Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400051396 | Potato | nucleus | 91.81 | 92.44 |
| KRH35221 | Soybean | cytosol | 49.49 | 50.7 |
| VIT_16s0050g01810.t01 | Wine grape | cytosol | 48.46 | 47.49 |
| AT5G52880.1 | Thale cress | cytosol | 36.86 | 40.15 |
| Bra003105.1-P | Field mustard | nucleus | 38.23 | 39.58 |
| Bra003103.1-P | Field mustard | cytosol | 37.54 | 37.8 |
| KRG91603 | Soybean | cytosol | 37.2 | 37.59 |
| Zm00001d038769_P003 | Maize | cytosol | 36.86 | 36.12 |
| GSMUA_Achr1P05030_001 | Banana | cytosol | 36.86 | 36.0 |
| KXG22385 | Sorghum | cytosol | 36.18 | 35.45 |
| TraesCS1A01G346700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 35.49 | 34.21 |
| TraesCS1B01G360600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 35.84 | 33.87 |
| TraesCS1D01G349500.1 | Wheat | cytosol | 35.49 | 33.55 |
| Os05t0526300-02 | Rice | cytosol | 35.15 | 33.44 |
| HORVU1Hr1G081990.4 | Barley | cytosol | 35.15 | 33.23 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:19.2.2.8.1.4.6 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0000151 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0043161 | InterPro:IPR001810 |
| UniProt:K4BEJ7 | PFAM:PF12937 | PFscan:PS50181 | PANTHER:PTHR20995 | PANTHER:PTHR20995:SF27 | SMART:SM00256 |
| SUPFAM:SSF81383 | EnsemblPlantsGene:Solyc03g007750.2 | EnsemblPlants:Solyc03g007750.2.1 | UniParc:UPI000276831E | SEG:seg | : |
Description
No Description!
Coordinates
chr3:-:2273944..2278750
Molecular Weight (calculated)
32875.3 Da
IEP (calculated)
8.927
GRAVY (calculated)
-0.326
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGSMMERYQ KLGLKESLNQ PYRYPIACDE LSLILRNAYS KIPKKLQSLI FRESLTAFGL LPEMQTQAAI SAAHGLLQSM EAALPKQKKA LAASEFKQAM
101: VTHRRRRKVQ PVLEGRSQLP QDVLVHIFGF LDLKSLVTAS SVCRSWSVAA SDNHLWQSIH ISFFGKSNEI PNIIRFTNGV ERISFTLGNT GADNVDWKDA
201: FKRAYRGISK KVTSQRGFCK QCNSIVWLNN SKCSNGEISD EHQIMPVSLE QIVDYVIEES IPSSDSDSDS DDSVDGSLFK LWAYPKRVSE PHA
101: VTHRRRRKVQ PVLEGRSQLP QDVLVHIFGF LDLKSLVTAS SVCRSWSVAA SDNHLWQSIH ISFFGKSNEI PNIIRFTNGV ERISFTLGNT GADNVDWKDA
201: FKRAYRGISK KVTSQRGFCK QCNSIVWLNN SKCSNGEISD EHQIMPVSLE QIVDYVIEES IPSSDSDSDS DDSVDGSLFK LWAYPKRVSE PHA
001: MKRYQNLKVG EAFSKNRIYP FACNELSSIL NLAYSLSPKN VKALIFQDTL SAFRLLPDIN TSAAVSAANL LLKSVEAVLP KQKKNLAIVE FKQAKVALKR
101: RSKNREEEDI DIPSLPQDIL IHIFSFLEIS SLVSSAQVSR SWNQATHENS LWQSQFDLHF NHKVLIRMQS DIDWREAFKK AYIAANSSEA LRSGRGYCSY
201: CDSIVWHENL RCLNKQCRLK SGNKPLDLIT THQVVNYLLG IESSDDESES DDEAFPGRLW KLSYVPDYL
101: RSKNREEEDI DIPSLPQDIL IHIFSFLEIS SLVSSAQVSR SWNQATHENS LWQSQFDLHF NHKVLIRMQS DIDWREAFKK AYIAANSSEA LRSGRGYCSY
201: CDSIVWHENL RCLNKQCRLK SGNKPLDLIT THQVVNYLLG IESSDDESES DDEAFPGRLW KLSYVPDYL
Arabidopsis Description
F-box protein At5g52880 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLX3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.