CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60895	Soybean	nucleus, plastid	54.57	38.36
KRH51576	Soybean	nucleus, plastid	54.57	38.19
KRG94751	Soybean	extracellular, nucleus	47.63	37.47
KRH06774	Soybean	nucleus	47.0	36.97
KRH70104	Soybean	plastid	29.02	33.33
KRH74912	Soybean	cytosol	14.2	32.14
KRH08444	Soybean	cytosol	24.92	30.27
KRH54227	Soybean	endoplasmic reticulum, nucleus	29.65	27.81
KRH54234	Soybean	endoplasmic reticulum, nucleus	29.65	27.81
KRH63724	Soybean	nucleus	29.65	27.81
KRH63725	Soybean	endoplasmic reticulum, nucleus	29.65	27.81
KRH31426	Soybean	endoplasmic reticulum	29.34	27.35
KRG97466	Soybean	endoplasmic reticulum, nucleus	29.02	27.06
KRH57621	Soybean	endoplasmic reticulum	28.39	26.71
KRG94350	Soybean	cytosol, mitochondrion	28.08	26.41
KRH07324	Soybean	extracellular, nucleus	31.55	23.92
KRH66238	Soybean	plastid	31.55	23.92
KRH37937	Soybean	plastid	6.31	22.73

Protein Annotations

Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:35.1	UniProt:A0A0R0H5R3	EMBL:ACUP02007674	InterPro:Autophagy-rel_prot_3_N
EnsemblPlantsGene:GLYMA_12G161000	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016620
GO:GO:0055114	InterPro:GlycerAld/Erythrose_P_DH	InterPro:GlycerAld_3-P_DH_cat	EnsemblPlants:KRH26225	ProteinID:KRH26225	ProteinID:KRH26225.1
InterPro:NAD(P)-bd_dom_sf	PFAM:PF02800	PFAM:PF03986	PRINTS:PR00078	PANTHER:PTHR43148	PANTHER:PTHR43148:SF1
SUPFAM:SSF51735	SUPFAM:SSF55347	UniParc:UPI0006EE0AEC	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr12:-:29328629..29333471

Molecular Weight (calculated)

35477.9 Da

IEP (calculated)

8.730

GRAVY (calculated)

0.026

Length

317 amino acids

Sequence
(BLAST)

001: MAFYRQKSNQ LRQINIIEPL ASNWTRRLLG GRDDSDSEAS QRFQRHCRED HWPRTIFGVK EKGVLNVSKL VTIGDNLVAK CPTWSWASKH IQASSKKVII
101: TAPAKGADIL MYVVEVNEGD YTHEISSIIK SVTNSRVYTD SGYIFFFLYN VSSTCNSASC TTSCLAPFVK ILDEEFASHC DLRRSRAVAL NIVLTNTGAA
201: KAMSLVLPQL KFKLNGIALR VPTPNVSVVD LVVNVEKKGL TVEEVNATFK KVAEGRLKGV LDACDVPLVS IDFRCSDVSS TIDSSLTIWS WEMIWLKWLL
301: GMTMNGVIAK EWLIWHI

Best Arabidopsis Sequence Match ( AT1G12900.1 )
(BLAST)

001: MASATFSVAK PSLQGFSEFS GLRNSSALPF AKRSSSDEFV SFVSFQTSAM RSNGGYRKGV TEAKIKVAIN GFGRIGRNFL RCWHGRKDSP LDVVVINDTG
101: GVKQASHLLK YDSTLGIFDA DVKPSGDSAL SVDGKIIKIV SDRNPSNLPW GELGIDLVIE GTGVFVDRDG AGKHLQAGAK KVLITAPGKG DIPTYVVGVN
201: AELYSHEDTI ISNASCTTNC LAPFVKVLDQ KFGIIKGTMT TTHSYTGDQR LLDASHRDLR RARAAALNIV PTSTGAAKAV ALVLPNLKGK LNGIALRVPT
301: PNVSVVDLVV QVSKKTFAEE VNAAFRDAAE KELKGILDVC DEPLVSVDFR CSDVSSTIDS SLTMVMGDDM VKVIAWYDNE WGYSQRVVDL ADIVANNWK

Arabidopsis Description

GAPA-2glyceraldehyde 3-phosphate dehydrogenase A subunit 2 [Source:TAIR;Acc:AT1G12900]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.