Factsheet for Bra001795.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

nucleus 1
plasma membrane 4
mitochondrion 2
endoplasmic reticulum 3
extracellular 2
vacuole 3
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82237	Canola	endoplasmic reticulum, vacuole	99.55	99.55
CDY36030	Canola	vacuole	95.51	98.46
Bra023941.1-P	Field mustard	plasma membrane	93.11	92.56
AT3G20580.1	Thale cress	endoplasmic reticulum, vacuole	88.77	88.24
Bra035768.1-P	Field mustard	mitochondrion, peroxisome, plastid	49.85	87.63
Bra026378.1-P	Field mustard	extracellular, golgi, vacuole	66.62	68.15
Bra010411.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	67.07	67.57
VIT_10s0116g00620.t01	Wine grape	extracellular	58.98	60.24
PGSC0003DMT400002678	Potato	vacuole	58.83	59.46
VIT_19s0177g00160.t01	Wine grape	plasma membrane	58.23	59.39
Solyc07g064200.2.1	Tomato	extracellular, golgi, vacuole	54.49	59.19
Bra020151.1-P	Field mustard	cytosol	22.01	56.76
KRH22248	Soybean	golgi, vacuole	56.59	56.76
GSMUA_Achr3P21560_001	Banana	plasma membrane	55.54	56.55
KRH27088	Soybean	mitochondrion	56.44	56.18
GSMUA_Achr4P33540_001	Banana	vacuole	55.69	55.94
PGSC0003DMT400037398	Potato	vacuole	55.39	55.81
Solyc10g006450.2.1	Tomato	golgi, plasma membrane, vacuole	55.99	55.74
KXG36369	Sorghum	mitochondrion	54.19	53.79
Zm00001d021661_P001	Maize	mitochondrion	54.04	53.24
PGSC0003DMT400002688	Potato	cytosol	10.18	52.71
HORVU7Hr1G028350.1	Barley	golgi, mitochondrion, plasma membrane	52.69	52.38
TraesCS7A01G136600.1	Wheat	mitochondrion	52.84	52.37
TraesCS7D01G136500.1	Wheat	mitochondrion	52.69	52.23
Os06t0685100-00	Rice	plasma membrane	52.99	51.83
TraesCS7B01G037700.1	Wheat	mitochondrion	52.25	51.78
Bra033528.1-P	Field mustard	plasma membrane	49.1	49.77
Bra036147.1-P	Field mustard	plasma membrane	47.01	47.43
Bra021208.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	45.96	46.03
Bra023528.1-P	Field mustard	extracellular, plasma membrane, vacuole	18.86	29.03
Bra030800.1-P	Field mustard	cytosol	17.07	27.34
Bra008684.1-P	Field mustard	extracellular	15.72	27.13
Bra025406.1-P	Field mustard	extracellular	17.37	26.61
Bra012996.1-P	Field mustard	plasma membrane	17.66	25.82
Bra035948.1-P	Field mustard	cytosol	3.74	25.77
Bra040587.1-P	Field mustard	extracellular	16.92	25.74
Bra012993.1-P	Field mustard	endoplasmic reticulum, extracellular	7.93	25.73
Bra039163.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	17.52	25.71
Bra019992.1-P	Field mustard	cytosol	15.12	25.44
Bra035951.1-P	Field mustard	plasma membrane	17.07	24.89
Bra029346.1-P	Field mustard	cytosol, plasma membrane, plastid	4.04	21.95

Protein Annotations

EnsemblPlants:Bra001795.1	EnsemblPlants:Bra001795.1-P	EnsemblPlantsGene:Bra001795	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987
GO:GO:0010215	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007
InterPro:COBRA_pln	PANTHER:PTHR31052	PANTHER:PTHR31052:SF2	PFAM:PD140986	PFAM:PF04833	SEG:seg
SignalP:SignalP-noTM	UniParc:UPI00025405CE	UniProt:M4CC65	MapMan:21.1.2.2	:	:

Description

AT3G20580 (E=0.0) COBL10 | COBL10 (COBRA-LIKE PROTEIN 10 PRECURSOR)

Coordinates

chrA03:-:18506849..18509542

Molecular Weight (calculated)

74331.4 Da

IEP (calculated)

9.225

GRAVY (calculated)

-0.363

Length

668 amino acids

Sequence
(BLAST)

001: MKPIIKVKTG MKIPWDTRYS LSLLILLSST LFLCNGQDYG TPTEDGAGEP PPEMARCNGI FMSYSFGSRE REYPHVKNVT AQSWAFKSTA MIVNAGKEEL
101: TGWQMFIGFR HKELIVSATG AVPMDGDFPL DASNGTTFVG SPNTDLKTSI LTAGDFTQIS TNIEITGTLF GVAKSVMPMP KTLKLVNDGW ECPAAKRKGG
201: TMNVCCKRNP KFKVKTGPKT KFAPRRHGDL NIVYDVIQSF SSNYLAQVTI DNDNPLGRLD RWNLTWEWMR GEFINTMRGA YTHKRDPSEC LYSKAGQYYK
301: DLDFSQVMNC QKKPAISDLP PERKDDKVMG KLPFCCKNGT LLPPLMDPSK SRSMFQLQVW KLPPDLNRTA LYPPQHWKID GVLNPQYKCG PPVRVDPSQF
401: PDSSGLPAVT YAISSWQIVC NITKPKAQAS RCCVSFSAYY NNSAIPCNTC ACGCNDIDTN TCNADRNPLL LPPDALLVPF DNRTLKAKAW AKQNHMPIPK
501: KLPCPDNCGV SINWHVNTDY RNGWTARLTV FNWRDFAFED WFVAVEMGKS GKGYENVYSF NGTRVPPNNR TVMFQGLPGL NYLVGQVNGT HPLRDPPVPG
601: KQQSVISFTK KNINGLKIAE GDGFPTKLFF NGEECALPKH FPKKSSGHRG GISVLMSLVF AMATAFAL

Best Arabidopsis Sequence Match ( AT3G20580.1 )
(BLAST)

001: MRAIDVKTGM KIPWDVRYSL SLFIFLSSIL FLSNGQDYGM PGEDGGGGAE PPPEMAHCNG IFMSYNFGSR EREYPHVKNV TAQSWAFKST AMIVNAGREE
101: LKGWQMFIGF RHKELIVSAT GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM PRTIKLTNDG WECPAAKRKG
201: GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY
301: KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDPSGLLAV TYAISSWQVV CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPVP
501: KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP
601: GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV FATIAAFALM MD

Arabidopsis Description

COBL10COBRA-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJU0]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.