Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG22385 | Sorghum | cytosol | 93.98 | 93.98 |
| Os05t0526300-02 | Rice | cytosol | 74.92 | 72.73 |
| HORVU1Hr1G081990.4 | Barley | cytosol | 67.22 | 64.84 |
| TraesCS1D01G349500.1 | Wheat | cytosol | 66.56 | 64.19 |
| TraesCS1A01G346700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 64.88 | 63.82 |
| TraesCS1B01G360600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 65.55 | 63.23 |
| GSMUA_Achr1P05030_001 | Banana | cytosol | 44.15 | 44.0 |
| KRH35221 | Soybean | cytosol | 39.46 | 41.26 |
| VIT_16s0050g01810.t01 | Wine grape | cytosol | 40.13 | 40.13 |
| AT5G52880.1 | Thale cress | cytosol | 34.11 | 37.92 |
| Solyc03g007750.2.1 | Tomato | nucleus | 36.12 | 36.86 |
| PGSC0003DMT400051396 | Potato | nucleus | 35.79 | 36.77 |
| Bra003105.1-P | Field mustard | nucleus | 34.11 | 36.04 |
| KRG91603 | Soybean | cytosol | 33.11 | 34.14 |
| Bra003103.1-P | Field mustard | cytosol | 31.77 | 32.65 |
Protein Annotations
| Gene3D:1.20.1280.50 | EntrezGene:100194037 | MapMan:19.2.2.8.1.4.6 | ProteinID:AQK87771.1 | UniProt:B4FH72 | EMBL:BT036460 |
| EMBL:EU974371 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001810 | PFAM:PF12937 | PFscan:PS50181 | PANTHER:PTHR20995 | PANTHER:PTHR20995:SF27 | SMART:SM00256 |
| SUPFAM:SSF81383 | UniParc:UPI00017B6960 | EnsemblPlantsGene:Zm00001d038769 | EnsemblPlants:Zm00001d038769_P003 | EnsemblPlants:Zm00001d038769_T003 | SEG:seg |
Description
F-box protein
Coordinates
chr6:-:164167102..164171933
Molecular Weight (calculated)
33625.1 Da
IEP (calculated)
8.882
GRAVY (calculated)
-0.239
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVRRRQPRR PETGAAERYR EMGIGAALSR PWDYPTACGE LAALLRLGYA DLPKAAQALV ASDVLLAFRL LPDVQTGYAV STANVLLQAV EVALPKQKKA
101: QAVSEFKHSI IAHKRRARVQ QISGSPHIPQ DILVHIFSFL DMHSLVAAGL VCWSWNSAAN DNKLWKMNYS IFFGLSHLSC NNIPVSGVQY STNSVPNYPN
201: FSWKESFHTK YAECASWKFV SNRALCAHCR SVIWLSNLTC ASPHHCPKNR HHEVKLRPLL PDTVAKYILR VEDLAASSSE SDDTDDSDYE NWHPRFWAL
101: QAVSEFKHSI IAHKRRARVQ QISGSPHIPQ DILVHIFSFL DMHSLVAAGL VCWSWNSAAN DNKLWKMNYS IFFGLSHLSC NNIPVSGVQY STNSVPNYPN
201: FSWKESFHTK YAECASWKFV SNRALCAHCR SVIWLSNLTC ASPHHCPKNR HHEVKLRPLL PDTVAKYILR VEDLAASSSE SDDTDDSDYE NWHPRFWAL
001: MKRYQNLKVG EAFSKNRIYP FACNELSSIL NLAYSLSPKN VKALIFQDTL SAFRLLPDIN TSAAVSAANL LLKSVEAVLP KQKKNLAIVE FKQAKVALKR
101: RSKNREEEDI DIPSLPQDIL IHIFSFLEIS SLVSSAQVSR SWNQATHENS LWQSQFDLHF NHKVLIRMQS DIDWREAFKK AYIAANSSEA LRSGRGYCSY
201: CDSIVWHENL RCLNKQCRLK SGNKPLDLIT THQVVNYLLG IESSDDESES DDEAFPGRLW KLSYVPDYL
101: RSKNREEEDI DIPSLPQDIL IHIFSFLEIS SLVSSAQVSR SWNQATHENS LWQSQFDLHF NHKVLIRMQS DIDWREAFKK AYIAANSSEA LRSGRGYCSY
201: CDSIVWHENL RCLNKQCRLK SGNKPLDLIT THQVVNYLLG IESSDDESES DDEAFPGRLW KLSYVPDYL
Arabidopsis Description
F-box protein At5g52880 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLX3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.