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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:plastid, secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:plastid
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G402000.1 Wheat extracellular 64.16 78.51
TraesCS5B01G397000.2 Wheat extracellular 63.44 77.97
Zm00001d031479_P001 Maize cytosol, mitochondrion 44.09 75.0
CDY24004 Canola cytosol, nucleus, plastid 16.13 52.94
CDY29033 Canola cytosol 34.41 52.75
KRH56778 Soybean extracellular 36.92 49.28
HORVU2Hr1G033080.1 Barley extracellular 31.9 48.37
HORVU5Hr1G095910.12 Barley extracellular, vacuole 69.89 42.39
Zm00001d013256_P001 Maize extracellular 66.67 41.43
EER90860 Sorghum extracellular, golgi, plasma membrane 65.59 40.76
Zm00001d034049_P002 Maize endoplasmic reticulum, plasma membrane, vacuole 65.95 40.71
VIT_17s0000g05070.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 59.86 36.62
VIT_14s0083g01160.t01 Wine grape vacuole 56.63 36.24
KRH63181 Soybean endoplasmic reticulum 58.78 35.96
KRH54735 Soybean endoplasmic reticulum 58.78 35.96
CDY70289 Canola extracellular 50.9 35.77
Solyc02g065770.2.1 Tomato extracellular 56.63 35.59
PGSC0003DMT400068328 Potato extracellular 55.91 35.14
CDX86358 Canola extracellular 54.84 35.09
CDX85277 Canola extracellular 54.84 35.09
Bra025406.1-P Field mustard extracellular 54.84 35.09
GSMUA_Achr4P01440_001 Banana extracellular, plasma membrane 56.99 34.79
AT3G29810.1 Thale cress extracellular 54.84 34.69
GSMUA_Achr1P24500_001 Banana endoplasmic reticulum, plasma membrane, vacuole 56.63 34.5
KRH45084 Soybean extracellular, golgi, plasma membrane 55.2 34.38
KRH01360 Soybean extracellular, golgi, plasma membrane 55.2 34.38
Os10t0497700-01 Rice extracellular 52.33 34.35
Solyc02g089120.2.1 Tomato extracellular 54.84 34.23
PGSC0003DMT400003470 Potato extracellular 54.84 34.23
CDX87193 Canola plasma membrane 55.2 33.77
KRH03165 Soybean extracellular 54.84 33.7
CDY16831 Canola plasma membrane 55.2 33.62
GSMUA_Achr2P06240_001 Banana mitochondrion 56.99 33.33
CDY14723 Canola cytosol 37.99 33.33
Bra040587.1-P Field mustard extracellular 52.33 33.26
Bra035951.1-P Field mustard plasma membrane 54.48 33.19
KRG93684 Soybean extracellular, vacuole 53.76 33.04
Bra012996.1-P Field mustard plasma membrane 53.76 32.82
CDY02184 Canola plasma membrane 53.76 32.82
CDY58691 Canola plasma membrane 53.76 32.75
AT5G60920.1 Thale cress endoplasmic reticulum, plasma membrane, plastid 53.41 32.68
KRH18352 Soybean plasma membrane 53.41 32.53
Bra039163.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 51.97 31.87
HORVU4Hr1G014530.1 Barley extracellular 52.33 31.53
CDY60470 Canola plasma membrane 51.61 31.44
AT3G02210.1 Thale cress extracellular 50.9 31.42
CDY43250 Canola plasma membrane 51.25 31.29
KRH72178 Soybean mitochondrion 38.71 29.27
HORVU5Hr1G067940.1 Barley plasma membrane, plastid 47.31 27.97
HORVU0Hr1G004650.3 Barley mitochondrion 41.58 27.95
HORVU2Hr1G033070.14 Barley mitochondrion 46.24 27.45
HORVU3Hr1G007580.2 Barley extracellular 36.2 26.93
HORVU2Hr1G033060.13 Barley mitochondrion 43.01 26.85
HORVU2Hr1G092510.1 Barley mitochondrion 29.03 25.31
HORVU3Hr1G009960.1 Barley plastid 10.04 12.84
HORVU2Hr1G015440.1 Barley cytosol 23.3 11.8
HORVU0Hr1G030030.1 Barley extracellular, plasma membrane 25.09 10.59
HORVU7Hr1G028350.1 Barley golgi, mitochondrion, plasma membrane 25.09 10.42
HORVU4Hr1G054770.1 Barley plastid 25.81 9.11
Bra029346.1-P Field mustard cytosol, plasma membrane, plastid 2.51 5.69
CDY42842 Canola cytosol 1.79 4.1
Protein Annotations
EnsemblPlants:HORVU5Hr1G096010.13EnsemblPlantsGene:HORVU5Hr1G096010GO:GO:0005575GO:GO:0008150GO:GO:0009987GO:GO:0010215
GO:GO:0016020GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007InterPro:COBRA_pln
PANTHER:PTHR31673PANTHER:PTHR31673:SF3PFAM:PD140986PFAM:PF04833SEG:segSignalP:SignalP-noTM
UniParc:UPI000B47FC41UniProt:A0A287SDM4MapMan:21.1.2.2:::
Description
No Description!
Coordinates
chrchr5H:-:600194975..600199435
Molecular Weight (calculated)
30247.3 Da
IEP (calculated)
8.915
GRAVY (calculated)
0.029
Length
279 amino acids
Sequence
(BLAST)
001: MAPVSGVAGS SRSAACCAVL LTVVLFFSAP ATTAEAYDSL DPNGNITIKW DIISWTPDGY VATVTIFNYQ QFRHISAPGW QLGWSWAKKE VIWSIAGALA
101: TEQGDCSKFK SAPPHCCKRD PTIVDLLPGT PFNQQIANCC KAGVIKTFNQ DPGNAASSFQ ISVGLAGTTN KTVKMPKNFT LKAPDPGYTC GRALVGRPTR
201: YYSSDGRRVT QALSKLPTYC SSLLALYCLN TFRMNSDFLR GENPRSSIGQ RQHLCIVFFL KTLLLENLFC ISGVVFSGG
Best Arabidopsis Sequence Match ( AT3G02210.1 )
(BLAST)
001: MGFFLCSSSS IFFKFGISII FLVSFSGLTP SEAYDPLDPS GNITVKWDII TWTGDGYVAT VTVYNFQQYR HIQAPGWTLG WSWAKREVIW GMNGGQTTEQ
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL
Arabidopsis Description
COBL1COBL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VHK7]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.