Factsheet for HORVU1Hr1G081990.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G349500.1	Wheat	cytosol	88.39	88.39
TraesCS1A01G346700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	86.45	88.16
TraesCS1B01G360600.1	Wheat	cytosol, mitochondrion, nucleus, plastid	88.06	88.06
Zm00001d038769_P003	Maize	cytosol	64.84	67.22
KXG22385	Sorghum	cytosol	63.23	65.55
Os05t0526300-02	Rice	cytosol	64.84	65.26
GSMUA_Achr1P05030_001	Banana	cytosol	36.45	37.67
AT5G52880.1	Thale cress	cytosol	31.94	36.8
VIT_16s0050g01810.t01	Wine grape	cytosol	35.48	36.79
PGSC0003DMT400051396	Potato	nucleus	33.55	35.74
KRH35221	Soybean	cytosol	32.9	35.66
Solyc03g007750.2.1	Tomato	nucleus	33.23	35.15
Bra003105.1-P	Field mustard	nucleus	31.94	34.98
Bra003103.1-P	Field mustard	cytosol	29.35	31.27
KRG91603	Soybean	cytosol	26.77	28.62

Protein Annotations

EnsemblPlants:HORVU1Hr1G081990.4	EnsemblPlantsGene:HORVU1Hr1G081990	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	PANTHER:PTHR20995	PANTHER:PTHR20995:SF27	PFAM:PF12937
PFscan:PS50181	SEG:seg	SMART:SM00256	SUPFAM:SSF81383	UniParc:UPI000B4715B0	UniProt:A0A287GHF2
MapMan:19.2.2.8.1.4.6	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:528529051..528532448

Molecular Weight (calculated)

34518.0 Da

IEP (calculated)

9.088

GRAVY (calculated)

-0.347

Length

310 amino acids

Sequence
(BLAST)

001: MPVRRRAPRP QDTGAVKRYT EMGIAAALSR PWDYPTACRE LAELLRHGYA GLPKAAQALA AADVLVAFRR LPDVQTEHAL AAANGLLLAV EASLPKQKKS
101: QAVSEFKYSV ILHKRRAKVQ QEPGPPHIPN DVLIHIFSFL DMRSLVAASL VCWPWNSSAN DSKLWKTNYS LFFSASHLSS NSTPVSSGIQ NSHALLVQNN
201: VDPVFDDPNL NWKEVFRNKH AECISWSASS NRAICQQCRS ILWLSNLTCA APHHCPKKGR DEVKLMPMLP YAVACYILNA HDRPSSSSDS EDTDSDSENN
301: VPRRLWNSRV

Best Arabidopsis Sequence Match ( AT5G52880.1 )
(BLAST)

001: MKRYQNLKVG EAFSKNRIYP FACNELSSIL NLAYSLSPKN VKALIFQDTL SAFRLLPDIN TSAAVSAANL LLKSVEAVLP KQKKNLAIVE FKQAKVALKR
101: RSKNREEEDI DIPSLPQDIL IHIFSFLEIS SLVSSAQVSR SWNQATHENS LWQSQFDLHF NHKVLIRMQS DIDWREAFKK AYIAANSSEA LRSGRGYCSY
201: CDSIVWHENL RCLNKQCRLK SGNKPLDLIT THQVVNYLLG IESSDDESES DDEAFPGRLW KLSYVPDYL

Arabidopsis Description

F-box protein At5g52880 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLX3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.