CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06774	Soybean	nucleus	81.61	52.85
KRG94751	Soybean	extracellular, nucleus	81.23	52.61
PGSC0003DMT400087142	Potato	plastid	43.3	50.67
KRH74912	Soybean	cytosol	23.37	43.57
KRH70104	Soybean	plastid	44.83	42.39
KRH60895	Soybean	nucleus, plastid	67.43	39.02
KRH51576	Soybean	nucleus, plastid	67.43	38.85
KRH63725	Soybean	endoplasmic reticulum, nucleus	42.15	32.54
KRH54234	Soybean	endoplasmic reticulum, nucleus	41.76	32.25
KRH63724	Soybean	nucleus	41.76	32.25
KRH54227	Soybean	endoplasmic reticulum, nucleus	41.38	31.95
KRG97466	Soybean	endoplasmic reticulum, nucleus	40.23	30.88
KRH31426	Soybean	endoplasmic reticulum	40.23	30.88
KRH57621	Soybean	endoplasmic reticulum	39.46	30.56
KRG94350	Soybean	cytosol, mitochondrion	39.08	30.27
KRH66238	Soybean	plastid	45.59	28.47
KRH07324	Soybean	extracellular, nucleus	45.21	28.23
KRH26225	Soybean	mitochondrion	30.27	24.92
KRH37937	Soybean	plastid	6.13	18.18

Protein Annotations

Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:35.1	UniProt:A0A0R0FQX0	EMBL:ACUP02010176	EnsemblPlantsGene:GLYMA_16G150200
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016620	GO:GO:0055114
InterPro:GlycerAld_3-P_DH_NAD(P)-bd	InterPro:GlycerAld_3-P_DH_cat	EnsemblPlants:KRH08444	ProteinID:KRH08444	ProteinID:KRH08444.1	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00044	PFAM:PF02800	PANTHER:PTHR43148	PANTHER:PTHR43148:SF5	SMART:SM00846	SUPFAM:SSF51735
SUPFAM:SSF55347	UniParc:UPI0006EDFD38	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr16:+:31061228..31064304

Molecular Weight (calculated)

28220.1 Da

IEP (calculated)

8.212

GRAVY (calculated)

0.036

Length

261 amino acids

Sequence
(BLAST)

001: MVDALPDSVF QKAKDNFFIP ANNKWLLQVG GREGYRKGVV EAKLKVAING FGRIGRNFLR CWHGRKDSPL DVIAINDTGG VKQASHLLKY DSTLGIFDAD
101: VKPVGDIISI DGKVIKVVSD HNPVNLPWKD LEIDLVIEGT GVFVDRDEVL ITAPGKGDIP TYVVGVNADI YNPDEPIISN ASCTLRQGII KGTMTTTHSY
201: TVPTSTGAAK AVVLVLPTLK GKLNGIALRV PTPNVSVVDL VVQGYSQRVV DLADIVAHNW K

Best Arabidopsis Sequence Match ( AT1G12900.1 )
(BLAST)

001: MASATFSVAK PSLQGFSEFS GLRNSSALPF AKRSSSDEFV SFVSFQTSAM RSNGGYRKGV TEAKIKVAIN GFGRIGRNFL RCWHGRKDSP LDVVVINDTG
101: GVKQASHLLK YDSTLGIFDA DVKPSGDSAL SVDGKIIKIV SDRNPSNLPW GELGIDLVIE GTGVFVDRDG AGKHLQAGAK KVLITAPGKG DIPTYVVGVN
201: AELYSHEDTI ISNASCTTNC LAPFVKVLDQ KFGIIKGTMT TTHSYTGDQR LLDASHRDLR RARAAALNIV PTSTGAAKAV ALVLPNLKGK LNGIALRVPT
301: PNVSVVDLVV QVSKKTFAEE VNAAFRDAAE KELKGILDVC DEPLVSVDFR CSDVSSTIDS SLTMVMGDDM VKVIAWYDNE WGYSQRVVDL ADIVANNWK

Arabidopsis Description

GAPA-2glyceraldehyde 3-phosphate dehydrogenase A subunit 2 [Source:TAIR;Acc:AT1G12900]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.