNKVALIKA KDWRERVKFL TDKILSLKSN QFVADILDAR LVQMTPTDYC FVVKSVGQES WQRALEVFEW LNLRHWHSPN ARMVAAILGV
0201: LGRWNQESLA VEIFTRAEPT VGDRVQVYNA MMGVYSRSGK FSKAQELVDA MRQRGCVPDL ISFNTLINAR LKSGGLTPNL AVELLDMVRN SGLRPDAITY
0301: NTLLSACSRD SNLDGAVKVF EDMEAHRCQP DLWTYNAMIS VYGRCGLAAE AERLFMELEL KGFFPDAVTY NSLLYAFARE RNTEKVKEVY QQMQKMGFGK
0401: DEMTYNTIIH MYGKQGQLDL ALQLYKDMKG LSGRNPDAIT YTVLIDSLGK ANRTVEAAAL MSEMLDVGIK PTLQTYSALI CGYAKAGKRE EAEDTFSCML
0501: RSGTKPDNLA YSVMLDVLLR GNETRKAWGL YRDMISDGHT PSYTLYELMI LGLMKENRSD DIQKTIRDME ELCGMNPLEI SSVLVKGECF DLAARQLKVA
0601: ITNGYELEND TLLSILGSYS SSGRHSEAFE LLEFLKEHAS GSKRLITEAL IVLHCKVNNL SAALDEYFAD PCVHGWCFGS STMYETLLHC CVANEHYAEA
0701: SQVFSDLRLS GCEASESVCK SMVVVYCKLG FPETAHQVVN QAETKGFHFA CSPMYTDIIE AYGKQKLWQK AESVVGNLRQ SGRTPDLKTW NSLMSAYAQC
0801: GCYERARAIF NTMMRDGPSP TVESINILLH ALCVDGRLEE LYVVVEELQD MGFKISKSSI LLMLDAFARA GNIFEVKKIY SSMKAAGYLP TIRLYRMMIE
0901: LLCKGKRVRD AEIMVSEMEE ANFKVELAIW NSMLKMYTAI EDYKKTVQVY QRIKETGLEP DETTYNTLII MYCRDRRPEE GYLLMQQMRN LGLDPKLDTY
1001: KSLISAFGKQ KCLEQAEQLF EELLSKGLKL DRSFYHTMMK ISRDSGSDSK AEKLLQMMKN AGIEPTLATM HLLMVSYSSS GNPQEAEKVL SNLKDTEVEL
1101: TTLPYSSVID AYLRSKDYNS GIERLLEMKK EGLEPDHRIW TCFVRAASFS KEKIEVMLLL KALEDIGFDL PIRLLAGRPE LLVSEVDGWF EKLKSIEDNA
1201: ALNFVNALLN LLWAFELRAT ASWVFQLGIK RGIFSLDVFR VADKDWGADF RRLSGGAALV ALTLWLDHMQ DASLEGYPES PKSVVLITGT AEYNGISLDK
1301: TLKACLWEMG SPFLPCKTRT GLLVAKAHSL RMWLKDSPFC FDLELKDSVS LPESNSMDLI DGCFIRRGLV PAFNHIKERL GGFVSPKKFS RLALLPDEMR
1401: ERVIKTDIEG HRQKLEKMKK KKMGNETNGI NTRRKFVRSK
Arabidopsis Description
EMB1270Pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q5G1S8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.