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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
TargetP:secretory
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400082702 Potato extracellular 54.89 40.73
Bra012993.1-P Field mustard endoplasmic reticulum, extracellular 39.13 34.95
AT5G60950.1 Thale cress endoplasmic reticulum 38.59 34.8
HORVU5Hr1G096010.13 Barley endoplasmic reticulum 48.37 31.9
TraesCS2A01G175000.1 Wheat plasma membrane 77.17 31.63
TraesCS2D01G182400.1 Wheat plasma membrane 76.63 31.54
TraesCS2B01G201400.1 Wheat plasma membrane 76.63 31.47
Zm00001d022082_P001 Maize extracellular, plasma membrane, vacuole 69.02 28.41
EER99679 Sorghum plasma membrane 67.93 28.03
Os07t0604400-00 Rice extracellular 66.85 27.27
HORVU3Hr1G007580.2 Barley extracellular 53.26 26.13
Bra008684.1-P Field mustard extracellular 53.26 25.32
HORVU0Hr1G004650.3 Barley mitochondrion 55.98 24.82
GSMUA_Achr4P03210_001 Banana endoplasmic reticulum, extracellular, plasma membrane 59.78 24.61
GSMUA_Achr4P14440_001 Banana plasma membrane 60.87 24.45
KRH45086 Soybean plasma membrane 56.52 24.13
KRH01361 Soybean extracellular, plasma membrane, vacuole 56.52 24.13
KRG93686 Soybean extracellular, plasma membrane, vacuole 55.43 23.67
PGSC0003DMT400002674 Potato plasma membrane 54.89 23.27
AT5G15630.1 Thale cress extracellular, plasma membrane, vacuole 54.35 23.2
Solyc03g070440.2.1 Tomato extracellular 54.35 23.2
HORVU2Hr1G033060.13 Barley mitochondrion 55.98 23.04
VIT_14s0083g01150.t01 Wine grape plasma membrane 53.8 22.97
Bra023528.1-P Field mustard extracellular, plasma membrane, vacuole 53.8 22.81
Solyc02g089130.2.1 Tomato extracellular 53.8 22.81
PGSC0003DMT400003723 Potato extracellular 53.26 22.58
HORVU2Hr1G092510.1 Barley mitochondrion 37.5 21.56
Solyc03g114900.2.1 Tomato extracellular 52.17 21.48
PGSC0003DMT400063055 Potato extracellular, mitochondrion 51.09 20.66
KRH54737 Soybean plasma membrane 48.37 19.43
KRH63180 Soybean plasma membrane 48.37 19.43
HORVU5Hr1G095910.12 Barley extracellular, vacuole 48.37 19.35
HORVU4Hr1G014530.1 Barley extracellular 45.11 17.93
HORVU5Hr1G067940.1 Barley plasma membrane, plastid 45.65 17.8
HORVU2Hr1G033070.14 Barley mitochondrion 44.57 17.45
VIT_17s0000g05060.t01 Wine grape plasma membrane 54.89 10.85
HORVU2Hr1G015440.1 Barley cytosol 19.57 6.53
HORVU7Hr1G028350.1 Barley golgi, mitochondrion, plasma membrane 22.83 6.25
Solyc02g064790.1.1 Tomato extracellular, vacuole 2.17 5.8
HORVU0Hr1G030030.1 Barley extracellular, plasma membrane 20.11 5.6
HORVU4Hr1G054770.1 Barley plastid 19.57 4.56
HORVU3Hr1G009960.1 Barley plastid 1.63 1.38
CDY26445 Canola cytosol 1.09 1.18
VIT_17s0000g05050.t01 Wine grape cytosol 0.0 0.0
KRH18350 Soybean cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:HORVU2Hr1G033080.1EnsemblPlantsGene:HORVU2Hr1G033080GO:GO:0005575GO:GO:0008150GO:GO:0009987GO:GO:0010215
GO:GO:0016020GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007InterPro:COBRA_pln
PANTHER:PTHR31673PANTHER:PTHR31673:SF20PFAM:PD140986PFAM:PF04833SEG:segSignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI000B4807E7UniProt:A0A287HMA9MapMan:21.1.2.2::
Description
No Description!
Coordinates
chrchr2H:-:130916557..130917458
Molecular Weight (calculated)
16233.4 Da
IEP (calculated)
4.986
GRAVY (calculated)
0.060
Length
184 amino acids
Sequence
(BLAST)
001: MELPNAALVL ILAAAATLSV AVAYDPLDPN GNITIKWDVL SWTPDGYVVS LTINNFQTYR QIMAPGWTVG WTWAKREVIW SMVGAQATEQ GDCSKFKANL
101: PHSCKRTPAV VDLLPGVPYN QQIANCCRGG VVSAYGQDPS GAXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXPLSF YPEC
Best Arabidopsis Sequence Match ( AT3G02210.1 )
(BLAST)
001: MGFFLCSSSS IFFKFGISII FLVSFSGLTP SEAYDPLDPS GNITVKWDII TWTGDGYVAT VTVYNFQQYR HIQAPGWTLG WSWAKREVIW GMNGGQTTEQ
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL
Arabidopsis Description
COBL1COBL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VHK7]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.