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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 4
  • golgi 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra040587.1-P Field mustard extracellular 100.0 90.43
CDX86358 Canola extracellular 85.64 77.98
CDY66895 Canola cytosol 11.08 77.19
CDX85277 Canola extracellular 84.63 77.06
AT3G29810.1 Thale cress extracellular 83.88 75.51
CDY24004 Canola cytosol, nucleus, plastid 15.11 70.59
KRH72178 Soybean mitochondrion 61.46 66.12
Os03t0754500-00 Rice extracellular 35.52 65.89
Zm00001d031479_P001 Maize cytosol, mitochondrion 27.2 65.85
KRH01360 Soybean extracellular, golgi, plasma membrane 74.31 65.85
KRH45084 Soybean extracellular, golgi, plasma membrane 74.06 65.62
CDY58691 Canola plasma membrane 73.3 63.54
CDY02184 Canola plasma membrane 73.05 63.46
CDY60470 Canola plasma membrane 73.05 63.32
CDY43250 Canola plasma membrane 72.8 63.24
CDX87193 Canola plasma membrane 72.04 62.72
GSMUA_Achr1P24500_001 Banana endoplasmic reticulum, plasma membrane, vacuole 72.29 62.66
CDY16831 Canola plasma membrane 72.29 62.66
Zm00001d013256_P001 Maize extracellular 70.28 62.14
Os07t0604300-01 Rice extracellular 69.77 62.11
EER90860 Sorghum extracellular, golgi, plasma membrane 70.03 61.92
Os05t0386800-01 Rice extracellular 71.03 61.71
GSMUA_Achr4P01440_001 Banana extracellular, plasma membrane 71.03 61.71
KRG93684 Soybean extracellular, vacuole 70.28 61.45
TraesCS6A01G379800.1 Wheat extracellular 69.02 61.3
Zm00001d034049_P002 Maize endoplasmic reticulum, plasma membrane, vacuole 69.77 61.28
TraesCS6D01G364400.1 Wheat extracellular 68.77 61.07
TraesCS6B01G418400.1 Wheat extracellular 68.77 61.07
KRH18352 Soybean plasma membrane 70.03 60.7
EER97506 Sorghum extracellular, plasma membrane 70.03 60.7
TraesCS5D01G401900.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 69.77 60.61
TraesCS5B01G396900.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 69.77 60.61
TraesCS5A01G392000.1 Wheat endoplasmic reticulum, extracellular, golgi 69.77 60.61
CDY29033 Canola cytosol 27.71 60.44
EER90859 Sorghum extracellular 63.98 59.76
HORVU5Hr1G095910.12 Barley extracellular, vacuole 69.02 59.57
GSMUA_Achr2P06240_001 Banana mitochondrion 71.54 59.54
CDX90983 Canola extracellular 64.48 58.85
Zm00001d022081_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 68.01 58.7
CDY26444 Canola plastid 53.65 58.2
OQU92393 Sorghum extracellular 67.25 57.92
Os03t0416300-01 Rice extracellular 66.5 57.64
CDY02181 Canola endoplasmic reticulum, extracellular 29.47 56.8
CDY58695 Canola extracellular 29.47 56.8
TraesCS4A01G231200.1 Wheat extracellular 64.99 56.09
TraesCS4D01G082700.1 Wheat extracellular 64.74 55.75
CDX85543 Canola extracellular, plasma membrane, vacuole 63.73 55.48
TraesCS4B01G084800.1 Wheat extracellular 63.22 55.16
HORVU4Hr1G014530.1 Barley extracellular 64.23 55.08
CDX69511 Canola plasma membrane 62.97 54.95
TraesCS3A01G409900.1 Wheat plastid 38.29 54.87
TraesCS2A01G175100.1 Wheat extracellular 62.22 54.53
TraesCS2D01G182500.1 Wheat golgi 62.22 54.29
TraesCS5B01G397000.2 Wheat extracellular 30.98 54.19
TraesCS5D01G402000.1 Wheat extracellular 30.73 53.51
Os10t0497700-01 Rice extracellular 57.18 53.41
HORVU5Hr1G067940.1 Barley plasma membrane, plastid 62.47 52.54
TraesCS3B01G443000.1 Wheat cytosol, plasma membrane, vacuole 55.16 52.39
TraesCS2B01G201500.1 Wheat plasma membrane 60.45 52.29
HORVU2Hr1G033070.14 Barley mitochondrion 61.71 52.13
HORVU5Hr1G096010.13 Barley endoplasmic reticulum 35.77 50.9
TraesCS3D01G404800.2 Wheat plasma membrane 58.44 50.77
CDY42842 Canola cytosol 15.11 49.18
CDY31063 Canola plasma membrane 50.88 46.54
CDY26445 Canola cytosol 19.14 44.97
CDX93481 Canola plasma membrane 49.37 44.65
CDY20671 Canola extracellular, plasma membrane, vacuole 50.63 44.18
CDY14723 Canola cytosol 31.49 39.31
CDX94950 Canola nucleus 45.84 31.93
CDX70627 Canola cytosol, nucleus, plasma membrane 64.99 30.07
CDX87194 Canola mitochondrion 15.11 28.71
CDY09102 Canola cytosol 13.6 20.69
CDY19626 Canola mitochondrion 19.14 18.45
CDY32210 Canola plasma membrane 28.46 17.12
CDY34424 Canola plasma membrane 28.21 17.0
CDY52722 Canola endoplasmic reticulum, plasma membrane, vacuole 27.96 16.69
CDY49611 Canola plasma membrane 27.46 16.47
CDY00037 Canola plasma membrane 27.46 16.47
CDX97377 Canola endoplasmic reticulum, golgi, vacuole 27.46 16.39
CDY29275 Canola extracellular, plasma membrane, vacuole 27.46 16.39
CDY36030 Canola vacuole 26.7 16.36
CDY34980 Canola endoplasmic reticulum, plasma membrane, vacuole 27.46 16.34
CDY57659 Canola cytosol 6.3 16.34
CDX89278 Canola extracellular, golgi, vacuole 26.95 16.14
CDY14283 Canola endoplasmic reticulum, plasma membrane, vacuole 27.2 15.81
CDX82237 Canola endoplasmic reticulum, vacuole 26.45 15.72
CDY55591 Canola plasma membrane 26.95 12.86
CDY43072 Canola plasma membrane 26.95 12.66
Protein Annotations
MapMan:21.1.2.2GO:A0A078JU45UniProt:A0A078JU45EnsemblPlants:CDY70289ProteinID:CDY70289ProteinID:CDY70289.1
InterPro:COBRA_plnGO:GO:0000003GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005794GO:GO:0005886GO:GO:0005975GO:GO:0007275GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009664GO:GO:0009791GO:GO:0009832GO:GO:0009987GO:GO:0010214
GO:GO:0010215GO:GO:0016020GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007
GO:GO:0046658GO:GO:0048316GO:GO:0048354GO:GO:0052324EnsemblPlantsGene:GSBRNA2T00097879001PFAM:PD140986
PFAM:PF04833PIRSF:PIRSF038122PANTHER:PTHR31673PANTHER:PTHR31673:SF3SignalP:SignalP-noTMUniParc:UPI0004EE0DCB
SEG:seg:::::
Description
BnaAnng33230DBnaAnng33230D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JU45]
Coordinates
chrLK041687:+:816..3402
Molecular Weight (calculated)
44772.5 Da
IEP (calculated)
9.331
GRAVY (calculated)
-0.277
Length
397 amino acids
Sequence
(BLAST)
001: MKILLSKFSV LFLFLLSWTS FTTTEAYDAL DPTGNITIKW DILSWTPDGY VARVTIFNYQ QYRHIESPGW QLGWTWLKKE VIWNMVGAQA TEQGDCSKFK
101: GDPPHCCKKT PTVVDLLPGT PYNHQISNCC RGGVVSAWAQ DSATAVSAFQ ISVGQSGTTN TTVRAPRNIT LKAPGPGYTC GPAKTVAPTK FFSDDKRRKT
201: QAMLTWNMTC TYSQFLAKKS PTCCVSLSSF YNETIVPCPT CSCGCQNNSQ TGTCVNQKIA SVIQASGKNN HQPLLQCTQH MCPIRVHWHV KTNYKEYWRV
301: KVAITNFNYN MNYSLWNMVA QHPNFDNVTK LFSFNYKPLS PYAGINDTAI LWGIKFYNDM LSQAGPLGNV QSEILFRKSP SKFTLDKGWA FPRRIYF
Best Arabidopsis Sequence Match ( AT3G29810.1 )
(BLAST)
001: MNILFSRFSF LLLFLCSWTS FTFTTTEAYD ALDPYGNITI KWDIMSWTGD GYVAVVTIFN FQQYRHIEAP GWQLGWSWMK KEVIWSMVGG QATEQGDCSK
101: FKGNIPHCCK KTPAIVDLLP GTPYNQQISN CCRGGVISAW AQDPATAISS FQISVGQSGT TNTTVRAPRN ITLKAPGPGY TCGPAKLVKP SRFISADKRR
201: KTQSLLTWNI TCTYSQFLAR KTPTCCVSLS AFYNETIVPC PTCSCGCQNS SQAGTCVDPK IASVVPALGK NNLEPLLQCT QHMCPIRVHW HVKTSYKEYW
301: RVKVAITNFN YNMNYSQWNL VVQHPNFDNL TKLFSFNYKP LNPYLNINDT AMLWGIKFYN DFLSQAGPVG NVQSELLFQK NPLEFTFEKG WAFPRRIYFN
401: GDNCVMPPPD SYPWLPNASP NIATSPFVIL LITFLSVLIL M
Arabidopsis Description
COBL3COBRA-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Q7]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.