Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P24290_001 | Banana | nucleus | 78.87 | 82.28 |
| VIT_05s0077g01180.t01 | Wine grape | nucleus | 75.09 | 76.25 |
| KRH50753 | Soybean | nucleus | 69.81 | 71.43 |
| KRH02335 | Soybean | nucleus | 69.06 | 70.66 |
| Solyc01g060030.2.1 | Tomato | nucleus | 68.68 | 68.68 |
| KXG36793 | Sorghum | nucleus | 68.3 | 67.29 |
| Zm00001d006930_P001 | Maize | nucleus | 66.42 | 65.92 |
| Os11t0199600-02 | Rice | nucleus | 66.42 | 64.47 |
| TraesCS7A01G422700.1 | Wheat | nucleus | 61.13 | 60.67 |
| TraesCS7D01G415100.1 | Wheat | nucleus | 60.75 | 60.53 |
| TraesCS7B01G323100.1 | Wheat | nucleus | 60.75 | 60.3 |
| HORVU7Hr1G097780.1 | Barley | nucleus | 60.38 | 60.15 |
| Bra010037.1-P | Field mustard | nucleus | 63.4 | 60.0 |
| CDX86235 | Canola | nucleus | 63.4 | 60.0 |
| CDX85408 | Canola | nucleus | 63.4 | 59.57 |
| AT5G49400.1 | Thale cress | nucleus | 61.51 | 59.27 |
| Bra020636.1-P | Field mustard | nucleus | 61.13 | 58.7 |
| TraesCS5A01G022300.1 | Wheat | nucleus | 56.98 | 57.85 |
| Zm00001d022296_P001 | Maize | nucleus | 45.28 | 54.05 |
| Os07t0640401-00 | Rice | nucleus | 10.57 | 43.08 |
| CDY05631 | Canola | nucleus | 59.62 | 36.41 |
| CDY33903 | Canola | nucleus | 58.49 | 35.96 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P25320_001 | EnsemblPlants:GSMUA_Achr11T25320_001 | EnsemblPlantsGene:GSMUA_Achr11G25320_001 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0008270 | PANTHER:PTHR13491 | PFAM:PF13917 | SEG:seg | UniParc:UPI0002949566 | UniProt:M0RVB2 |
| MapMan:35.2 | : | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G25320_001]
Coordinates
chr11:-:24488246..24489240
Molecular Weight (calculated)
29845.1 Da
IEP (calculated)
10.433
GRAVY (calculated)
-1.497
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSKKEEKAQ AAAERIKAAA LSAAKGLSRA QAERAAAAAA RNVNAYGQKE EGPSRWQERK EAKRQMYLMS TEKAVKLGER KDIKSSVSSA GVTSQCQKCY
101: QAGHWTYECK NERVYISRPS RTQQLKNPKL KMTLSVSYEL DNPDIGKEVR DEGRDKKESW GKNGTKSKRK HRSGTDSDED SSEASVFETD SESSVTGSED
201: SSGESSYSSS SSDSEERRRR RKKHKKRRHR RDSSSSDSSE TESASDSDSD EKISRRKSRR HSRRR
101: QAGHWTYECK NERVYISRPS RTQQLKNPKL KMTLSVSYEL DNPDIGKEVR DEGRDKKESW GKNGTKSKRK HRSGTDSDED SSEASVFETD SESSVTGSED
201: SSGESSYSSS SSDSEERRRR RKKHKKRRHR RDSSSSDSSE TESASDSDSD EKISRRKSRR HSRRR
001: MSNSKDEKSQ DAADRIKAAT LTAAKGLSRT QAERAAAAAA RNVNAYGQKE EGPSRWQEKR ELKRQMYLMS TEKAVRLGER KDKTMSASAV GSSASAASQC
101: QKCFQAGHWT YECKNERVYI SRPSRTQQLK NPKLRTKPSV DDLDGSDDDD EEERPDATNG KAEVEKRSKK SKRKHRSKSD SESDSEASVF ETDSDGSSGE
201: SSSEYSSSSD SEDERRRRRK AKKSKKKQKQ RKERRRRYSS SSSESSESES ASDSDSDEDR SRRKKKSKRH SNKRR
101: QKCFQAGHWT YECKNERVYI SRPSRTQQLK NPKLRTKPSV DDLDGSDDDD EEERPDATNG KAEVEKRSKK SKRKHRSKSD SESDSEASVF ETDSDGSSGE
201: SSSEYSSSSD SEDERRRRRK AKKSKKKQKQ RKERRRRYSS SSSESSESES ASDSDSDEDR SRRKKKSKRH SNKRR
Arabidopsis Description
At5g49400 [Source:UniProtKB/TrEMBL;Acc:Q6NMK2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.