Factsheet for HORVU3Hr1G033920.10

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome
MultiLoc:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G166600.1	Wheat	golgi, peroxisome	98.07	98.31
TraesCS3B01G199500.1	Wheat	peroxisome	97.83	98.07
TraesCS3D01G175100.1	Wheat	peroxisome	97.83	98.07
Os01t0248400-01	Rice	plasma membrane	91.81	92.03
GSMUA_Achr7P14090_001	Banana	peroxisome	86.51	86.72
KRH43614	Soybean	peroxisome	79.52	84.62
KRH13828	Soybean	nucleus, peroxisome	84.34	84.13
VIT_19s0085g01150.t01	Wine grape	peroxisome	83.86	83.65
Bra003336.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	75.42	82.59
AT1G54340.1	Thale cress	peroxisome	81.45	81.25
CDX67740	Canola	cytoskeleton, cytosol, peroxisome	82.89	80.75
CDY46358	Canola	peroxisome	68.43	75.73
HORVU3Hr1G059060.2	Barley	mitochondrion	81.45	71.46
CDX98289	Canola	peroxisome	43.86	68.94
HORVU2Hr1G087970.8	Barley	cytosol	64.58	67.51

Protein Annotations

KEGG:00020+1.1.1.42	KEGG:00480+1.1.1.42	KEGG:00720+1.1.1.42	Gene3D:3.40.718.10	MapMan:50.1.1	UniProt:A0A287KQ52
GO:GO:0000166	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004450	GO:GO:0005488
GO:GO:0006091	GO:GO:0006099	GO:GO:0006102	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0016616	GO:GO:0046872	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:HORVU3Hr1G033920
EnsemblPlants:HORVU3Hr1G033920.10	InterPro:IsoCit/isopropylmalate_DH_CS	InterPro:IsoPropMal-DH-like_dom	InterPro:Isocitrate_DH_NADP	PFAM:PF00180	PIRSF:PIRSF000108
ScanProsite:PS00470	PANTHER:PTHR11822	PANTHER:PTHR11822:SF22	SMART:SM01329	SUPFAM:SSF53659	TIGRFAMs:TIGR00127
UniParc:UPI000B47A7E1	:	:	:	:	:

Description

Isocitrate dehydrogenase [NADP] [Source:UniProtKB/TrEMBL;Acc:A0A287KQ52]

Coordinates

chrchr3H:+:182124008..182129348

Molecular Weight (calculated)

46792.2 Da

IEP (calculated)

7.464

GRAVY (calculated)

-0.265

Length

415 amino acids

Sequence
(BLAST)

001: MAFEKIQVAN PIVEMDGDEM TRIIWKWIKD KLIFPFLDLD IKYFDLGLPN RDATGDKVTI ESAEATLKYN VAIKCATVTP DEGRVKEFNL KAMWRSPNGT
101: IRNILNGTVF REPIICKNVP RLVPGWTKPI CIGRHAFGDQ YRATDIIIRG TGKLKLIFDG IEEQIELDVF NFSGAGGVAL SMYNTDESIR AFAEASMNMA
201: YQKRWPLYLS TKNTILKKYD GRFKDIFQQN YETNWRCRFE DAGIWYEHRL IDDMVAYALK SEGGYVWACK NYDGDVQSDL IAQAGFGSLG LMTSVLVCPD
301: GRTVEAEAAH GTVTRHYRVH QKGGETSTNS IASIFAWSTG LAHRAKLDDN KRLLDFTQKL EAACVGTVES GKMTKDLALL IHGPTVSRDK YLNTMEFIDA
401: VAEELRTRLS AKSKL

Best Arabidopsis Sequence Match ( AT1G54340.1 )
(BLAST)

001: MEFEKIKVIN PVVEMDGDEM TRVIWKFIKD KLIFPFLELD IKYFDLGLPN RDFTDDKVTI ETAEATLKYN VAIKCATITP DEARVREFGL KKMWRSPNGT
101: IRNILNGTVF REPIICRNIP RLVPGWTKPI CIGRHAFGDQ YRATDLIVNE PGKLKLVFEP SGSSQKTEFE VFNFTGGGVA LAMYNTDESI RAFAESSMYT
201: AYQKKWPLYL STKNTILKIY DGRFKDIFQE VYEANWRSKY EAAGIWYEHR LIDDMVAYAM KSEGGYVWAC KNYDGDVQSD FLAQGYGSLG MMTSVLVCPD
301: GKTIEAEAAH GTVTRHYRVH QKGGETSTNS IASIFAWSRG LAHRAKLDSN AALLSYTEKL EAACMGTVES GKMTKDLALL IHGAKVRRDQ YVNTEEFIDA
401: VAWELKRRLL GNNSRL

Arabidopsis Description

ICDHPeroxisomal isocitrate dehydrogenase [NADP] [Source:UniProtKB/Swiss-Prot;Acc:Q9SLK0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.