Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 8
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH18350 | Soybean | cytosol | 39.91 | 96.63 |
| KRH45086 | Soybean | plasma membrane | 87.7 | 87.7 |
| KRH01361 | Soybean | extracellular, plasma membrane, vacuole | 86.54 | 86.54 |
| VIT_14s0083g01150.t01 | Wine grape | plasma membrane | 81.21 | 81.21 |
| PGSC0003DMT400082702 | Potato | extracellular | 46.4 | 80.65 |
| AT5G15630.1 | Thale cress | extracellular, plasma membrane, vacuole | 80.51 | 80.51 |
| CDX90983 | Canola | extracellular | 79.81 | 79.08 |
| Bra023528.1-P | Field mustard | extracellular, plasma membrane, vacuole | 79.58 | 79.03 |
| PGSC0003DMT400002674 | Potato | plasma membrane | 77.96 | 77.42 |
| PGSC0003DMT400003723 | Potato | extracellular | 77.96 | 77.42 |
| Bra008684.1-P | Field mustard | extracellular | 69.14 | 77.0 |
| CDX69511 | Canola | plasma membrane | 79.35 | 75.16 |
| CDX85543 | Canola | extracellular, plasma membrane, vacuole | 79.12 | 74.78 |
| GSMUA_Achr4P03210_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 77.49 | 74.72 |
| CDY26444 | Canola | plastid | 62.18 | 73.22 |
| GSMUA_Achr4P14440_001 | Banana | plasma membrane | 75.17 | 70.74 |
| KRH72178 | Soybean | mitochondrion | 59.86 | 69.92 |
| EER99679 | Sorghum | plasma membrane | 71.46 | 69.06 |
| Zm00001d022082_P001 | Maize | extracellular, plasma membrane, vacuole | 70.77 | 68.23 |
| EER94687 | Sorghum | extracellular | 70.53 | 68.16 |
| TraesCS5D01G107900.1 | Wheat | extracellular | 70.77 | 67.93 |
| TraesCS5A01G095200.1 | Wheat | extracellular | 70.53 | 67.71 |
| TraesCS5B01G101400.1 | Wheat | extracellular | 70.53 | 67.56 |
| Zm00001d047276_P001 | Maize | plasma membrane | 70.53 | 67.56 |
| KRH01360 | Soybean | extracellular, golgi, plasma membrane | 69.14 | 66.52 |
| TraesCS2A01G175000.1 | Wheat | plasma membrane | 69.14 | 66.37 |
| TraesCS2D01G182400.1 | Wheat | plasma membrane | 68.68 | 66.22 |
| HORVU3Hr1G007580.2 | Barley | extracellular | 57.54 | 66.13 |
| KRH45084 | Soybean | extracellular, golgi, plasma membrane | 68.45 | 65.85 |
| TraesCS2B01G201400.1 | Wheat | plasma membrane | 68.45 | 65.85 |
| KRG93684 | Soybean | extracellular, vacuole | 68.91 | 65.42 |
| KRH54735 | Soybean | endoplasmic reticulum | 69.14 | 65.35 |
| KRH63180 | Soybean | plasma membrane | 69.37 | 65.28 |
| Os03t0416200-01 | Rice | extracellular, golgi, plasma membrane | 70.77 | 65.17 |
| KRH63181 | Soybean | endoplasmic reticulum | 68.91 | 65.13 |
| KRH03165 | Soybean | extracellular | 68.45 | 64.98 |
| KRH54737 | Soybean | plasma membrane | 68.68 | 64.63 |
| Os07t0604400-00 | Rice | extracellular | 67.29 | 64.3 |
| KRH01357 | Soybean | nucleus | 62.41 | 64.05 |
| KRH18352 | Soybean | plasma membrane | 67.98 | 63.97 |
| HORVU3Hr1G009960.1 | Barley | plastid | 31.79 | 62.84 |
| HORVU2Hr1G033060.13 | Barley | mitochondrion | 63.34 | 61.07 |
| TraesCS3D01G047900.1 | Wheat | plastid | 34.57 | 59.84 |
| TraesCSU01G047200.1 | Wheat | plastid | 32.02 | 59.48 |
| HORVU0Hr1G004650.3 | Barley | mitochondrion | 54.76 | 56.87 |
| HORVU2Hr1G033080.1 | Barley | extracellular | 23.67 | 55.43 |
| KRH56778 | Soybean | extracellular | 26.68 | 55.02 |
| KRH51434 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 42.46 | 41.12 |
| KRH60734 | Soybean | plasma membrane | 41.76 | 40.27 |
| CDX70627 | Canola | cytosol, nucleus, plasma membrane | 80.05 | 40.21 |
| KRH02312 | Soybean | endoplasmic reticulum, extracellular | 30.39 | 20.34 |
| KRH50776 | Soybean | endoplasmic reticulum, vacuole | 29.93 | 20.06 |
| KRH77883 | Soybean | extracellular, plasma membrane, vacuole | 27.15 | 19.53 |
| KRH22248 | Soybean | golgi, vacuole | 29.47 | 19.07 |
| KRH27599 | Soybean | extracellular | 28.77 | 19.05 |
| KRH27088 | Soybean | mitochondrion | 29.47 | 18.93 |
| KRH37033 | Soybean | extracellular | 28.54 | 18.92 |
Protein Annotations
| EntrezGene:100798678 | MapMan:21.1.2.2 | EMBL:ACUP02011612 | InterPro:COBRA_pln | EnsemblPlantsGene:GLYMA_19G033600 | GO:GO:0005575 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010215 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 | UniProt:I1N6E3 | EnsemblPlants:KRG93686 | ProteinID:KRG93686 |
| ProteinID:KRG93686.1 | PFAM:PD140986 | PFAM:PF04833 | PIRSF:PIRSF038122 | PFscan:PS51257 | PANTHER:PTHR31673 |
| PANTHER:PTHR31673:SF19 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000233E339 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr19:-:4323838..4326967
Molecular Weight (calculated)
48449.8 Da
IEP (calculated)
8.943
GRAVY (calculated)
-0.109
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLVVSALCV LVLFSCAVAY DPLDPNGNVT IKWDLMSWTP DGYVAVVTMH NFQMFRHIMN PGWTLGWTWA KKEVIWSMIG AQTTEQGDCS KFKGNIPHCC
101: KKIPTVVDLL PGVPYNQQFS NCCKGGVVAA WGQDPSQAIS SFQVSVGQAG TSNKTVKLPK NFTLFAPGPG YTCGPAKIVP STNFLTPDKR RKTQALMTWN
201: VTCTYSQFLA RKNPSCCVSL SSFYNETITP CPSCACGCQN KKHCVKGNSK ILSMVGVHTP KKDNEPLLQC THHMCPIRVH WHVKTNYKDY WRVKVAITNF
301: NYRMNHSLWS LAVQHPNLNN LTQVFSFNYK PLLPYGSIND TGMFYGMKYF NDLLMEAGPT GNVQSELLLQ KDKDAFTFKQ GWAFPRKVYF NGDECMLPPP
401: DTYPFLPNSA PASLLNFPAF MLLLFFLLAV W
101: KKIPTVVDLL PGVPYNQQFS NCCKGGVVAA WGQDPSQAIS SFQVSVGQAG TSNKTVKLPK NFTLFAPGPG YTCGPAKIVP STNFLTPDKR RKTQALMTWN
201: VTCTYSQFLA RKNPSCCVSL SSFYNETITP CPSCACGCQN KKHCVKGNSK ILSMVGVHTP KKDNEPLLQC THHMCPIRVH WHVKTNYKDY WRVKVAITNF
301: NYRMNHSLWS LAVQHPNLNN LTQVFSFNYK PLLPYGSIND TGMFYGMKYF NDLLMEAGPT GNVQSELLLQ KDKDAFTFKQ GWAFPRKVYF NGDECMLPPP
401: DTYPFLPNSA PASLLNFPAF MLLLFFLLAV W
001: MRLLFSFCFF FFMIIFTATA YDPLDPSGNI TIKWDIMSWT ADGYVATVTM NNFQIYRHIQ NPGWTLGWTW AKKEVIWSMV GAQTTEQGDC SKFKGNVPHC
101: CKKTPTVVDL LPGVPYNQQF SNCCKGGVIG AWGQDPSAAV SQFQVSAGLA GTTNKTVKLP KNFTLLGPGP GYTCGPAKIV PSTVFLTTDK RRKTQALMTW
201: NVTCTYSQFL ARKHPSCCVS FSSFYNDTIT PCPSCACGCE NKKSCVKADS KILTKKGLNT PKKDNTPLLQ CTHHMCPVRV HWHVKTNYKD YWRVKIAITN
301: FNYRMNHTLW TLAIQHPNLN NVTQVFSFDY KPVSPYGSIN DTGMFYGTKF YNDLLMEAGP SGNVQSEVLL QKDQKTFTFK QGWAFPRKVY FNGDECMLPP
401: PDSYPFLPNS AQGNFASFSL TILLLLFISI W
101: CKKTPTVVDL LPGVPYNQQF SNCCKGGVIG AWGQDPSAAV SQFQVSAGLA GTTNKTVKLP KNFTLLGPGP GYTCGPAKIV PSTVFLTTDK RRKTQALMTW
201: NVTCTYSQFL ARKHPSCCVS FSSFYNDTIT PCPSCACGCE NKKSCVKADS KILTKKGLNT PKKDNTPLLQ CTHHMCPVRV HWHVKTNYKD YWRVKIAITN
301: FNYRMNHTLW TLAIQHPNLN NVTQVFSFDY KPVSPYGSIN DTGMFYGTKF YNDLLMEAGP SGNVQSEVLL QKDQKTFTFK QGWAFPRKVY FNGDECMLPP
401: PDSYPFLPNS AQGNFASFSL TILLLLFISI W
Arabidopsis Description
COBL4COBRA-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFW3]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.