Factsheet for Zm00001d034049_P002

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90860	Sorghum	extracellular, golgi, plasma membrane	95.13	95.77
Zm00001d013256_P001	Maize	extracellular	95.13	95.77
Zm00001d031479_P001	Maize	cytosol, mitochondrion	31.86	87.8
TraesCS5D01G401900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	83.41	82.49
TraesCS5B01G396900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	83.19	82.28
TraesCS5A01G392000.1	Wheat	endoplasmic reticulum, extracellular, golgi	82.96	82.06
TraesCS6A01G379800.1	Wheat	extracellular	80.75	81.66
TraesCS6D01G364400.1	Wheat	extracellular	80.31	81.21
TraesCS6B01G418400.1	Wheat	extracellular	79.2	80.09
HORVU5Hr1G095910.12	Barley	extracellular, vacuole	78.32	76.96
VIT_14s0083g01160.t01	Wine grape	vacuole	72.12	74.77
VIT_17s0000g05070.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	74.34	73.68
GSMUA_Achr4P01440_001	Banana	extracellular, plasma membrane	74.34	73.52
Solyc02g065770.2.1	Tomato	extracellular	71.9	73.2
PGSC0003DMT400068328	Potato	extracellular	71.68	72.97
GSMUA_Achr1P24500_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	73.89	72.93
PGSC0003DMT400003470	Potato	extracellular	70.8	71.59
KRH72178	Soybean	mitochondrion	58.19	71.27
KRH63181	Soybean	endoplasmic reticulum	71.9	71.27
Solyc02g089120.2.1	Tomato	extracellular	70.35	71.14
KRH01360	Soybean	extracellular, golgi, plasma membrane	70.35	70.98
KRH54735	Soybean	endoplasmic reticulum	71.46	70.83
KRH45084	Soybean	extracellular, golgi, plasma membrane	69.47	70.09
CDY70289	Canola	extracellular	61.28	69.77
KRH03165	Soybean	extracellular	69.69	69.38
Bra025406.1-P	Field mustard	extracellular	66.59	69.04
CDX86358	Canola	extracellular	66.59	69.04
CDX85277	Canola	extracellular	66.15	68.58
KRG93684	Soybean	extracellular, vacuole	68.81	68.5
AT5G60920.1	Thale cress	endoplasmic reticulum, plasma membrane, plastid	69.03	68.42
GSMUA_Achr2P06240_001	Banana	mitochondrion	72.12	68.34
CDX87193	Canola	plasma membrane	68.58	67.98
CDY16831	Canola	plasma membrane	68.58	67.69
Bra040587.1-P	Field mustard	extracellular	65.49	67.43
Bra035951.1-P	Field mustard	plasma membrane	67.92	67.03
AT3G29810.1	Thale cress	extracellular	65.27	66.89
CDY58691	Canola	plasma membrane	67.7	66.81
CDY02184	Canola	plasma membrane	67.48	66.74
Bra012996.1-P	Field mustard	plasma membrane	67.26	66.52
KRH18352	Soybean	plasma membrane	67.26	66.38
Zm00001d022081_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	67.48	66.3
TraesCS5D01G402000.1	Wheat	extracellular	33.41	66.23
TraesCS5B01G397000.2	Wheat	extracellular	33.19	66.08
HORVU5Hr1G096010.13	Barley	endoplasmic reticulum	40.71	65.95
Os10t0497700-01	Rice	extracellular	61.95	65.88
AT3G02210.1	Thale cress	extracellular	64.82	64.82
Zm00001d047276_P001	Maize	plasma membrane	63.94	64.22
Bra039163.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	64.16	63.74
CDY60470	Canola	plasma membrane	64.38	63.54
CDY43250	Canola	plasma membrane	63.94	63.24
CDY42842	Canola	cytosol	17.04	63.11
Zm00001d022082_P001	Maize	extracellular, plasma membrane, vacuole	62.39	63.09
Bra029346.1-P	Field mustard	cytosol, plasma membrane, plastid	16.59	60.98
CDY24004	Canola	cytosol, nucleus, plastid	11.06	58.82
KRH56778	Soybean	extracellular	26.77	57.89
CDY29033	Canola	cytosol	22.12	54.95
Zm00001d002803_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	47.12	48.85
CDY14723	Canola	cytosol	26.99	38.36
Zm00001d028826_P001	Maize	plasma membrane	28.54	19.34
Zm00001d007208_P001	Maize	extracellular, plasma membrane, vacuole	27.43	18.96
Zm00001d021661_P001	Maize	mitochondrion	26.77	17.85

Protein Annotations

MapMan:21.1.2.2	EntrezGene:541793	UniProt:A0A1D6L4Z5	InterPro:COBRA_pln	GO:GO:0005575	GO:GO:0008150
GO:GO:0009987	GO:GO:0010215	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016049
GO:GO:0031225	GO:GO:0040007	ProteinID:ONM09428.1	PFAM:PD140986	PFAM:PF04833	PIRSF:PIRSF038122
PANTHER:PTHR31673	PANTHER:PTHR31673:SF3	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0008438F54	EnsemblPlantsGene:Zm00001d034049
EnsemblPlants:Zm00001d034049_P002	EnsemblPlants:Zm00001d034049_T002	SEG:seg	:	:	:

Description

Brittle stalk-2-like protein 3

Coordinates

chr1:-:282396196..282399541

Molecular Weight (calculated)

50120.0 Da

IEP (calculated)

8.622

GRAVY (calculated)

-0.138

Length

452 amino acids

Sequence
(BLAST)

001: MAASGRSVAC CAAALLAAAL LLSAPTATEA YDSLDPNGNI TIKWDIMQWT PDGYVYLLQA VVTMFNYQQF RHIGAPGWQL GWTWAKKEVI WSMVGAQTTE
101: QGDCSKFKSS PPHCCKKDPT IVDLLPGTPY NMQIANCCKA GVVNTFNQDP ANAASSFQIS VGLAGTTNKT VKVPRNFTLK TPGPGYTCGR AIVGRPTKFF
201: TADGRRATQA LMTWNVTCTY SQFLAQKTPS CCVSLSSFYN DTIVNCPTCS CGCQNPSGSN CVNEDSPNLQ AAIDGPGKWT GQPLVQCTSH MCPIRIHWHV
301: KLNYKDYWRV KITITNFNFR MNYTQWNLVA QHPNFDNITQ LFSFNYKPLT PYGGGINDTA MFWGVKFYND LLMQAGKLGN VQSELLLRKD SRTFTFEKGW
401: AFPRRVYFNG DNCVMPSPEN YPWLPNASPL TKPLALPFLV FWVALAALLA YA

Best Arabidopsis Sequence Match ( AT5G60920.1 )
(BLAST)

001: MESFFSRSTS IVSKLSFLAL WIVFLISSSS FTSTEAYDAL DPEGNITMKW DVMSWTPDGY VAVVTMFNFQ KYRHIQSPGW TLGWKWAKKE VIWSMVGAQT
101: TEQGDCSKYK GNIPHCCKKD PTVVDLLPGT PYNQQIANCC KGGVMNSWVQ DPATAASSFQ ISVGAAGTTN KTVRVPRNFT LMGPGPGYTC GPAKIVRPTK
201: FVTTDTRRTT QAMMTWNITC TYSQFLAQRT PTCCVSLSSF YNETIVGCPT CACGCQNNRT ESGACLDPDT PHLASVVSPP TKKGTVLPPL VQCTRHMCPI
301: RVHWHVKQNY KEYWRVKITI TNFNYRLNYT QWNLVAQHPN LDNITQIFSF NYKSLTPYAG LNDTAMLWGV KFYNDFLSEA GPLGNVQSEI LFRKDQSTFT
401: FEKGWAFPRR IYFNGDNCVM PPPDSYPFLP NGGSRSQFSF VAAVLLPLLV FFFFSA

Arabidopsis Description

COBProtein COBRA [Source:UniProtKB/Swiss-Prot;Acc:Q94KT8]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.