Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU75712 | Sorghum | plastid | 51.67 | 78.49 |
| Os06t0111300-00 | Rice | plastid | 37.99 | 66.39 |
| TraesCS6A01G337000.4 | Wheat | plastid | 65.74 | 65.68 |
| TraesCS6B01G367600.5 | Wheat | plastid | 64.98 | 65.1 |
| TraesCS6D01G317500.5 | Wheat | plastid | 65.07 | 65.07 |
| HORVU0Hr1G005920.1 | Barley | peroxisome | 59.43 | 64.29 |
| TraesCS7A01G074100.1 | Wheat | mitochondrion | 40.0 | 60.14 |
| TraesCS7D01G068900.1 | Wheat | cytosol | 43.16 | 56.45 |
| GSMUA_AchrUn_... | Banana | cytosol, plastid | 53.49 | 54.8 |
| VIT_16s0039g02130.t01 | Wine grape | plastid | 47.85 | 46.69 |
| CDX80666 | Canola | plastid | 44.11 | 46.01 |
| CDX86171 | Canola | cytosol, mitochondrion | 43.83 | 44.99 |
| KRH42711 | Soybean | plastid | 45.93 | 44.49 |
| Solyc03g097000.2.1 | Tomato | plastid | 44.98 | 44.13 |
| PGSC0003DMT400008145 | Potato | plastid | 44.98 | 44.13 |
| AT5G27270.1 | Thale cress | plastid | 43.35 | 43.64 |
| Bra009971.1-P | Field mustard | cytosol, mitochondrion | 43.83 | 43.13 |
| Zm00001d024409_P001 | Maize | plastid | 15.5 | 16.86 |
| Zm00001d045014_P003 | Maize | plastid | 17.13 | 12.34 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | UniProt:A0A1D6NWQ3 | ProteinID:AQL02530.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR002885 | InterPro:IPR011990 | PFAM:PF01535 | PFAM:PF13041 | PFAM:PF17177 |
| InterPro:PPR_long | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF321 | InterPro:Pentatricopeptide_repeat | SUPFAM:SSF48452 |
| SUPFAM:SSF81901 | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI000845103C | EnsemblPlantsGene:Zm00001d045550 | EnsemblPlants:Zm00001d045550_P002 |
| EnsemblPlants:Zm00001d045550_T002 | SEG:seg | : | : | : | : |
Description
Pentatricopeptide repeat-containing protein
Coordinates
chr9:-:26527595..26531578
Molecular Weight (calculated)
116202.0 Da
IEP (calculated)
7.465
GRAVY (calculated)
-0.181
Length
1045 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAMAAAPHSH HTPVGAAAAT SAAVSMPCCS SASCYDDKDG DPSSSWSLSS PRRRQPYRRL LRDEAQRLRR ARRSQGPGAD TPRWVRRTTD QMARYIEDDR
0101: AGHVYGRHVV AAVRAVRATA SRPSADMRQA MASFVTRLTF REMCVVLREQ RGWRQARDFF AWMKLQLCYE PSVVAYTVLL RLYGRVGKVK LAEETFLEML
0201: QVGCEPDAVA CGTLLCAYAR WGRHEDMMLF YSAVRGRGLV PPISVYNYMI SSLQKQKLHG KVIHVWKQML EAGAPPNQFT YTVVIGSLVK EDLLEEAVDL
0301: FGEMRRRRFV PEEATYSLLI SASSRHGKGE QALRLFEEMK GQGIAPSNYT CASLLALHCK NEDYPKALAL FSDMESSKVI PDEVIYGILI RIYGKLGLYE
0401: EARQTFGEIE KAGLLNDEQT YVAMAQVHLN AGDCDRALEV LESMKTRGVK PSRFSYSALL RCHVAKEDVV AAEDTFRALS QSQHGLPDAF CCNDMLRLYM
0501: RLGRLDKARA LVSVLLREDG FQLDENLSTT VMEFYCKSGM VEDAEKLLED IQRNRKPVKV PTLLLLVEMY ARNRPSVVLE ERSSSRALGS SAASVALNSL
0601: LDMPGGLSSV SLLISRLARE GSTDEARFIY DQLTELGTKP DDSAVATLIV QYGQAKQLER AQELFDSASA SFPDGALVCN AMVDAFCKCG RAEDAYHLFM
0701: EMADQGSYRN AVTASILVTH LTKHGKFQEV ENIMHGCFRD EVQLDTALYN TFIKSMLESG KLHSAVSIYD RMVSSGVSQS MQTFNTMISF SLLSSVYGKG
0801: GKLDKAVEMF AAAQELGLPI DEKMYTNMLS LYGKAGRHQE ASLMFKRMKE DGIRPGKISF NSMINAYATS GLFSEAKSVF QEMQDCGHAP DSFSYLALIR
0901: AYTEAKLYTE AEEAIRTMTL SSSNTTPSCP HFSHLILAFL KEGRVGEARR IYGQMMEVGV APDLACCRAM MRVYVDRGLV DDGISLYETT CGSLKPDSFV
1001: LSAAFHLYER AGRECEAQGV LESISASGTS FLRNMKIGFG SSLRS
0101: AGHVYGRHVV AAVRAVRATA SRPSADMRQA MASFVTRLTF REMCVVLREQ RGWRQARDFF AWMKLQLCYE PSVVAYTVLL RLYGRVGKVK LAEETFLEML
0201: QVGCEPDAVA CGTLLCAYAR WGRHEDMMLF YSAVRGRGLV PPISVYNYMI SSLQKQKLHG KVIHVWKQML EAGAPPNQFT YTVVIGSLVK EDLLEEAVDL
0301: FGEMRRRRFV PEEATYSLLI SASSRHGKGE QALRLFEEMK GQGIAPSNYT CASLLALHCK NEDYPKALAL FSDMESSKVI PDEVIYGILI RIYGKLGLYE
0401: EARQTFGEIE KAGLLNDEQT YVAMAQVHLN AGDCDRALEV LESMKTRGVK PSRFSYSALL RCHVAKEDVV AAEDTFRALS QSQHGLPDAF CCNDMLRLYM
0501: RLGRLDKARA LVSVLLREDG FQLDENLSTT VMEFYCKSGM VEDAEKLLED IQRNRKPVKV PTLLLLVEMY ARNRPSVVLE ERSSSRALGS SAASVALNSL
0601: LDMPGGLSSV SLLISRLARE GSTDEARFIY DQLTELGTKP DDSAVATLIV QYGQAKQLER AQELFDSASA SFPDGALVCN AMVDAFCKCG RAEDAYHLFM
0701: EMADQGSYRN AVTASILVTH LTKHGKFQEV ENIMHGCFRD EVQLDTALYN TFIKSMLESG KLHSAVSIYD RMVSSGVSQS MQTFNTMISF SLLSSVYGKG
0801: GKLDKAVEMF AAAQELGLPI DEKMYTNMLS LYGKAGRHQE ASLMFKRMKE DGIRPGKISF NSMINAYATS GLFSEAKSVF QEMQDCGHAP DSFSYLALIR
0901: AYTEAKLYTE AEEAIRTMTL SSSNTTPSCP HFSHLILAFL KEGRVGEARR IYGQMMEVGV APDLACCRAM MRVYVDRGLV DDGISLYETT CGSLKPDSFV
1001: LSAAFHLYER AGRECEAQGV LESISASGTS FLRNMKIGFG SSLRS
0001: MKSDFLTSTT HFNPSIFLPK IPSRNSRISI KSSSSSSKVR PDPWSLSDGN PEKPKPRYER PKHPLSDDDA RRIIKKKAQY LSTLRRNQGS QAMTPKWIKR
0101: TPEQMVQYLE DDRNGQMYGK HVVAAIKTVR GLSQRRQGSD DMRFVMSSFV AKLSFRDMCV VLKEQRGWRQ VRDFFSWMKL QLSYRPSVVV YTIVLRLYGQ
0201: VGKIKMAEET FLEMLEVGCE PDAVACGTML CTYARWGRHS AMLTFYKAVQ ERRILLSTSV YNFMLSSLQK KSFHGKVIDL WLEMVEEGVP PNEFTYTLVV
0301: SSYAKQGFKE EALKAFGEMK SLGFVPEEVT YSSVISLSVK AGDWEKAIGL YEDMRSQGIV PSNYTCATML SLYYKTENYP KALSLFADME RNKIPADEVI
0401: RGLIIRIYGK LGLFHDAQSM FEETERLNLL ADEKTYLAMS QVHLNSGNVV KALDVIEMMK TRDIPLSRFA YIVMLQCYAK IQNVDCAEEA FRALSKTGLP
0501: DASSCNDMLN LYTRLNLGEK AKGFIKQIMV DQVHFDIELY KTAMRVYCKE GMVAEAQDLI VKMGREARVK DNRFVQTLAE SMHIVNKHDK HEAVLNVSQL
0601: DVMALGLMLN LRLKEGNLNE TKAILNLMFK TDLGSSAVNR VISSFVREGD VSKAEMIADI IIRLGLRMEE ETIATLIAVY GRQHKLKEAK RLYLAAGESK
0701: TPGKSVIRSM IDAYVRCGWL EDAYGLFMES AEKGCDPGAV TISILVNALT NRGKHREAEH ISRTCLEKNI ELDTVGYNTL IKAMLEAGKL QCASEIYERM
0801: HTSGVPCSIQ TYNTMISVYG RGLQLDKAIE IFSNARRSGL YLDEKIYTNM IMHYGKGGKM SEALSLFSEM QKKGIKPGTP SYNMMVKICA TSRLHHEVDE
0901: LLQAMERNGR CTDLSTYLTL IQVYAESSQF AEAEKTITLV KEKGIPLSHS HFSSLLSALV KAGMMEEAER TYCKMSEAGI SPDSACKRTI LKGYMTCGDA
1001: EKGILFYEKM IRSSVEDDRF VSSVVEDLYK AVGKEQDV
0101: TPEQMVQYLE DDRNGQMYGK HVVAAIKTVR GLSQRRQGSD DMRFVMSSFV AKLSFRDMCV VLKEQRGWRQ VRDFFSWMKL QLSYRPSVVV YTIVLRLYGQ
0201: VGKIKMAEET FLEMLEVGCE PDAVACGTML CTYARWGRHS AMLTFYKAVQ ERRILLSTSV YNFMLSSLQK KSFHGKVIDL WLEMVEEGVP PNEFTYTLVV
0301: SSYAKQGFKE EALKAFGEMK SLGFVPEEVT YSSVISLSVK AGDWEKAIGL YEDMRSQGIV PSNYTCATML SLYYKTENYP KALSLFADME RNKIPADEVI
0401: RGLIIRIYGK LGLFHDAQSM FEETERLNLL ADEKTYLAMS QVHLNSGNVV KALDVIEMMK TRDIPLSRFA YIVMLQCYAK IQNVDCAEEA FRALSKTGLP
0501: DASSCNDMLN LYTRLNLGEK AKGFIKQIMV DQVHFDIELY KTAMRVYCKE GMVAEAQDLI VKMGREARVK DNRFVQTLAE SMHIVNKHDK HEAVLNVSQL
0601: DVMALGLMLN LRLKEGNLNE TKAILNLMFK TDLGSSAVNR VISSFVREGD VSKAEMIADI IIRLGLRMEE ETIATLIAVY GRQHKLKEAK RLYLAAGESK
0701: TPGKSVIRSM IDAYVRCGWL EDAYGLFMES AEKGCDPGAV TISILVNALT NRGKHREAEH ISRTCLEKNI ELDTVGYNTL IKAMLEAGKL QCASEIYERM
0801: HTSGVPCSIQ TYNTMISVYG RGLQLDKAIE IFSNARRSGL YLDEKIYTNM IMHYGKGGKM SEALSLFSEM QKKGIKPGTP SYNMMVKICA TSRLHHEVDE
0901: LLQAMERNGR CTDLSTYLTL IQVYAESSQF AEAEKTITLV KEKGIPLSHS HFSSLLSALV KAGMMEEAER TYCKMSEAGI SPDSACKRTI LKGYMTCGDA
1001: EKGILFYEKM IRSSVEDDRF VSSVVEDLYK AVGKEQDV
Arabidopsis Description
EMB976Pentatricopeptide repeat-containing protein At5g27270 [Source:UniProtKB/Swiss-Prot;Acc:O04647]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.