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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX85543 Canola extracellular, plasma membrane, vacuole 99.31 94.52
Bra008684.1-P Field mustard extracellular 83.41 93.54
AT5G15630.1 Thale cress extracellular, plasma membrane, vacuole 91.94 92.58
KRG93686 Soybean extracellular, plasma membrane, vacuole 79.03 79.58
KRH45086 Soybean plasma membrane 78.8 79.35
VIT_14s0083g01150.t01 Wine grape plasma membrane 78.34 78.89
KRH01361 Soybean extracellular, plasma membrane, vacuole 78.34 78.89
PGSC0003DMT400003723 Potato extracellular 78.11 78.11
PGSC0003DMT400082702 Potato extracellular 44.47 77.82
KRH18350 Soybean cytosol 31.8 77.53
PGSC0003DMT400002674 Potato plasma membrane 76.04 76.04
GSMUA_Achr4P03210_001 Banana endoplasmic reticulum, extracellular, plasma membrane 74.19 72.04
GSMUA_Achr4P14440_001 Banana plasma membrane 74.42 70.52
EER99679 Sorghum plasma membrane 71.2 69.28
EER94687 Sorghum extracellular 71.2 69.28
Zm00001d022082_P001 Maize extracellular, plasma membrane, vacuole 70.51 68.46
TraesCS2A01G175000.1 Wheat plasma membrane 70.74 68.37
TraesCS2D01G182400.1 Wheat plasma membrane 70.28 68.23
TraesCS5D01G107900.1 Wheat extracellular 70.28 67.93
TraesCS2B01G201400.1 Wheat plasma membrane 70.05 67.86
Zm00001d047276_P001 Maize plasma membrane 70.05 67.56
TraesCS5A01G095200.1 Wheat extracellular 69.82 67.48
TraesCS5B01G101400.1 Wheat extracellular 69.82 67.33
HORVU3Hr1G007580.2 Barley extracellular 56.91 65.87
Os07t0604400-00 Rice extracellular 67.74 65.19
Os03t0416200-01 Rice extracellular, golgi, plasma membrane 70.28 65.17
Bra025406.1-P Field mustard extracellular 64.06 63.76
HORVU3Hr1G009960.1 Barley plastid 32.03 63.76
HORVU2Hr1G033060.13 Barley mitochondrion 65.44 63.53
Bra012996.1-P Field mustard plasma membrane 65.21 61.93
Bra040587.1-P Field mustard extracellular 61.75 61.05
Bra039163.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 63.59 60.66
Bra035951.1-P Field mustard plasma membrane 63.59 60.26
TraesCSU01G047200.1 Wheat plastid 32.03 59.91
HORVU0Hr1G004650.3 Barley mitochondrion 56.45 59.04
TraesCS3D01G047900.1 Wheat plastid 33.87 59.04
Bra012993.1-P Field mustard endoplasmic reticulum, extracellular 25.58 53.88
HORVU2Hr1G033080.1 Barley extracellular 22.81 53.8
Bra035948.1-P Field mustard cytosol 11.75 52.58
Bra029346.1-P Field mustard cytosol, plasma membrane, plastid 14.75 52.03
Bra030800.1-P Field mustard cytosol 47.0 48.92
Bra019992.1-P Field mustard cytosol 43.55 47.61
Bra035768.1-P Field mustard mitochondrion, peroxisome, plastid 22.12 25.26
Bra020151.1-P Field mustard cytosol 12.44 20.85
Bra023941.1-P Field mustard plasma membrane 29.95 19.35
Bra021208.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 29.26 19.04
Bra001795.1-P Field mustard endoplasmic reticulum, vacuole 29.03 18.86
Bra033528.1-P Field mustard plasma membrane 28.57 18.82
Bra036147.1-P Field mustard plasma membrane 28.57 18.73
Bra026378.1-P Field mustard extracellular, golgi, vacuole 28.11 18.68
Bra010411.1-P Field mustard endoplasmic reticulum, golgi, vacuole 27.42 17.95
Protein Annotations
EnsemblPlants:Bra023528.1EnsemblPlants:Bra023528.1-PEnsemblPlantsGene:Bra023528GO:GO:0005575GO:GO:0008150GO:GO:0009987
GO:GO:0010215GO:GO:0016020GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007
InterPro:COBRA_plnPANTHER:PTHR31673PANTHER:PTHR31673:SF2PFAM:PD140986PFAM:PF04833PIRSF:PIRSF038122
SEG:segSignalP:SignalP-noTMUniParc:UPI0002543659UniProt:M4E425MapMan:21.1.2.2:
Description
AT5G15630 (E=3e-242) COBL4, IRX6 | IRX6
Coordinates
chrA02:+:3794312..3796425
Molecular Weight (calculated)
48578.4 Da
IEP (calculated)
8.941
GRAVY (calculated)
-0.148
Length
434 amino acids
Sequence
(BLAST)
001: MNLFFCSCFF FMIIFSTSSA YDPLDPNGNI TLKWDIMSWT ADGYVATVTM NNFQIYRHIQ NPGWTLGWAW AKKEVIWSMV GAQTTEQGDC SKFKGNVPHC
101: CKKIPTVVDL LPGVPYNQQF SNCCKGGVVG AWGQDPSSAV SQFQVSVGLA GTTNKTVKLP KNFTLLGPGP GYSCGPAKIV PSTVFLTTDK RRKTQALMTW
201: NVTCTYSQFL ARKHPSCCVS FSSFYNDTIT PCPSCACGCE NKKSCVKADS KILTKKGLNT PRKDNAPLLQ CTHHMCPVRV HWHVKTNYKD YWRVKIAITN
301: FNYRMNHTLW TLAVQHPNLN NVTQVFSFDY KSVAPYGSIN DTGMFFGTKF YNDLLMEAGP SGNVQSEVLL QKDEKTFTFK QGWAFPRKVY FNGDECMLPP
401: PDAYPFLPNS ARGNLASLWT LSLTVLLVVF ISSL
Best Arabidopsis Sequence Match ( AT5G15630.1 )
(BLAST)
001: MRLLFSFCFF FFMIIFTATA YDPLDPSGNI TIKWDIMSWT ADGYVATVTM NNFQIYRHIQ NPGWTLGWTW AKKEVIWSMV GAQTTEQGDC SKFKGNVPHC
101: CKKTPTVVDL LPGVPYNQQF SNCCKGGVIG AWGQDPSAAV SQFQVSAGLA GTTNKTVKLP KNFTLLGPGP GYTCGPAKIV PSTVFLTTDK RRKTQALMTW
201: NVTCTYSQFL ARKHPSCCVS FSSFYNDTIT PCPSCACGCE NKKSCVKADS KILTKKGLNT PKKDNTPLLQ CTHHMCPVRV HWHVKTNYKD YWRVKIAITN
301: FNYRMNHTLW TLAIQHPNLN NVTQVFSFDY KPVSPYGSIN DTGMFYGTKF YNDLLMEAGP SGNVQSEVLL QKDQKTFTFK QGWAFPRKVY FNGDECMLPP
401: PDSYPFLPNS AQGNFASFSL TILLLLFISI W
Arabidopsis Description
COBL4COBRA-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFW3]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.