CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH18352	Soybean	plasma membrane	98.92	79.69
KRG93684	Soybean	extracellular, vacuole	94.31	76.65
KRH01360	Soybean	extracellular, golgi, plasma membrane	83.47	68.75
KRH45084	Soybean	extracellular, golgi, plasma membrane	82.38	67.86
Zm00001d031479_P001	Maize	cytosol, mitochondrion	30.08	67.68
CDY24004	Canola	cytosol, nucleus, plastid	14.91	64.71
KRH03165	Soybean	extracellular	79.13	64.32
KRH63181	Soybean	endoplasmic reticulum	79.13	64.04
TraesCS3A01G409900.1	Wheat	plastid	47.97	63.9
KRH54735	Soybean	endoplasmic reticulum	78.59	63.6
CDX86358	Canola	extracellular	73.71	62.39
Bra025406.1-P	Field mustard	extracellular	73.71	62.39
EER97506	Sorghum	extracellular, plasma membrane	77.24	62.23
CDX85277	Canola	extracellular	73.44	62.16
KRH01357	Soybean	nucleus	70.73	62.14
GSMUA_Achr1P24500_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	76.69	61.79
AT3G02210.1	Thale cress	extracellular	75.61	61.73
GSMUA_Achr4P01440_001	Banana	extracellular, plasma membrane	76.15	61.49
CDY70289	Canola	extracellular	66.12	61.46
Os07t0604300-01	Rice	extracellular	73.71	60.99
KRH18350	Soybean	cytosol	29.27	60.67
Bra039163.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	74.8	60.66
CDY60470	Canola	plasma membrane	75.07	60.48
CDY43250	Canola	plasma membrane	74.8	60.39
AT3G29810.1	Thale cress	extracellular	72.09	60.32
EER90860	Sorghum	extracellular, golgi, plasma membrane	72.9	59.91
KRG93686	Soybean	extracellular, plasma membrane, vacuole	69.92	59.86
Os05t0386800-01	Rice	extracellular	73.98	59.74
TraesCS6D01G364400.1	Wheat	extracellular	72.09	59.51
Zm00001d013256_P001	Maize	extracellular	72.36	59.47
TraesCS6B01G418400.1	Wheat	extracellular	71.82	59.28
Bra040587.1-P	Field mustard	extracellular	70.46	59.23
TraesCS6A01G379800.1	Wheat	extracellular	71.27	58.84
EER90859	Sorghum	extracellular	67.75	58.82
Zm00001d022081_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	73.17	58.7
Zm00001d034049_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	71.27	58.19
KRH45086	Soybean	plasma membrane	67.75	58.0
KRH01361	Soybean	extracellular, plasma membrane, vacuole	67.75	58.0
GSMUA_Achr2P06240_001	Banana	mitochondrion	74.8	57.86
OQU92393	Sorghum	extracellular	72.09	57.7
Os03t0416300-01	Rice	extracellular	71.54	57.64
HORVU5Hr1G095910.12	Barley	extracellular, vacuole	71.27	57.17
TraesCS5D01G401900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	70.46	56.89
TraesCS5B01G396900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	70.46	56.89
TraesCS5A01G392000.1	Wheat	endoplasmic reticulum, extracellular, golgi	70.46	56.89
TraesCS2A01G175100.1	Wheat	extracellular	67.75	55.19
TraesCS4B01G084800.1	Wheat	extracellular	67.75	54.95
TraesCS4A01G231200.1	Wheat	extracellular	68.29	54.78
TraesCS4D01G082700.1	Wheat	extracellular	68.29	54.66
HORVU4Hr1G014530.1	Barley	extracellular	68.29	54.43
TraesCS2D01G182500.1	Wheat	golgi	66.67	54.07
TraesCS2B01G201500.1	Wheat	plasma membrane	66.12	53.16
HORVU2Hr1G033070.14	Barley	mitochondrion	67.48	52.98
TraesCS3B01G443000.1	Wheat	cytosol, plasma membrane, vacuole	59.62	52.63
HORVU5Hr1G067940.1	Barley	plasma membrane, plastid	66.67	52.12
Os10t0497700-01	Rice	extracellular	59.62	51.76
KRH63180	Soybean	plasma membrane	62.87	50.66
TraesCS3D01G404800.2	Wheat	plasma membrane	62.6	50.55
KRH54737	Soybean	plasma membrane	62.6	50.44
Os03t0754500-00	Rice	extracellular	28.73	49.53
KRH56778	Soybean	extracellular	24.66	43.54
CDY29033	Canola	cytosol	20.6	41.76
TraesCS5D01G402000.1	Wheat	extracellular	24.39	39.47
HORVU5Hr1G096010.13	Barley	endoplasmic reticulum	29.27	38.71
TraesCS5B01G397000.2	Wheat	extracellular	23.31	37.89
KRH51434	Soybean	endoplasmic reticulum, plasma membrane, vacuole	42.55	35.28
KRH60734	Soybean	plasma membrane	42.55	35.12
CDY14723	Canola	cytosol	25.47	29.56
KRH77883	Soybean	extracellular, plasma membrane, vacuole	27.37	16.86
KRH27599	Soybean	extracellular	29.54	16.74
KRH02312	Soybean	endoplasmic reticulum, extracellular	27.1	15.53
KRH50776	Soybean	endoplasmic reticulum, vacuole	26.56	15.24
KRH27088	Soybean	mitochondrion	27.37	15.05
KRH22248	Soybean	golgi, vacuole	27.1	15.02
KRH37033	Soybean	extracellular	25.2	14.31

Protein Annotations

EMBL:ACUP02001178	EnsemblPlants:KRH72178	EnsemblPlantsGene:GLYMA_02G196100	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987
GO:GO:0010215	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007
InterPro:COBRA_pln	PANTHER:PTHR31673	PANTHER:PTHR31673:SF3	PFAM:PD140986	PFAM:PF04833	PIRSF:PIRSF038122
ProteinID:KRH72178	ProteinID:KRH72178.1	UniParc:UPI0006EDFC4E	UniProt:A0A0R0L3S6	MapMan:21.1.2.2	:

Description

hypothetical protein

Coordinates

chr2:+:37119590..37121997

Molecular Weight (calculated)

41320.2 Da

IEP (calculated)

8.723

GRAVY (calculated)

-0.319

Length

369 amino acids

Sequence
(BLAST)

001: MYNFQQYRHI SVPGWSLGWT WAKKEVIWSM IGGQTTEQGD CSKYKANIPH CCKKNPIVVD LLPGTPYNQQ ISNCCKGGVL SSWAQDQSKA VAAFQVSVGS
101: ASTTNKTVKV PKDFTLKAPG PGYTCGPATI VKPTQFLQPD KRRVTQALMT WNVTCTYSQF LAQRTPSCCV SLSSFYDNTV VPCTTCACGC QGNSSQSGEC
201: VDPDSPHLQS VVSNAGPGKS SITPLVRCTR HMCPIRVHWH VKLNYKEYWR VKVTVTNFNY GMNYSDWNLV VQHPNFDNLT QLFSFNYKAI TPYGSINDTA
301: MLWGLKFYND FLMQAGPLGN VQSELLFRKD KSTFTFDKGW AFPRRVYFNG DVCVMPPPDA YPWLPNADT

Best Arabidopsis Sequence Match ( AT3G02210.1 )
(BLAST)

001: MGFFLCSSSS IFFKFGISII FLVSFSGLTP SEAYDPLDPS GNITVKWDII TWTGDGYVAT VTVYNFQQYR HIQAPGWTLG WSWAKREVIW GMNGGQTTEQ
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL

Arabidopsis Description

COBL1COBL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VHK7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.