Factsheet for TraesCS3D01G175100.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G166600.1	Wheat	golgi, peroxisome	99.76	99.76
TraesCS3B01G199500.1	Wheat	peroxisome	99.52	99.52
HORVU3Hr1G033920.10	Barley	peroxisome	98.07	97.83
Os01t0248400-01	Rice	plasma membrane	91.79	91.79
GSMUA_Achr7P14090_001	Banana	peroxisome	87.44	87.44
KRH43614	Soybean	peroxisome	80.19	85.13
KRH13828	Soybean	nucleus, peroxisome	85.02	84.62
VIT_19s0085g01150.t01	Wine grape	peroxisome	83.57	83.17
Bra003336.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	75.36	82.32
AT1G54340.1	Thale cress	peroxisome	81.64	81.25
CDX67740	Canola	cytoskeleton, cytosol, peroxisome	83.09	80.75
CDY46358	Canola	peroxisome	68.84	76.0
TraesCS3D01G237500.1	Wheat	plastid	81.88	75.17
CDX98289	Canola	peroxisome	44.2	69.32
TraesCS2D01G361100.1	Wheat	mitochondrion	76.09	66.18

Protein Annotations

KEGG:00020+1.1.1.42	KEGG:00480+1.1.1.42	KEGG:00720+1.1.1.42	Gene3D:3.40.718.10	MapMan:50.1.1	GO:GO:0000166
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004450	GO:GO:0005488	GO:GO:0006102
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114
InterPro:IsoCit/isopropylmalate_DH_CS	InterPro:IsoPropMal-DH-like_dom	InterPro:Isocitrate_DH_NADP	PFAM:PF00180	PIRSF:PIRSF000108	ScanProsite:PS00470
PANTHER:PTHR11822	PANTHER:PTHR11822:SF22	SMART:SM01329	SUPFAM:SSF53659	TIGRFAMs:TIGR00127	EnsemblPlantsGene:TraesCS3D01G175100
EnsemblPlants:TraesCS3D01G175100.1	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:157096690..157102058

Molecular Weight (calculated)

46600.7 Da

IEP (calculated)

6.634

GRAVY (calculated)

-0.286

Length

414 amino acids

Sequence
(BLAST)

001: MAFDKIQVAN PIVEMDGDEM TRIIWEWIKD KLIFPFLDLD IKYFDLGLPN RDATGDKVTI ESAEATLKYN VAIKCATVTP DEGRVKEFNL KAMWRSPNGT
101: IRNILNGTVF REPIICKNVP RLVPGWTKPI CIGRHAFGDQ YRATDTIIRG PGKLKLIFDG IEEQIELDVF NFSGAGGVAL SMYNTDESIR AFAEASMNVA
201: YQKRWPLYLS TKNTILKKYD GRFKDIFQEN YETNWRGRFE DAGIWYEHRL IDDMVAYALK SEGGYVWACK NYDGDVQSDL VAQGFGSLGL MTSVLVCPDG
301: RTVEAEAAHG TVTRHYRVHQ KGGETSTNSI ASIFAWSTGL AHRAKLDDNK RLLDFTQKLE AACVGTVESG KMTKDLALLI HGPTVSRDKY LNTMEFIDAV
401: AEELRTRLSA KSKL

Best Arabidopsis Sequence Match ( AT1G54340.1 )
(BLAST)

001: MEFEKIKVIN PVVEMDGDEM TRVIWKFIKD KLIFPFLELD IKYFDLGLPN RDFTDDKVTI ETAEATLKYN VAIKCATITP DEARVREFGL KKMWRSPNGT
101: IRNILNGTVF REPIICRNIP RLVPGWTKPI CIGRHAFGDQ YRATDLIVNE PGKLKLVFEP SGSSQKTEFE VFNFTGGGVA LAMYNTDESI RAFAESSMYT
201: AYQKKWPLYL STKNTILKIY DGRFKDIFQE VYEANWRSKY EAAGIWYEHR LIDDMVAYAM KSEGGYVWAC KNYDGDVQSD FLAQGYGSLG MMTSVLVCPD
301: GKTIEAEAAH GTVTRHYRVH QKGGETSTNS IASIFAWSRG LAHRAKLDSN AALLSYTEKL EAACMGTVES GKMTKDLALL IHGAKVRRDQ YVNTEEFIDA
401: VAWELKRRLL GNNSRL

Arabidopsis Description

ICDHPeroxisomal isocitrate dehydrogenase [NADP] [Source:UniProtKB/Swiss-Prot;Acc:Q9SLK0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.