Factsheet for AT5G14590.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70573	Canola	mitochondrion, plastid	89.07	89.44
Bra006262.1-P	Field mustard	mitochondrion, plastid	88.45	88.82
CDX78585	Canola	mitochondrion, plastid	88.04	88.04
GSMUA_Achr6P36990_001	Banana	mitochondrion	38.76	84.68
PGSC0003DMT400001262	Potato	cytosol	69.48	84.04
AT1G65930.1	Thale cress	cytosol	65.57	77.56
KRH56574	Soybean	nucleus	74.02	76.38
HORVU2Hr1G087970.8	Barley	cytosol	62.47	76.32
Solyc02g086610.2.1	Tomato	plastid	73.4	75.58
AT1G54340.1	Thale cress	peroxisome	64.12	74.76
Os04t0508200-01	Rice	plasma membrane, plastid	73.61	74.69
TraesCS2A01G363500.1	Wheat	mitochondrion	73.2	74.58
TraesCS2B01G381500.1	Wheat	mitochondrion	72.99	74.37
TraesCS2D01G361100.1	Wheat	mitochondrion	72.58	73.95
VIT_14s0066g00950.t01	Wine grape	mitochondrion	72.99	72.84
EES11093	Sorghum	mitochondrion	72.99	72.69
GSMUA_Achr2P23210_001	Banana	mitochondrion, plastid	71.96	70.94
Zm00001d003083_P002	Maize	mitochondrion	70.72	68.19
KRG93238	Soybean	cytosol	31.34	65.8
GSMUA_Achr5P00030_001	Banana	cytosol	9.07	58.67

Protein Annotations

KEGG:00020+1.1.1.42	KEGG:00480+1.1.1.42	KEGG:00720+1.1.1.42	Gene3D:3.40.718.10	MapMan:50.1.1	EntrezGene:831311
ProteinID:AED92051.1	ArrayExpress:AT5G14590	EnsemblPlantsGene:AT5G14590	RefSeq:AT5G14590	TAIR:AT5G14590	RefSeq:AT5G14590-TAIR-G
EnsemblPlants:AT5G14590.1	TAIR:AT5G14590.1	EMBL:AY099683	Unigene:At.46811	EMBL:BT000276	ProteinID:CAB87626.1
GO:GO:0000166	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004450	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006091
GO:GO:0006099	GO:GO:0006102	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009534
GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009987	GO:GO:0016491	GO:GO:0016616
GO:GO:0046872	GO:GO:0051287	GO:GO:0055114	InterPro:IsoCit/isopropylmalate_DH_CS	InterPro:IsoPropMal-DH-like_dom	InterPro:Isocitrate_DH_NADP
RefSeq:NP_196963.2	PFAM:PF00180	PIRSF:PIRSF000108	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007131	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	ScanProsite:PS00470	PANTHER:PTHR11822
PANTHER:PTHR11822:SF5	UniProt:Q8LPJ5	SMART:SM01329	SUPFAM:SSF53659	TIGRFAMs:TIGR00127	UniParc:UPI00000AC58E
SEG:seg	:	:	:	:	:

Description

Isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LPJ5]

Coordinates

chr5:-:4703298..4706826

Molecular Weight (calculated)

54199.1 Da

IEP (calculated)

8.120

GRAVY (calculated)

-0.215

Length

485 amino acids

Sequence
(BLAST)

001: MLNKLTHGVF TYRASLTAML SSSTSAGLSS SFVSSRFLSS GIFSSGASRN RVTFPVQFHR ASAVRCFASS GGSDRIQVQN PIVEMDGDEM TRVIWSMIKE
101: KLILPYLDLD IKYFDLGILN RDATDDKVTV ESAEAALKYN VAIKCATITP DEGRVKEFGL KSMWRSPNGT IRNILDGTVF REPIMCSNIP RLVPGWEKPI
201: CIGRHAFGDQ YRATDTVIKG PGKLKMVFVP EDGNAPVELD VYDFKGPGVA LAMYNVDESI RAFAESSMAM ALTKKWPLYL STKNTILKKY DGRFKDIFQE
301: VYEANWKQKF EEHSIWYEHR LIDDMVAYAV KSEGGYVWAC KNYDGDVQSD LLAQGFGSLG LMTSVLLSAD GKTLESEAAH GTVTRHFRLH QKGQETSTNS
401: IASIFAWTRG LEHRAKLDKN EKLMDFVKKL ESSCVNTVET GKMTKDLALL IHGPKVSRDL FLNTEEFIDA VASKLKTQFK ELPLV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.