Factsheet for HORVU2Hr1G087970.8

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P36990_001	Banana	mitochondrion	48.61	86.94
PGSC0003DMT400001262	Potato	cytosol	74.81	74.06
TraesCS2B01G381500.1	Wheat	mitochondrion	84.89	70.8
TraesCS2D01G361100.1	Wheat	mitochondrion	84.63	70.59
TraesCS2A01G363500.1	Wheat	mitochondrion	84.13	70.17
Os04t0508200-01	Rice	plasma membrane, plastid	82.62	68.62
EES11093	Sorghum	mitochondrion	80.1	65.3
KRH56574	Soybean	nucleus	76.57	64.68
HORVU3Hr1G033920.10	Barley	peroxisome	67.51	64.58
Solyc02g086610.2.1	Tomato	plastid	75.06	63.27
CDX70573	Canola	mitochondrion, plastid	76.07	62.53
AT5G14590.1	Thale cress	mitochondrion, plastid	76.32	62.47
CDX78585	Canola	mitochondrion, plastid	75.82	62.06
VIT_14s0066g00950.t01	Wine grape	mitochondrion	75.82	61.93
Bra006262.1-P	Field mustard	mitochondrion, plastid	75.06	61.7
Zm00001d003083_P002	Maize	mitochondrion	77.83	61.43
GSMUA_Achr5P00030_001	Banana	cytosol	11.59	61.33
GSMUA_Achr2P23210_001	Banana	mitochondrion, plastid	75.82	61.18
HORVU3Hr1G059060.2	Barley	mitochondrion	69.27	58.14
KRG93238	Soybean	cytosol	29.72	51.08

Protein Annotations

KEGG:00020+1.1.1.42	KEGG:00480+1.1.1.42	KEGG:00720+1.1.1.42	Gene3D:3.40.718.10	MapMan:50.1.1	UniProt:A0A287IU11
ncoils:Coil	GO:GO:0000166	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004450
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006091	GO:GO:0006099	GO:GO:0006102	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009534	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009987	GO:GO:0016491
GO:GO:0016616	GO:GO:0046872	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:HORVU2Hr1G087970	EnsemblPlants:HORVU2Hr1G087970.8
InterPro:IsoCit/isopropylmalate_DH_CS	InterPro:IsoPropMal-DH-like_dom	InterPro:Isocitrate_DH_NADP	PFAM:PF00180	PIRSF:PIRSF000108	ScanProsite:PS00470
PANTHER:PTHR11822	PANTHER:PTHR11822:SF5	SMART:SM01329	SUPFAM:SSF53659	TIGRFAMs:TIGR00127	UniParc:UPI000B463A14
SEG:seg	:	:	:	:	:

Description

Isocitrate dehydrogenase [NADP] [Source:UniProtKB/TrEMBL;Acc:A0A287IU11]

Coordinates

chrchr2H:-:631190335..631195313

Molecular Weight (calculated)

40837.0 Da

IEP (calculated)

8.056

GRAVY (calculated)

-0.324

Length

397 amino acids

Sequence
(BLAST)

001: MMGTPISRHH LVCLXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXYF DLGVLNRDAT DDKVTVESAE ATLKYNVAVK CATITPDETR VKEFKLKSMW
101: RSPNGTIRNI LNGTVFREPI LCKNIPRILT GWKKPICIGR HAFGDQYRAT DMIINGPGKL KMVYVPDGAE PVELNVYDFK GPGVALAMYN VDESIRAFAE
201: SSMAMALSKK WPLYLSTKNT ILKKYDGRFK DIFQEVYEEN WKEKFEENSI WYEHRLIDDM VAYAVKSEGG YVWACKNYDG DVQSDFLAQG FGSLGLMSSV
301: LLSSDGKTLE AEAAHGTVTR HFRLHEKGQE TSTNSIASIF AWTRGLEHRA KLDKNDRLLD FTQKLETACV ETVESGKMTK DLALLSHGAK PKSSACK

Best Arabidopsis Sequence Match ( AT1G54340.1 )
(BLAST)

001: MEFEKIKVIN PVVEMDGDEM TRVIWKFIKD KLIFPFLELD IKYFDLGLPN RDFTDDKVTI ETAEATLKYN VAIKCATITP DEARVREFGL KKMWRSPNGT
101: IRNILNGTVF REPIICRNIP RLVPGWTKPI CIGRHAFGDQ YRATDLIVNE PGKLKLVFEP SGSSQKTEFE VFNFTGGGVA LAMYNTDESI RAFAESSMYT
201: AYQKKWPLYL STKNTILKIY DGRFKDIFQE VYEANWRSKY EAAGIWYEHR LIDDMVAYAM KSEGGYVWAC KNYDGDVQSD FLAQGYGSLG MMTSVLVCPD
301: GKTIEAEAAH GTVTRHYRVH QKGGETSTNS IASIFAWSRG LAHRAKLDSN AALLSYTEKL EAACMGTVES GKMTKDLALL IHGAKVRRDQ YVNTEEFIDA
401: VAWELKRRLL GNNSRL

Arabidopsis Description

ICDHPeroxisomal isocitrate dehydrogenase [NADP] [Source:UniProtKB/Swiss-Prot;Acc:Q9SLK0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.