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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • vacuole 1
  • mitochondrion 2
  • plastid 1
  • cytoskeleton 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr6P36990_001 Banana mitochondrion 48.63 87.84
Solyc02g086610.2.1 Tomato plastid 99.0 84.29
HORVU2Hr1G087970.8 Barley cytosol 74.06 74.81
PGSC0003DMT400081790 Potato cytosol, mitochondrion 77.31 74.7
KRH56574 Soybean nucleus 86.78 74.04
Os04t0508200-01 Rice plasma membrane, plastid 85.79 71.97
TraesCS2A01G363500.1 Wheat mitochondrion 84.79 71.43
TraesCS2B01G381500.1 Wheat mitochondrion 84.54 71.22
TraesCS2D01G361100.1 Wheat mitochondrion 84.04 70.8
CDX70573 Canola mitochondrion, plastid 85.04 70.6
EES11093 Sorghum mitochondrion 85.54 70.43
CDX78585 Canola mitochondrion, plastid 85.04 70.31
VIT_14s0066g00950.t01 Wine grape mitochondrion 84.79 69.96
Bra006262.1-P Field mustard mitochondrion, plastid 84.04 69.77
AT5G14590.1 Thale cress mitochondrion, plastid 84.04 69.48
GSMUA_Achr2P23210_001 Banana mitochondrion, plastid 84.54 68.9
Zm00001d003083_P002 Maize mitochondrion 83.04 66.2
KRG93238 Soybean cytosol 36.66 63.64
PGSC0003DMT400034694 Potato peroxisome 67.58 60.9
GSMUA_Achr5P00030_001 Banana cytosol 10.72 57.33
Protein Annotations
KEGG:00020+1.1.1.42KEGG:00480+1.1.1.42KEGG:00720+1.1.1.42Gene3D:3.40.718.10MapMan:50.1.1ProteinID:CAA63220
ProteinID:CAA63220.1GO:GO:0000166GO:GO:0000287GO:GO:0003674GO:GO:0003824GO:GO:0004450
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739
GO:GO:0006091GO:GO:0006099GO:GO:0006102GO:GO:0008150GO:GO:0008152GO:GO:0009507
GO:GO:0009534GO:GO:0009536GO:GO:0009570GO:GO:0009579GO:GO:0009987GO:GO:0016491
GO:GO:0016616GO:GO:0046872GO:GO:0051287GO:GO:0055114InterPro:IsoCit/isopropylmalate_DH_CSInterPro:IsoPropMal-DH-like_dom
InterPro:Isocitrate_DH_NADPUniProt:M0ZI69PFAM:PF00180EnsemblPlantsGene:PGSC0003DMG400000481PGSC:PGSC0003DMG400000481EnsemblPlants:PGSC0003DMT400001262
PIRSF:PIRSF000108ScanProsite:PS00470PANTHER:PTHR11822PANTHER:PTHR11822:SF5SMART:SM01329SUPFAM:SSF53659
TIGRFAMs:TIGR00127UniParc:UPI00029635A1EMBL:X92486SEG:seg::
Description
Isocitrate dehydrogenase [NADP] [Source:PGSC_GENE;Acc:PGSC0003DMG400000481]
Coordinates
chr2:-:47215193..47220983
Molecular Weight (calculated)
45313.2 Da
IEP (calculated)
6.518
GRAVY (calculated)
-0.336
Length
401 amino acids
Sequence
(BLAST)
001: MDGDEMTRVI WKMIKDKLIY PYLELDTKYY DLGILNRDAT DDQVTVESAE ATLKYNVAVK CATITPDETR VKEFGLKSMW KSPNGTIRNI LNGTVFREPI
101: LCTNIPRIVP GWKKPICIGR HAFGDQYRAT DSIINGPGKL KMVFVPENGE SPMELDVYDF KGPGIALAMY NVDQSIRAFA ESSMSMAFSK KWPLYLSTKN
201: TILKKYDGRF KDIFQEVYEE KWKQQFEEHS IWYEHRLIDD MVAYALKSEG GYVWACKNYD GDVQSDLLAQ GFGSLGLMTS VLLSSDGKTL EAEAAHGTVT
301: RHFRLHQKGQ ETSTNSVASI FAWTRGLGHR AQLDGNQKLL EFVHTLEASC IGTIESGKMT KDLAILAHGP KVSREFYLNT EEFIDAVAQK LQEKLHASVP
401: I
Best Arabidopsis Sequence Match ( AT5G14590.1 )
(BLAST)
001: MLNKLTHGVF TYRASLTAML SSSTSAGLSS SFVSSRFLSS GIFSSGASRN RVTFPVQFHR ASAVRCFASS GGSDRIQVQN PIVEMDGDEM TRVIWSMIKE
101: KLILPYLDLD IKYFDLGILN RDATDDKVTV ESAEAALKYN VAIKCATITP DEGRVKEFGL KSMWRSPNGT IRNILDGTVF REPIMCSNIP RLVPGWEKPI
201: CIGRHAFGDQ YRATDTVIKG PGKLKMVFVP EDGNAPVELD VYDFKGPGVA LAMYNVDESI RAFAESSMAM ALTKKWPLYL STKNTILKKY DGRFKDIFQE
301: VYEANWKQKF EEHSIWYEHR LIDDMVAYAV KSEGGYVWAC KNYDGDVQSD LLAQGFGSLG LMTSVLLSAD GKTLESEAAH GTVTRHFRLH QKGQETSTNS
401: IASIFAWTRG LEHRAKLDKN EKLMDFVKKL ESSCVNTVET GKMTKDLALL IHGPKVSRDL FLNTEEFIDA VASKLKTQFK ELPLV
Arabidopsis Description
Isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LPJ5]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.