Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G317500.5 | Wheat | plastid | 87.68 | 81.05 |
| TraesCS6A01G337000.4 | Wheat | plastid | 87.58 | 80.88 |
| TraesCS6B01G367600.5 | Wheat | plastid | 86.85 | 80.44 |
| TraesCS7A01G074100.1 | Wheat | mitochondrion | 57.14 | 79.42 |
| TraesCS7D01G068900.1 | Wheat | cytosol | 64.18 | 77.6 |
| OQU75712 | Sorghum | plastid | 44.31 | 62.21 |
| Os06t0111300-00 | Rice | plastid | 37.16 | 60.03 |
| Zm00001d045550_P002 | Maize | plastid | 64.29 | 59.43 |
| GSMUA_AchrUn_... | Banana | cytosol, plastid | 54.24 | 51.37 |
| VIT_16s0039g02130.t01 | Wine grape | plastid | 49.48 | 44.63 |
| CDX80666 | Canola | plastid | 43.89 | 42.32 |
| Solyc03g097000.2.1 | Tomato | plastid | 46.07 | 41.78 |
| PGSC0003DMT400008145 | Potato | plastid | 45.76 | 41.5 |
| CDX86171 | Canola | cytosol, mitochondrion | 43.27 | 41.06 |
| KRH42711 | Soybean | plastid | 45.45 | 40.69 |
| AT5G27270.1 | Thale cress | plastid | 42.75 | 39.79 |
| Bra009971.1-P | Field mustard | cytosol, mitochondrion | 43.06 | 39.17 |
| HORVU5Hr1G064130.1 | Barley | plastid | 16.87 | 17.51 |
| HORVU7Hr1G033940.1 | Barley | cytosol | 17.91 | 13.75 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | UniProt:A0A287DWL9 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:HORVU0Hr1G005920 | EnsemblPlants:HORVU0Hr1G005920.1 | InterPro:IPR002885 | InterPro:IPR011990 | PFAM:PF01535 |
| PFAM:PF13041 | PFAM:PF17177 | InterPro:PPR_long | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF321 |
| InterPro:Pentatricopeptide_repeat | SUPFAM:SSF48452 | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI000B46F4BC | SEG:seg |
Description
No Description!
Coordinates
chrchrUn:+:31859514..31863344
Molecular Weight (calculated)
104629.0 Da
IEP (calculated)
6.907
GRAVY (calculated)
-0.111
Length
966 amino acids
Sequence
(BLAST)
(BLAST)
001: MRILTIESRX XXXXXXXXXX XXXXXXXXXX XXXXXXXXPK RPRWVRRTEG QMARYVEDDR AGHVHGRHVV AAARAARATA SRPPAGGSTM REAMASFVAK
101: LTFREMCVVL REQRGWRQAH DFFSWMKLQL CYEPSVVAYT ILLRAYGNAG KIELAEEAFL EMLEAGVEPD AVACGTLLCA YARRGRHGDM MLFYKATCRR
201: GVVPPMSAFN FMLSSLQKHR LHGKVIHLWK HMMEMEEANN VVPNHFTYTV VIGSFVKEGL LEESMQVLGK MRMSRLVPEE ATYSSLISLS ARHGRGEHAV
301: MLYEEMRAHG IVPSNYTCAS LLALYDKSED YSKALSLFSE MERSRVVIDE VIYGILIRIY GKIGLYDDAQ RTFEEIDNAG LLSDEQTYVA MAQVHMNAGN
401: YDRALLVMGS MRSRNVTPSL FSYSSLLRCH VVMEDIAAAE EAFRALCKYG LPDVFCCNDL LRLYFKLGQL EKASAFILNM RKEDIQLDEA LCMTVMEVCC
501: KSGMIADADK ILKEMNNGGV TMKSSTMVSM IEMYARNRTS VMQEQDTSPK ALAYRTDSSA LNATLKSLLD TPGGSSIACQ LIRKFAREGS ACVAKFLHEQ
601: LTELGVKPED SATATLIVQY GQEQKLDQAE ELFESASTSF PKGGPVYNAM VDALCKCGKI EEAYHLFMKM ADQGHSRDVV TISILVTHLT KHGKLYSAAS
701: IYDRMIFSGV PRSLQTFNIM ISVYGLGGKL EKATEMFTAA QELGLPIDEK LYTNMLNFYG KAGRHQDASL LFNRMKEQGI MPGKISFNSM INAYATSGLH
801: DDAEIVFQEM HSHGQVPDSM TYLALIRAYS ESRCYSKAEE TIQNMLGSGI TPSCPHFSHL IFAFLTEGQI DEAQRICSQM QEIGVAVDLA CCRAMMRAYL
901: EHGRVEEGIS LFETTRGSLK PDSFILSAAF HLYEHSGREP EAGDVLDAMG LHGASFLRSL KVGTKL
101: LTFREMCVVL REQRGWRQAH DFFSWMKLQL CYEPSVVAYT ILLRAYGNAG KIELAEEAFL EMLEAGVEPD AVACGTLLCA YARRGRHGDM MLFYKATCRR
201: GVVPPMSAFN FMLSSLQKHR LHGKVIHLWK HMMEMEEANN VVPNHFTYTV VIGSFVKEGL LEESMQVLGK MRMSRLVPEE ATYSSLISLS ARHGRGEHAV
301: MLYEEMRAHG IVPSNYTCAS LLALYDKSED YSKALSLFSE MERSRVVIDE VIYGILIRIY GKIGLYDDAQ RTFEEIDNAG LLSDEQTYVA MAQVHMNAGN
401: YDRALLVMGS MRSRNVTPSL FSYSSLLRCH VVMEDIAAAE EAFRALCKYG LPDVFCCNDL LRLYFKLGQL EKASAFILNM RKEDIQLDEA LCMTVMEVCC
501: KSGMIADADK ILKEMNNGGV TMKSSTMVSM IEMYARNRTS VMQEQDTSPK ALAYRTDSSA LNATLKSLLD TPGGSSIACQ LIRKFAREGS ACVAKFLHEQ
601: LTELGVKPED SATATLIVQY GQEQKLDQAE ELFESASTSF PKGGPVYNAM VDALCKCGKI EEAYHLFMKM ADQGHSRDVV TISILVTHLT KHGKLYSAAS
701: IYDRMIFSGV PRSLQTFNIM ISVYGLGGKL EKATEMFTAA QELGLPIDEK LYTNMLNFYG KAGRHQDASL LFNRMKEQGI MPGKISFNSM INAYATSGLH
801: DDAEIVFQEM HSHGQVPDSM TYLALIRAYS ESRCYSKAEE TIQNMLGSGI TPSCPHFSHL IFAFLTEGQI DEAQRICSQM QEIGVAVDLA CCRAMMRAYL
901: EHGRVEEGIS LFETTRGSLK PDSFILSAAF HLYEHSGREP EAGDVLDAMG LHGASFLRSL KVGTKL
0001: MKSDFLTSTT HFNPSIFLPK IPSRNSRISI KSSSSSSKVR PDPWSLSDGN PEKPKPRYER PKHPLSDDDA RRIIKKKAQY LSTLRRNQGS QAMTPKWIKR
0101: TPEQMVQYLE DDRNGQMYGK HVVAAIKTVR GLSQRRQGSD DMRFVMSSFV AKLSFRDMCV VLKEQRGWRQ VRDFFSWMKL QLSYRPSVVV YTIVLRLYGQ
0201: VGKIKMAEET FLEMLEVGCE PDAVACGTML CTYARWGRHS AMLTFYKAVQ ERRILLSTSV YNFMLSSLQK KSFHGKVIDL WLEMVEEGVP PNEFTYTLVV
0301: SSYAKQGFKE EALKAFGEMK SLGFVPEEVT YSSVISLSVK AGDWEKAIGL YEDMRSQGIV PSNYTCATML SLYYKTENYP KALSLFADME RNKIPADEVI
0401: RGLIIRIYGK LGLFHDAQSM FEETERLNLL ADEKTYLAMS QVHLNSGNVV KALDVIEMMK TRDIPLSRFA YIVMLQCYAK IQNVDCAEEA FRALSKTGLP
0501: DASSCNDMLN LYTRLNLGEK AKGFIKQIMV DQVHFDIELY KTAMRVYCKE GMVAEAQDLI VKMGREARVK DNRFVQTLAE SMHIVNKHDK HEAVLNVSQL
0601: DVMALGLMLN LRLKEGNLNE TKAILNLMFK TDLGSSAVNR VISSFVREGD VSKAEMIADI IIRLGLRMEE ETIATLIAVY GRQHKLKEAK RLYLAAGESK
0701: TPGKSVIRSM IDAYVRCGWL EDAYGLFMES AEKGCDPGAV TISILVNALT NRGKHREAEH ISRTCLEKNI ELDTVGYNTL IKAMLEAGKL QCASEIYERM
0801: HTSGVPCSIQ TYNTMISVYG RGLQLDKAIE IFSNARRSGL YLDEKIYTNM IMHYGKGGKM SEALSLFSEM QKKGIKPGTP SYNMMVKICA TSRLHHEVDE
0901: LLQAMERNGR CTDLSTYLTL IQVYAESSQF AEAEKTITLV KEKGIPLSHS HFSSLLSALV KAGMMEEAER TYCKMSEAGI SPDSACKRTI LKGYMTCGDA
1001: EKGILFYEKM IRSSVEDDRF VSSVVEDLYK AVGKEQDV
0101: TPEQMVQYLE DDRNGQMYGK HVVAAIKTVR GLSQRRQGSD DMRFVMSSFV AKLSFRDMCV VLKEQRGWRQ VRDFFSWMKL QLSYRPSVVV YTIVLRLYGQ
0201: VGKIKMAEET FLEMLEVGCE PDAVACGTML CTYARWGRHS AMLTFYKAVQ ERRILLSTSV YNFMLSSLQK KSFHGKVIDL WLEMVEEGVP PNEFTYTLVV
0301: SSYAKQGFKE EALKAFGEMK SLGFVPEEVT YSSVISLSVK AGDWEKAIGL YEDMRSQGIV PSNYTCATML SLYYKTENYP KALSLFADME RNKIPADEVI
0401: RGLIIRIYGK LGLFHDAQSM FEETERLNLL ADEKTYLAMS QVHLNSGNVV KALDVIEMMK TRDIPLSRFA YIVMLQCYAK IQNVDCAEEA FRALSKTGLP
0501: DASSCNDMLN LYTRLNLGEK AKGFIKQIMV DQVHFDIELY KTAMRVYCKE GMVAEAQDLI VKMGREARVK DNRFVQTLAE SMHIVNKHDK HEAVLNVSQL
0601: DVMALGLMLN LRLKEGNLNE TKAILNLMFK TDLGSSAVNR VISSFVREGD VSKAEMIADI IIRLGLRMEE ETIATLIAVY GRQHKLKEAK RLYLAAGESK
0701: TPGKSVIRSM IDAYVRCGWL EDAYGLFMES AEKGCDPGAV TISILVNALT NRGKHREAEH ISRTCLEKNI ELDTVGYNTL IKAMLEAGKL QCASEIYERM
0801: HTSGVPCSIQ TYNTMISVYG RGLQLDKAIE IFSNARRSGL YLDEKIYTNM IMHYGKGGKM SEALSLFSEM QKKGIKPGTP SYNMMVKICA TSRLHHEVDE
0901: LLQAMERNGR CTDLSTYLTL IQVYAESSQF AEAEKTITLV KEKGIPLSHS HFSSLLSALV KAGMMEEAER TYCKMSEAGI SPDSACKRTI LKGYMTCGDA
1001: EKGILFYEKM IRSSVEDDRF VSSVVEDLYK AVGKEQDV
Arabidopsis Description
EMB976Pentatricopeptide repeat-containing protein At5g27270 [Source:UniProtKB/Swiss-Prot;Acc:O04647]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.