CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60734	Soybean	plasma membrane	93.93	93.51
VIT_03s0038g01430.t01	Wine grape	mitochondrion	24.49	66.06
VIT_03s0038g01420.t01	Wine grape	extracellular, plasma membrane	32.36	57.6
PGSC0003DMT400004139	Potato	extracellular	25.84	55.83
Solyc01g111050.2.1	Tomato	cytosol	57.08	54.16
KRH72178	Soybean	mitochondrion	35.28	42.55
KRG93686	Soybean	extracellular, plasma membrane, vacuole	41.12	42.46
KRH45084	Soybean	extracellular, golgi, plasma membrane	42.7	42.41
KRH01360	Soybean	extracellular, golgi, plasma membrane	42.47	42.19
KRH03165	Soybean	extracellular	42.92	42.07
KRH63181	Soybean	endoplasmic reticulum	42.92	41.89
KRH54735	Soybean	endoplasmic reticulum	42.7	41.67
KRH45086	Soybean	plasma membrane	40.22	41.53
KRH01361	Soybean	extracellular, plasma membrane, vacuole	40.0	41.3
KRH01357	Soybean	nucleus	38.43	40.71
KRG93684	Soybean	extracellular, vacuole	41.35	40.53
KRH18350	Soybean	cytosol	15.96	39.89
KRH18352	Soybean	plasma membrane	40.45	39.3
KRH54737	Soybean	plasma membrane	38.43	37.34
KRH63180	Soybean	plasma membrane	38.2	37.12
KRH56778	Soybean	extracellular	17.08	36.36
KRH22248	Soybean	golgi, vacuole	27.19	18.17
KRH50776	Soybean	endoplasmic reticulum, vacuole	26.07	18.04
KRH02312	Soybean	endoplasmic reticulum, extracellular	26.07	18.01
KRH77883	Soybean	extracellular, plasma membrane, vacuole	24.04	17.86
KRH27599	Soybean	extracellular	25.39	17.36
KRH27088	Soybean	mitochondrion	26.07	17.29
KRH37033	Soybean	extracellular	24.94	17.08

Protein Annotations

EntrezGene:100809729	MapMan:21.1.2.2	UniProt:A0A0R0JA31	EMBL:ACUP02003373	InterPro:COBRA_pln	EnsemblPlantsGene:GLYMA_06G005800
GO:GO:0005575	GO:GO:0008150	GO:GO:0009987	GO:GO:0010215	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007	EnsemblPlants:KRH51434	ProteinID:KRH51434
ProteinID:KRH51434.1	PFAM:PD140986	PFAM:PF04833	PIRSF:PIRSF038122	PANTHER:PTHR31673	PANTHER:PTHR31673:SF9
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0006ED7C70	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:-:467625..469796

Molecular Weight (calculated)

49806.9 Da

IEP (calculated)

6.400

GRAVY (calculated)

-0.176

Length

445 amino acids

Sequence
(BLAST)

001: MVLNVHRVYS PTLNSIILLL ALCTLSDCYD PLDPNGNISV TFDILERTTD NGYLARVTLE NYYQYRHVEK PGWKLGWTWA NNEVIWSMSG AIATDRGNCS
101: SYSGSQMPHS CKKDPTIVDL SLDVSQNRSE HCCRGGLLSA WSIDPFNAFS SFELEVRNVG DNNPLGQAPN NLTLMAPGPG YTCSPLLDTD LSVSSDFGGL
201: RQVPVLRTWK STCAYSSFIA NTIPVCCVSL SSFYNPAITS CRNCSCGCRE ADKSTASCIR PSSLPRSNGD NTIDEIIECT DHMCPVRVHW HFKNNYMNQW
301: RVKLTVSNYN YNRNYSNWNV LVQHPGFTQK ARTYSFNSTR LPTLGLQDGV SLFWGIDYYN NELVHSDKGV VGLVTTEILL DKDPNSFTVS NGWAFPRRIY
401: FNGENCEMPL PDTFPMLPNG SSSLRATYCG FSLLFILLFL ALLLL

Best Arabidopsis Sequence Match ( AT3G02210.1 )
(BLAST)

001: MGFFLCSSSS IFFKFGISII FLVSFSGLTP SEAYDPLDPS GNITVKWDII TWTGDGYVAT VTVYNFQQYR HIQAPGWTLG WSWAKREVIW GMNGGQTTEQ
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL

Arabidopsis Description

COBL1COBL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VHK7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.