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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
iPSORT:plastid
MultiLoc:mitochondrion
TargetP:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G033060.13 Barley mitochondrion 91.81 85.23
TraesCS2D01G182400.1 Wheat plasma membrane 79.28 73.6
TraesCS2B01G201400.1 Wheat plasma membrane 78.55 72.77
TraesCS2A01G175000.1 Wheat plasma membrane 77.11 71.27
HORVU3Hr1G009960.1 Barley plastid 33.73 64.22
Zm00001d022082_P001 Maize extracellular, plasma membrane, vacuole 69.16 64.21
EER99679 Sorghum plasma membrane 68.67 63.9
PGSC0003DMT400082702 Potato extracellular 37.83 63.31
Os07t0604400-00 Rice extracellular 68.19 62.75
KRH45086 Soybean plasma membrane 59.76 57.54
KRH01361 Soybean extracellular, plasma membrane, vacuole 59.76 57.54
AT5G15630.1 Thale cress extracellular, plasma membrane, vacuole 59.28 57.08
GSMUA_Achr4P03210_001 Banana endoplasmic reticulum, extracellular, plasma membrane 61.2 56.82
VIT_14s0083g01150.t01 Wine grape plasma membrane 58.8 56.61
Bra023528.1-P Field mustard extracellular, plasma membrane, vacuole 59.04 56.45
Solyc03g070440.2.1 Tomato extracellular 58.55 56.38
PGSC0003DMT400002674 Potato plasma membrane 58.8 56.22
PGSC0003DMT400003723 Potato extracellular 58.55 55.99
HORVU2Hr1G033080.1 Barley extracellular 24.82 55.98
GSMUA_Achr4P14440_001 Banana plasma membrane 61.69 55.9
Solyc02g089130.2.1 Tomato extracellular 58.31 55.76
KRG93686 Soybean extracellular, plasma membrane, vacuole 56.87 54.76
Solyc03g114900.2.1 Tomato extracellular 58.8 54.59
Bra008684.1-P Field mustard extracellular 50.84 54.52
PGSC0003DMT400063055 Potato extracellular, mitochondrion 58.55 53.41
VIT_17s0000g05050.t01 Wine grape cytosol 7.71 53.33
HORVU3Hr1G007580.2 Barley extracellular 46.02 50.93
CDY26445 Canola cytosol 20.0 49.11
HORVU5Hr1G095910.12 Barley extracellular, vacuole 53.01 47.83
KRH54737 Soybean plasma membrane 51.81 46.94
KRH63180 Soybean plasma membrane 51.33 46.51
Bra012993.1-P Field mustard endoplasmic reticulum, extracellular 22.17 44.66
AT5G60950.1 Thale cress endoplasmic reticulum 20.96 42.65
KRH18350 Soybean cytosol 18.07 42.13
HORVU4Hr1G014530.1 Barley extracellular 46.99 42.12
HORVU5Hr1G096010.13 Barley endoplasmic reticulum 27.95 41.58
HORVU5Hr1G067940.1 Barley plasma membrane, plastid 47.23 41.53
HORVU2Hr1G033070.14 Barley mitochondrion 46.51 41.06
VIT_17s0000g05060.t01 Wine grape plasma membrane 60.72 27.07
HORVU2Hr1G092510.1 Barley mitochondrion 16.39 21.25
HORVU2Hr1G015440.1 Barley cytosol 22.89 17.24
HORVU0Hr1G030030.1 Barley extracellular, plasma membrane 23.86 14.98
HORVU7Hr1G028350.1 Barley golgi, mitochondrion, plasma membrane 23.13 14.29
Solyc02g064790.1.1 Tomato extracellular, vacuole 2.17 13.04
HORVU4Hr1G054770.1 Barley plastid 23.37 12.28
Protein Annotations
EnsemblPlants:HORVU0Hr1G004650.3EnsemblPlantsGene:HORVU0Hr1G004650GO:GO:0005575GO:GO:0008150GO:GO:0009987GO:GO:0010215
GO:GO:0016020GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007InterPro:COBRA_pln
ncoils:CoilPANTHER:PTHR31673PANTHER:PTHR31673:SF20PFAM:PD140986PFAM:PF04833SEG:seg
UniParc:UPI000B475E7BUniProt:A0A287DVQ0MapMan:21.1.2.2:::
Description
No Description!
Coordinates
chrchrUn:+:26671836..26673448
Molecular Weight (calculated)
42530.8 Da
IEP (calculated)
10.097
GRAVY (calculated)
-0.388
Length
415 amino acids
Sequence
(BLAST)
001: GAPQRRPRAD PRRGGHALRR RFVIGLRPAG SQREHHHQMG RPVVDARRIR RELVTINNFQ TYRQIMAPGW TVGWTWAKRE VIWSMVGAQA TEQGDCSKFK
101: ANLPHSCKRT PAVVDLLPGV PYNQQIANCC RGGVVSAYGQ DPSGAVSSFQ VSVGQAGTTN RTVKVPKNFT LLGPGPGYTC GPAKVVPSTV FLTADHRRKT
201: QALMTWNVTC TYSQHLASKY PTCCVSFSSF YNDTIVPCAK CTCGCEHKTC ARSERDSKRL MSASGKSAVT ARGHVNRQSA APLLQCTTHM CPVRVHWHVK
301: LNYHDYWRAK VTVTNFNYRM NYTGWTLVAQ HPNLDNITEV FSFDYKPVVS YGSINDTALF YGMKFFNDQL MEAGPYGNVQ SXXXXXXXXX XXXXXXXXXX
401: XXXXXXXXXX XXXXX
Best Arabidopsis Sequence Match ( AT5G15630.1 )
(BLAST)
001: MRLLFSFCFF FFMIIFTATA YDPLDPSGNI TIKWDIMSWT ADGYVATVTM NNFQIYRHIQ NPGWTLGWTW AKKEVIWSMV GAQTTEQGDC SKFKGNVPHC
101: CKKTPTVVDL LPGVPYNQQF SNCCKGGVIG AWGQDPSAAV SQFQVSAGLA GTTNKTVKLP KNFTLLGPGP GYTCGPAKIV PSTVFLTTDK RRKTQALMTW
201: NVTCTYSQFL ARKHPSCCVS FSSFYNDTIT PCPSCACGCE NKKSCVKADS KILTKKGLNT PKKDNTPLLQ CTHHMCPVRV HWHVKTNYKD YWRVKIAITN
301: FNYRMNHTLW TLAIQHPNLN NVTQVFSFDY KPVSPYGSIN DTGMFYGTKF YNDLLMEAGP SGNVQSEVLL QKDQKTFTFK QGWAFPRKVY FNGDECMLPP
401: PDSYPFLPNS AQGNFASFSL TILLLLFISI W
Arabidopsis Description
COBL4COBRA-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFW3]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.