Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g005630.1.1 | Tomato | nucleus | 37.5 | 42.31 |
| VIT_06s0004g00490.t01 | Wine grape | nucleus | 41.67 | 40.74 |
| GSMUA_Achr3P12350_001 | Banana | mitochondrion | 19.32 | 39.53 |
| Bra002262.1-P | Field mustard | nucleus | 37.88 | 39.37 |
| CDX92500 | Canola | nucleus | 37.88 | 39.37 |
| CDY35855 | Canola | nucleus | 37.88 | 39.22 |
| AT5G19790.1 | Thale cress | nucleus | 37.5 | 39.13 |
| Bra006518.1-P | Field mustard | nucleus | 36.74 | 38.65 |
| CDX88874 | Canola | nucleus | 36.36 | 37.94 |
| CDY42296 | Canola | nucleus | 36.36 | 37.94 |
| Bra020063.1-P | Field mustard | nucleus | 35.98 | 37.85 |
| CDY44943 | Canola | nucleus | 35.98 | 37.85 |
| CDX70891 | Canola | nucleus | 35.98 | 37.4 |
| KRH58943 | Soybean | nucleus | 30.68 | 32.53 |
| GSMUA_Achr4P28070_001 | Banana | nucleus | 33.71 | 23.92 |
Protein Annotations
| MapMan:15.5.7.1 | MapMan:26.9.1.7 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0000302 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009723 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0035865 | GO:GO:0043565 |
| GO:GO:0048528 | EnsemblPlantsGene:GSMUA_Achr4G28640_001 | EnsemblPlants:GSMUA_Achr4P28640_001 | EnsemblPlants:GSMUA_Achr4T28640_001 | InterPro:IPR001471 | InterPro:IPR036955 |
| UniProt:M0SSX6 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF20 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000296ED8E | SEG:seg | : | : |
Description
Putative Ethylene-responsive transcription factor RAP2-11 [Source:GMGC_GENE;Acc:GSMUA_Achr4G28640_001]
Coordinates
chr4:-:26987978..26988772
Molecular Weight (calculated)
29196.1 Da
IEP (calculated)
6.032
GRAVY (calculated)
-0.527
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIHFQPQRH PRQIPVCKPA SRSKKRSKSS SSSKFVGVRQ RPSGRWVAEI KDTTQKIRMW LGTFETAEEA ARAYDEAACL LRGSNTRTNF ITHVATDSPL
101: ASRIQNLLNL KKQTTSASNP SASNSSPCDP SATCTGASSA ASSSIEPESC TSNNSLGSVA SCLEIQQDIS QMADEVYRPC FSNGGEDLEF WSSSPLPSDS
201: WLFDCLELPK VGPEISEFER MKVERQFSAS LYAMNGVQEY FDMVHDPSDT LWDLPPLCHL PCRT
101: ASRIQNLLNL KKQTTSASNP SASNSSPCDP SATCTGASSA ASSSIEPESC TSNNSLGSVA SCLEIQQDIS QMADEVYRPC FSNGGEDLEF WSSSPLPSDS
201: WLFDCLELPK VGPEISEFER MKVERQFSAS LYAMNGVQEY FDMVHDPSDT LWDLPPLCHL PCRT
001: MEHQTTPKQK TKEKSKGNKT KFVGVRQRPS GKWVAEIKDT TQKIRMWLGT FETAEEAARA YDEAACLLRG SNTRTNFANH FPNNSQLSLK IRNLLHQKQS
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
Arabidopsis Description
RAP2-11Ethylene-responsive transcription factor RAP2-11 [Source:UniProtKB/Swiss-Prot;Acc:Q6J9S1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.