CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13828	Soybean	nucleus, peroxisome	98.72	92.55
GSMUA_Achr4P00910_001	Banana	cytosol	87.18	82.93
GSMUA_Achr7P14090_001	Banana	peroxisome	87.69	82.61
VIT_19s0085g01150.t01	Wine grape	peroxisome	86.67	81.25
Os01t0248400-01	Rice	plasma membrane	85.64	80.68
GSMUA_Achr1P05110_001	Banana	cytosol	84.62	80.49
TraesCS3A01G166600.1	Wheat	golgi, peroxisome	85.38	80.43
TraesCS3D01G175100.1	Wheat	peroxisome	85.13	80.19
TraesCS3B01G199500.1	Wheat	peroxisome	85.13	80.19
HORVU3Hr1G033920.10	Barley	peroxisome	84.62	79.52
KRH17285	Soybean	endoplasmic reticulum, mitochondrion	83.85	79.18
KRH72930	Soybean	endoplasmic reticulum, nucleus	83.59	78.93
Bra003336.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	76.67	78.89
AT1G54340.1	Thale cress	peroxisome	83.08	77.88
CDX67740	Canola	cytoskeleton, cytosol, peroxisome	84.36	77.23
CDY46358	Canola	peroxisome	70.0	72.8
CDX98289	Canola	peroxisome	48.46	71.59
KRH56574	Soybean	nucleus	76.67	63.62
KRG93238	Soybean	cytosol	36.15	61.04

Protein Annotations

KEGG:00020+1.1.1.42	KEGG:00480+1.1.1.42	KEGG:00720+1.1.1.42	Gene3D:3.40.718.10	MapMan:50.1.1	EntrezGene:606295
UniProt:A0A0R0IMT3	EMBL:ACUP02004870	EnsemblPlantsGene:GLYMA_08G160500	GO:GO:0000166	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0004450	GO:GO:0005488	GO:GO:0006091	GO:GO:0006099	GO:GO:0006102
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016616	GO:GO:0046872
GO:GO:0051287	GO:GO:0055114	InterPro:IsoCit/isopropylmalate_DH_CS	InterPro:IsoPropMal-DH-like_dom	InterPro:Isocitrate_DH_NADP	EnsemblPlants:KRH43614
ProteinID:KRH43614	ProteinID:KRH43614.1	PFAM:PF00180	PIRSF:PIRSF000108	ScanProsite:PS00470	PANTHER:PTHR11822
PANTHER:PTHR11822:SF24	MetaCyc:PWY-5913	MetaCyc:PWY-6549	MetaCyc:PWY-6728	MetaCyc:PWY-6969	MetaCyc:PWY-7124
MetaCyc:PWY-7254	MetaCyc:PWY-7268	SMART:SM01329	SUPFAM:SSF53659	TIGRFAMs:TIGR00127	UniParc:UPI0006EE0FAC

Description

hypothetical protein

Coordinates

chr8:-:12421207..12428234

Molecular Weight (calculated)

43665.4 Da

IEP (calculated)

8.331

GRAVY (calculated)

-0.237

Length

390 amino acids

Sequence
(BLAST)

001: MGFQKIRVGN PIVEMDGDEM TRVIWKLIKD KLIFPYLELD IKYFDLGLPH RDATNDRVTI ESAEATLKYN VAIKCATITP GTVFREPIIC KNIPRLVSGW
101: TKPICIGRHA FGDQYRATDT VIKGPGKLKL VFAPSGNEGI KELEVYNFTG AGGIALSMYN TDESIRAFAE ASMNFAYQKK WPLYLSTKNT ILKKYDGRFK
201: DIFQEVFDTQ WNHKFKAAGI WYEHRLIDDM VAYALKSDGG YVWACKNYDG DVQSDFLAQG FGSLGLMTSV LVCPDGKTIE AEAAHGTVTR HYRVHQKGGE
301: TSTNSIASIF AWSRGLAHRA KLDGNARLLD FTEKLEAACI GTVELGKMTK DLALLVHGPK VSRSQYLNTE EFIDAVAEEL RTRLSSQSKL

Best Arabidopsis Sequence Match ( AT1G54340.1 )
(BLAST)

001: MEFEKIKVIN PVVEMDGDEM TRVIWKFIKD KLIFPFLELD IKYFDLGLPN RDFTDDKVTI ETAEATLKYN VAIKCATITP DEARVREFGL KKMWRSPNGT
101: IRNILNGTVF REPIICRNIP RLVPGWTKPI CIGRHAFGDQ YRATDLIVNE PGKLKLVFEP SGSSQKTEFE VFNFTGGGVA LAMYNTDESI RAFAESSMYT
201: AYQKKWPLYL STKNTILKIY DGRFKDIFQE VYEANWRSKY EAAGIWYEHR LIDDMVAYAM KSEGGYVWAC KNYDGDVQSD FLAQGYGSLG MMTSVLVCPD
301: GKTIEAEAAH GTVTRHYRVH QKGGETSTNS IASIFAWSRG LAHRAKLDSN AALLSYTEKL EAACMGTVES GKMTKDLALL IHGAKVRRDQ YVNTEEFIDA
401: VAWELKRRLL GNNSRL

Arabidopsis Description

ICDHPeroxisomal isocitrate dehydrogenase [NADP] [Source:UniProtKB/Swiss-Prot;Acc:Q9SLK0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.