Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d038769_P003 | Maize | cytosol | 72.73 | 74.92 |
| KXG22385 | Sorghum | cytosol | 71.43 | 73.58 |
| TraesCS1D01G349500.1 | Wheat | cytosol | 66.23 | 65.81 |
| TraesCS1A01G346700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 64.61 | 65.46 |
| HORVU1Hr1G081990.4 | Barley | cytosol | 65.26 | 64.84 |
| TraesCS1B01G360600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 64.94 | 64.52 |
| GSMUA_Achr1P05030_001 | Banana | cytosol | 41.23 | 42.33 |
| KRH35221 | Soybean | cytosol | 36.69 | 39.51 |
| VIT_16s0050g01810.t01 | Wine grape | cytosol | 37.66 | 38.8 |
| AT5G52880.1 | Thale cress | cytosol | 32.79 | 37.55 |
| Solyc03g007750.2.1 | Tomato | nucleus | 33.44 | 35.15 |
| PGSC0003DMT400051396 | Potato | nucleus | 33.12 | 35.05 |
| Bra003105.1-P | Field mustard | nucleus | 32.14 | 34.98 |
| KRG91603 | Soybean | cytosol | 30.19 | 32.07 |
| Bra003103.1-P | Field mustard | cytosol | 30.19 | 31.96 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:19.2.2.8.1.4.6 | EntrezGene:9266102 | ProteinID:AAU44061.1 | EMBL:AK099438 | ProteinID:BAS94989.1 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001810 |
| EnsemblPlantsGene:Os05g0526300 | EnsemblPlants:Os05t0526300-02 | PFAM:PF12937 | PFscan:PS50181 | PANTHER:PTHR20995 | PANTHER:PTHR20995:SF27 |
| UniProt:Q65X90 | SMART:SM00256 | SUPFAM:SSF81383 | UniParc:UPI000043F473 | RefSeq:XP_015637438.1 | SEG:seg |
Description
F-box protein 268Similar to F-box domain containing protein. (Os05t0526300-01);Similar to F-box domain containing protein. (Os05t0526300-02)
Coordinates
chr5:+:26177405..26179773
Molecular Weight (calculated)
34194.4 Da
IEP (calculated)
7.207
GRAVY (calculated)
-0.290
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVRRRQPRR RETGAAERYR EMGISAALSR PWDYPTACGE IAALLRIGYG DLPKAAQALV AGDVLLAFRL LPDVQTGYAL SAANGLLQAV DGSLPKQKKA
101: QAVSEFKRSV VAHKRRARVQ QDPGVPHIPY DVLVHIFSFL DMRSLVAAGL VCWPWNSAAN DNHLWEMNYS LFFGICHINC NSTPTAGNVQ NTDYHVQNSI
201: YQVSPDPGFN WKEAFHKKYA EQETWSSASN RALCGYCRSV IWLCDLTCAT PHYCLNNGKD GVKLGPLLPH TVADYILDIA DLAASSTESD DTDSDSENYP
301: QARFWSLS
101: QAVSEFKRSV VAHKRRARVQ QDPGVPHIPY DVLVHIFSFL DMRSLVAAGL VCWPWNSAAN DNHLWEMNYS LFFGICHINC NSTPTAGNVQ NTDYHVQNSI
201: YQVSPDPGFN WKEAFHKKYA EQETWSSASN RALCGYCRSV IWLCDLTCAT PHYCLNNGKD GVKLGPLLPH TVADYILDIA DLAASSTESD DTDSDSENYP
301: QARFWSLS
001: MKRYQNLKVG EAFSKNRIYP FACNELSSIL NLAYSLSPKN VKALIFQDTL SAFRLLPDIN TSAAVSAANL LLKSVEAVLP KQKKNLAIVE FKQAKVALKR
101: RSKNREEEDI DIPSLPQDIL IHIFSFLEIS SLVSSAQVSR SWNQATHENS LWQSQFDLHF NHKVLIRMQS DIDWREAFKK AYIAANSSEA LRSGRGYCSY
201: CDSIVWHENL RCLNKQCRLK SGNKPLDLIT THQVVNYLLG IESSDDESES DDEAFPGRLW KLSYVPDYL
101: RSKNREEEDI DIPSLPQDIL IHIFSFLEIS SLVSSAQVSR SWNQATHENS LWQSQFDLHF NHKVLIRMQS DIDWREAFKK AYIAANSSEA LRSGRGYCSY
201: CDSIVWHENL RCLNKQCRLK SGNKPLDLIT THQVVNYLLG IESSDDESES DDEAFPGRLW KLSYVPDYL
Arabidopsis Description
F-box protein At5g52880 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLX3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.