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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 5
  • plastid 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_14s0083g01150.t01 Wine grape plasma membrane 36.2 78.19
Solyc03g114900.2.1 Tomato extracellular 36.2 75.39
GSMUA_Achr4P03210_001 Banana endoplasmic reticulum, extracellular, plasma membrane 35.88 74.72
PGSC0003DMT400063055 Potato extracellular, mitochondrion 36.3 74.29
GSMUA_Achr4P14440_001 Banana plasma membrane 36.09 73.36
EER94687 Sorghum extracellular 33.83 70.63
TraesCS5D01G107900.1 Wheat extracellular 33.83 70.16
TraesCS5A01G095200.1 Wheat extracellular 33.83 70.16
TraesCS5B01G101400.1 Wheat extracellular 33.83 70.0
Zm00001d047276_P001 Maize plasma membrane 33.73 69.78
TraesCS2B01G201400.1 Wheat plasma membrane 33.51 69.64
TraesCS2D01G182400.1 Wheat plasma membrane 33.08 68.9
EER99679 Sorghum plasma membrane 32.98 68.83
TraesCS2A01G175000.1 Wheat plasma membrane 32.76 67.93
Zm00001d022082_P001 Maize extracellular, plasma membrane, vacuole 32.55 67.79
Os03t0416200-01 Rice extracellular, golgi, plasma membrane 33.94 67.52
HORVU3Hr1G007580.2 Barley extracellular 27.18 67.47
VIT_17s0000g05050.t01 Wine grape cytosol 4.3 66.67
HORVU3Hr1G009960.1 Barley plastid 15.36 65.6
VIT_14s0083g01160.t01 Wine grape vacuole 30.72 65.6
Os07t0604400-00 Rice extracellular 31.36 64.75
HORVU2Hr1G033060.13 Barley mitochondrion 30.93 64.43
VIT_17s0000g05070.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 30.83 62.94
TraesCSU01G047200.1 Wheat plastid 15.68 62.93
TraesCS3D01G047900.1 Wheat plastid 16.33 61.04
HORVU0Hr1G004650.3 Barley mitochondrion 27.07 60.72
HORVU2Hr1G033080.1 Barley extracellular 10.85 54.89
VIT_12s0035g00630.t01 Wine grape extracellular, plasma membrane 22.66 48.96
VIT_03s0038g01430.t01 Wine grape mitochondrion 7.41 41.82
VIT_03s0038g01420.t01 Wine grape extracellular, plasma membrane 11.06 41.2
VIT_07s0005g01020.t01 Wine grape plasma membrane 13.53 19.47
VIT_19s0177g00160.t01 Wine grape plasma membrane 13.32 18.93
VIT_05s0077g01470.t01 Wine grape plasma membrane 13.21 18.89
VIT_10s0116g00620.t01 Wine grape extracellular 12.57 17.89
Protein Annotations
EntrezGene:100250060wikigene:100250060EntrezGene:100258803wikigene:100258803MapMan:21.1.2.2ProteinID:CCB43149
ProteinID:CCB43149.1InterPro:COBRA_plnUniProt:F6GTE0EMBL:FN594950GO:GO:0005575GO:GO:0008150
GO:GO:0009987GO:GO:0010215GO:GO:0016020GO:GO:0016021GO:GO:0016043GO:GO:0016049
GO:GO:0031225GO:GO:0040007EntrezGene:LOC100250060wikigene:LOC100250060EntrezGene:LOC100258803wikigene:LOC100258803
PFAM:PD140986PFAM:PF04833PANTHER:PTHR31673PANTHER:PTHR31673:SF2TIGR:TC53078TIGR:TC56692
TIGR:TC68223TMHMM:TMhelixUniParc:UPI000210A5E1ArrayExpress:VIT_17s0000g05060EnsemblPlantsGene:VIT_17s0000g05060EnsemblPlants:VIT_17s0000g05060.t01
unigene:Vvi.4683RefSeq:XP_002264378RefSeq:XP_002264378.1RefSeq:XP_002265282RefSeq:XP_002265282.2SEG:seg
Description
No Description!
Coordinates
chr17:+:5529705..5544384
Molecular Weight (calculated)
104888.0 Da
IEP (calculated)
8.400
GRAVY (calculated)
-0.137
Length
931 amino acids
Sequence
(BLAST)
001: MTINQMSVTD ISIINHRNIH IMEFNRVAYS IVSAVFFSMV LSPAVAYDPL DPNGNITIKW DVMSWTSDGY VAVVTMSNFQ MYRHIMSPGW TLGWIWAKKE
101: VIWSMVGAQA TEQGDCSKFK GNIPHCCKRN PTVIDLLPGV PYNQQIANCC KGGVVASWGQ DSSAAVSSFQ LSVGLSGTSN KTVRLPKNFT LLGPGPGYTC
201: GQAKTVPSSI FLSSDGRRKT QALMTWNVTC TYSQMVVSKY PSCCVSFSSF YNSTITPCTS CACGCQNKNN CIMSDTKIES VVGLHTPTKD NMPLLQCTQH
301: NCPVRVHWHV KVNYKEYWRV KITITNFNYR MNYTQWTLVA QHPNLNNITQ VFSFAYKPLI PYTSINDSGM FYGIKFYNDV LMEDGPDGNV QSEMILQKDK
401: NTFTLKEGWA FPQRIYFNGD ECMMPLPDSY PLLAGSAPAN QIALSTLASL VLLILLAFQA FDLGELIFVM EFNNSANPVH HTPFEAKDRC QWQDCYSFRE
501: LKHIFSVVIF FMMVSHAIAY DPLDPTGNIT IKWDVVSWTP DGYVALVTMN NFQMYRHIMT PGWTLSWSWA KKEVIWSMVG AQTTEQGDCS KFKANIPHCC
601: EKTPTVVDLL PGVPYNQQIA NCCKAGVVAA WGQDPAGSVS SFQVSVGQAG TSNKTVKLPK NFTLLGPGPG YTCGPAKIVP STIYLTPDHR RKTQAMMTWN
701: VTCTYSQFLA SKNPTCCVSF SSFYNDTMTP CPSCACGCRN KNMCISSDSK KLKALHNPKR SNTPLLQCTH HMCPIRVHWH VKLNYKDYWR VKIAITNFNY
801: RMNYTQWTLV AQHPNLNNVT QVFSFDYKPL VPYESINDTG MFYGMKFYND LLVEAGQHGN VQSEVLLQKN KDTFTFKQGW AFPRKVYFNG DECKLPPPDT
901: YPFLPNSAHA NPFAFWTMAA PLLLMILYTI W
Best Arabidopsis Sequence Match ( AT5G15630.1 )
(BLAST)
001: MRLLFSFCFF FFMIIFTATA YDPLDPSGNI TIKWDIMSWT ADGYVATVTM NNFQIYRHIQ NPGWTLGWTW AKKEVIWSMV GAQTTEQGDC SKFKGNVPHC
101: CKKTPTVVDL LPGVPYNQQF SNCCKGGVIG AWGQDPSAAV SQFQVSAGLA GTTNKTVKLP KNFTLLGPGP GYTCGPAKIV PSTVFLTTDK RRKTQALMTW
201: NVTCTYSQFL ARKHPSCCVS FSSFYNDTIT PCPSCACGCE NKKSCVKADS KILTKKGLNT PKKDNTPLLQ CTHHMCPVRV HWHVKTNYKD YWRVKIAITN
301: FNYRMNHTLW TLAIQHPNLN NVTQVFSFDY KPVSPYGSIN DTGMFYGTKF YNDLLMEAGP SGNVQSEVLL QKDQKTFTFK QGWAFPRKVY FNGDECMLPP
401: PDSYPFLPNS AQGNFASFSL TILLLLFISI W
Arabidopsis Description
COBL4COBRA-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFW3]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.