Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G317500.5 | Wheat | plastid | 95.98 | 96.08 |
| TraesCS6B01G367600.5 | Wheat | plastid | 94.93 | 95.21 |
| HORVU0Hr1G005920.1 | Barley | peroxisome | 80.88 | 87.58 |
| TraesCS7A01G074100.1 | Wheat | mitochondrion | 56.69 | 85.32 |
| OQU75712 | Sorghum | plastid | 44.93 | 68.31 |
| Os06t0111300-00 | Rice | plastid | 38.34 | 67.06 |
| Zm00001d045550_P002 | Maize | plastid | 65.68 | 65.74 |
| GSMUA_AchrUn_... | Banana | cytosol, plastid | 53.35 | 54.71 |
| VIT_16s0039g02130.t01 | Wine grape | plastid | 48.37 | 47.25 |
| Solyc03g097000.2.1 | Tomato | plastid | 46.27 | 45.45 |
| PGSC0003DMT400008145 | Potato | plastid | 46.08 | 45.26 |
| CDX80666 | Canola | plastid | 43.21 | 45.11 |
| CDX86171 | Canola | cytosol, mitochondrion | 42.73 | 43.91 |
| KRH42711 | Soybean | plastid | 44.93 | 43.56 |
| AT5G27270.1 | Thale cress | plastid | 42.35 | 42.68 |
| Bra009971.1-P | Field mustard | cytosol, mitochondrion | 42.45 | 41.81 |
| TraesCS5A01G222100.1 | Wheat | mitochondrion, plastid | 17.3 | 19.46 |
| TraesCS7A01G161500.1 | Wheat | plastid | 17.59 | 12.72 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G337000.4 | EnsemblPlantsGene:TraesCS6A01G337000 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002885 | InterPro:IPR011990 | InterPro:PPR_long | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR24015 |
| PANTHER:PTHR24015:SF321 | PFAM:PF01535 | PFAM:PF13041 | PFAM:PF17177 | PFscan:PS51375 | SEG:seg |
| SUPFAM:SSF48452 | SUPFAM:SSF81901 | TIGRFAMs:TIGR00756 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6A:+:571019999..571024140
Molecular Weight (calculated)
116058.0 Da
IEP (calculated)
6.984
GRAVY (calculated)
-0.170
Length
1046 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPSAPPPPPH TPLAAPTAAV SVTCSYREDD DGAASWSLSS GAPSSSSPSS SRGRRPPPYR RLLHDEARRL RQERRGQGAG AGTPRWVRRT EGQMARYVED
0101: DRAGHVHGRH VVAAARAARA TASRPPAGGS AMREAMASFV AKLTFREMCV VLREQRGWRQ AHDFFSWMKL QLCYEPSVVA YTILLRAYGN AGKIELAEEA
0201: FLEMLEAGVE PDAVACGTLL CAYARRGRHG DMMLFYAATR RRGVAPPVSA FNFMLSSLQK HRLHGKVIQL WKHMMEMEEA NNVVPNHFTY TVVIGSFVKE
0301: GLLEEAMDVM GKMRASRLIP EEATYSCLIS LSSRHGRGEQ VVMLYEEMRA HGIVPSNYTC ASLLALYDKS EDYSKALSLF SEMERSRVVI DEVIYGILIR
0401: IYGKIGLYDD AQRTFEEIDS AGLLSDEQTY VAMAQVHMNA RNYDKALQVF GLMRSRNVKP SSFSYGALLR CHVAREDIAA AEDVFRALCK YGLPDVFCCN
0501: DLLRLYVKLG QLEKASAFIL KMRKEDIQLD EALCMTVMEV CCKSGMIADA DKILKEMNNG GVTMKSSTMV SMIEMYARNR TSVMQEQDSS SKALACQTDS
0601: SALNAALKSL LDTPGGSSIA CQLIRKLARE GRTCEAKFLH EQLTQLGVKP EDSATATLIV QYGQEQKLHQ AEELFESEST SFPIGAPVYN AMVDALCKCG
0701: NIEEAYRLFM KMADQGHSRD VVTISILVTH LTKHGKFQEV ENIIHGCFHG EVELDTVVYN TFIKSMLESG KLYSAVNIYD RMISTGVRRS LQTFNIMISV
0801: YGLGGKLDKA AEMFAAAQEL GLLIDEKIYT NMLNFYGKAG RHQEASSLFD RMKELGIMPG KISFNSMINA YATSRLHDEA EIVFQEMQSH GQVPDSTTYL
0901: ALIRSYSESR CYSKAEKAIQ MMLSSGITPS CPHFSHLIIA FLKADQIDEA QRICGQMQEI GVAVDLACCR AMMRAYLEHG RVDEGISLFE TTRGSLKPDS
1001: FILSAAFHLY EHSGSEPEAG DVLEAIGLHG ASFLRSLKVG SKLEPT
0101: DRAGHVHGRH VVAAARAARA TASRPPAGGS AMREAMASFV AKLTFREMCV VLREQRGWRQ AHDFFSWMKL QLCYEPSVVA YTILLRAYGN AGKIELAEEA
0201: FLEMLEAGVE PDAVACGTLL CAYARRGRHG DMMLFYAATR RRGVAPPVSA FNFMLSSLQK HRLHGKVIQL WKHMMEMEEA NNVVPNHFTY TVVIGSFVKE
0301: GLLEEAMDVM GKMRASRLIP EEATYSCLIS LSSRHGRGEQ VVMLYEEMRA HGIVPSNYTC ASLLALYDKS EDYSKALSLF SEMERSRVVI DEVIYGILIR
0401: IYGKIGLYDD AQRTFEEIDS AGLLSDEQTY VAMAQVHMNA RNYDKALQVF GLMRSRNVKP SSFSYGALLR CHVAREDIAA AEDVFRALCK YGLPDVFCCN
0501: DLLRLYVKLG QLEKASAFIL KMRKEDIQLD EALCMTVMEV CCKSGMIADA DKILKEMNNG GVTMKSSTMV SMIEMYARNR TSVMQEQDSS SKALACQTDS
0601: SALNAALKSL LDTPGGSSIA CQLIRKLARE GRTCEAKFLH EQLTQLGVKP EDSATATLIV QYGQEQKLHQ AEELFESEST SFPIGAPVYN AMVDALCKCG
0701: NIEEAYRLFM KMADQGHSRD VVTISILVTH LTKHGKFQEV ENIIHGCFHG EVELDTVVYN TFIKSMLESG KLYSAVNIYD RMISTGVRRS LQTFNIMISV
0801: YGLGGKLDKA AEMFAAAQEL GLLIDEKIYT NMLNFYGKAG RHQEASSLFD RMKELGIMPG KISFNSMINA YATSRLHDEA EIVFQEMQSH GQVPDSTTYL
0901: ALIRSYSESR CYSKAEKAIQ MMLSSGITPS CPHFSHLIIA FLKADQIDEA QRICGQMQEI GVAVDLACCR AMMRAYLEHG RVDEGISLFE TTRGSLKPDS
1001: FILSAAFHLY EHSGSEPEAG DVLEAIGLHG ASFLRSLKVG SKLEPT
0001: MKSDFLTSTT HFNPSIFLPK IPSRNSRISI KSSSSSSKVR PDPWSLSDGN PEKPKPRYER PKHPLSDDDA RRIIKKKAQY LSTLRRNQGS QAMTPKWIKR
0101: TPEQMVQYLE DDRNGQMYGK HVVAAIKTVR GLSQRRQGSD DMRFVMSSFV AKLSFRDMCV VLKEQRGWRQ VRDFFSWMKL QLSYRPSVVV YTIVLRLYGQ
0201: VGKIKMAEET FLEMLEVGCE PDAVACGTML CTYARWGRHS AMLTFYKAVQ ERRILLSTSV YNFMLSSLQK KSFHGKVIDL WLEMVEEGVP PNEFTYTLVV
0301: SSYAKQGFKE EALKAFGEMK SLGFVPEEVT YSSVISLSVK AGDWEKAIGL YEDMRSQGIV PSNYTCATML SLYYKTENYP KALSLFADME RNKIPADEVI
0401: RGLIIRIYGK LGLFHDAQSM FEETERLNLL ADEKTYLAMS QVHLNSGNVV KALDVIEMMK TRDIPLSRFA YIVMLQCYAK IQNVDCAEEA FRALSKTGLP
0501: DASSCNDMLN LYTRLNLGEK AKGFIKQIMV DQVHFDIELY KTAMRVYCKE GMVAEAQDLI VKMGREARVK DNRFVQTLAE SMHIVNKHDK HEAVLNVSQL
0601: DVMALGLMLN LRLKEGNLNE TKAILNLMFK TDLGSSAVNR VISSFVREGD VSKAEMIADI IIRLGLRMEE ETIATLIAVY GRQHKLKEAK RLYLAAGESK
0701: TPGKSVIRSM IDAYVRCGWL EDAYGLFMES AEKGCDPGAV TISILVNALT NRGKHREAEH ISRTCLEKNI ELDTVGYNTL IKAMLEAGKL QCASEIYERM
0801: HTSGVPCSIQ TYNTMISVYG RGLQLDKAIE IFSNARRSGL YLDEKIYTNM IMHYGKGGKM SEALSLFSEM QKKGIKPGTP SYNMMVKICA TSRLHHEVDE
0901: LLQAMERNGR CTDLSTYLTL IQVYAESSQF AEAEKTITLV KEKGIPLSHS HFSSLLSALV KAGMMEEAER TYCKMSEAGI SPDSACKRTI LKGYMTCGDA
1001: EKGILFYEKM IRSSVEDDRF VSSVVEDLYK AVGKEQDV
0101: TPEQMVQYLE DDRNGQMYGK HVVAAIKTVR GLSQRRQGSD DMRFVMSSFV AKLSFRDMCV VLKEQRGWRQ VRDFFSWMKL QLSYRPSVVV YTIVLRLYGQ
0201: VGKIKMAEET FLEMLEVGCE PDAVACGTML CTYARWGRHS AMLTFYKAVQ ERRILLSTSV YNFMLSSLQK KSFHGKVIDL WLEMVEEGVP PNEFTYTLVV
0301: SSYAKQGFKE EALKAFGEMK SLGFVPEEVT YSSVISLSVK AGDWEKAIGL YEDMRSQGIV PSNYTCATML SLYYKTENYP KALSLFADME RNKIPADEVI
0401: RGLIIRIYGK LGLFHDAQSM FEETERLNLL ADEKTYLAMS QVHLNSGNVV KALDVIEMMK TRDIPLSRFA YIVMLQCYAK IQNVDCAEEA FRALSKTGLP
0501: DASSCNDMLN LYTRLNLGEK AKGFIKQIMV DQVHFDIELY KTAMRVYCKE GMVAEAQDLI VKMGREARVK DNRFVQTLAE SMHIVNKHDK HEAVLNVSQL
0601: DVMALGLMLN LRLKEGNLNE TKAILNLMFK TDLGSSAVNR VISSFVREGD VSKAEMIADI IIRLGLRMEE ETIATLIAVY GRQHKLKEAK RLYLAAGESK
0701: TPGKSVIRSM IDAYVRCGWL EDAYGLFMES AEKGCDPGAV TISILVNALT NRGKHREAEH ISRTCLEKNI ELDTVGYNTL IKAMLEAGKL QCASEIYERM
0801: HTSGVPCSIQ TYNTMISVYG RGLQLDKAIE IFSNARRSGL YLDEKIYTNM IMHYGKGGKM SEALSLFSEM QKKGIKPGTP SYNMMVKICA TSRLHHEVDE
0901: LLQAMERNGR CTDLSTYLTL IQVYAESSQF AEAEKTITLV KEKGIPLSHS HFSSLLSALV KAGMMEEAER TYCKMSEAGI SPDSACKRTI LKGYMTCGDA
1001: EKGILFYEKM IRSSVEDDRF VSSVVEDLYK AVGKEQDV
Arabidopsis Description
EMB976Pentatricopeptide repeat-containing protein At5g27270 [Source:UniProtKB/Swiss-Prot;Acc:O04647]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.