CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56574	Soybean	nucleus	81.82	40.21
PGSC0003DMT400001262	Potato	cytosol	63.64	36.66
KRH43614	Soybean	peroxisome	61.04	36.15
KRH13828	Soybean	nucleus, peroxisome	64.5	35.82
KRH72930	Soybean	endoplasmic reticulum, nucleus	62.34	34.87
KRH17285	Soybean	endoplasmic reticulum, mitochondrion	61.9	34.62
Os04t0508200-01	Rice	plasma membrane, plastid	70.13	33.89
Solyc02g086610.2.1	Tomato	plastid	68.83	33.76
TraesCS2A01G363500.1	Wheat	mitochondrion	68.83	33.4
TraesCS2B01G381500.1	Wheat	mitochondrion	67.97	32.98
VIT_14s0066g00950.t01	Wine grape	mitochondrion	69.26	32.92
TraesCS2D01G361100.1	Wheat	mitochondrion	67.1	32.56
GSMUA_Achr2P23210_001	Banana	mitochondrion, plastid	69.26	32.52
CDX70573	Canola	mitochondrion, plastid	66.67	31.88
EES11093	Sorghum	mitochondrion	67.1	31.83
Bra006262.1-P	Field mustard	mitochondrion, plastid	66.23	31.68
CDX78585	Canola	mitochondrion, plastid	66.23	31.55
AT5G14590.1	Thale cress	mitochondrion, plastid	65.8	31.34
HORVU2Hr1G087970.8	Barley	cytosol	51.08	29.72
Zm00001d003083_P002	Maize	mitochondrion	61.9	28.43
GSMUA_Achr6P36990_001	Banana	mitochondrion	20.78	21.62
GSMUA_Achr5P00030_001	Banana	cytosol	3.03	9.33

Protein Annotations

KEGG:00020+1.1.1.42	KEGG:00480+1.1.1.42	KEGG:00720+1.1.1.42	Gene3D:3.40.718.10	MapMan:50.1.1	UniProt:A0A0R0EGP0
EMBL:ACUP02011545	EnsemblPlantsGene:GLYMA_19G005100	GO:GO:0003674	GO:GO:0003824	GO:GO:0004450	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006102	GO:GO:0008150
GO:GO:0008152	GO:GO:0009534	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009987
GO:GO:0016616	GO:GO:0055114	InterPro:IsoPropMal-DH-like_dom	InterPro:Isocitrate_DH_NADP	EnsemblPlants:KRG93238	ProteinID:KRG93238
ProteinID:KRG93238.1	PFAM:PF00180	PANTHER:PTHR11822	PANTHER:PTHR11822:SF5	MetaCyc:PWY-5913	MetaCyc:PWY-6549
MetaCyc:PWY-6728	MetaCyc:PWY-6969	MetaCyc:PWY-7124	MetaCyc:PWY-7254	MetaCyc:PWY-7268	SMART:SM01329
SUPFAM:SSF53659	UniParc:UPI0006ED8A72	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:466144..470978

Molecular Weight (calculated)

25976.5 Da

IEP (calculated)

7.505

GRAVY (calculated)

-0.181

Length

231 amino acids

Sequence
(BLAST)

001: MVRVAPQWSP QPLSEILSSS SLQLQPSFDR VPVLNPIVEM DGDEMTRIIW RMIKDKYFDL GLQNRDATDD RVTVESAEAT LEYNVAVKCA TITPVHSKGT
101: IRNILNGTVF REPIICHNIQ RIVSGWKKPI CIGRHAFGDQ YRATDAIITG SGKLKLVFGI AKLDNNEKLR EFTQKLEAAC VETVESGKMT KDLAILIHGP
201: KVSREFYLNA EEFIDAVAHT IERKLREPAV V

Best Arabidopsis Sequence Match ( AT1G54340.1 )
(BLAST)

001: MEFEKIKVIN PVVEMDGDEM TRVIWKFIKD KLIFPFLELD IKYFDLGLPN RDFTDDKVTI ETAEATLKYN VAIKCATITP DEARVREFGL KKMWRSPNGT
101: IRNILNGTVF REPIICRNIP RLVPGWTKPI CIGRHAFGDQ YRATDLIVNE PGKLKLVFEP SGSSQKTEFE VFNFTGGGVA LAMYNTDESI RAFAESSMYT
201: AYQKKWPLYL STKNTILKIY DGRFKDIFQE VYEANWRSKY EAAGIWYEHR LIDDMVAYAM KSEGGYVWAC KNYDGDVQSD FLAQGYGSLG MMTSVLVCPD
301: GKTIEAEAAH GTVTRHYRVH QKGGETSTNS IASIFAWSRG LAHRAKLDSN AALLSYTEKL EAACMGTVES GKMTKDLALL IHGAKVRRDQ YVNTEEFIDA
401: VAWELKRRLL GNNSRL

Arabidopsis Description

ICDHPeroxisomal isocitrate dehydrogenase [NADP] [Source:UniProtKB/Swiss-Prot;Acc:Q9SLK0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.