Factsheet for Solyc07g064200.2.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	golgi
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400002678	Potato	vacuole	92.85	86.38
Solyc10g006450.2.1	Tomato	golgi, plasma membrane, vacuole	71.22	65.28
Solyc02g080240.1.1	Tomato	extracellular	35.28	56.36
CDY19626	Canola	mitochondrion	37.56	56.07
CDY36030	Canola	vacuole	58.86	55.86
AT3G20580.1	Thale cress	endoplasmic reticulum, vacuole	60.0	54.91
VIT_10s0116g00620.t01	Wine grape	extracellular	58.21	54.74
VIT_19s0177g00160.t01	Wine grape	plasma membrane	58.05	54.5
Bra001795.1-P	Field mustard	endoplasmic reticulum, vacuole	59.19	54.49
CDX82237	Canola	endoplasmic reticulum, vacuole	59.02	54.34
Bra023941.1-P	Field mustard	plasma membrane	57.89	52.98
Bra035768.1-P	Field mustard	mitochondrion, peroxisome, plastid	32.68	52.89
GSMUA_Achr4P33540_001	Banana	vacuole	54.63	50.53
KRH27088	Soybean	mitochondrion	54.96	50.37
KRH22248	Soybean	golgi, vacuole	54.47	50.3
CDX97377	Canola	endoplasmic reticulum, golgi, vacuole	53.98	49.92
GSMUA_Achr3P21560_001	Banana	plasma membrane	53.17	49.85
CDY09102	Canola	cytosol	21.14	49.81
Bra010411.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	53.01	49.17
CDY29275	Canola	extracellular, plasma membrane, vacuole	52.68	48.72
CDX89278	Canola	extracellular, golgi, vacuole	52.52	48.72
Bra026378.1-P	Field mustard	extracellular, golgi, vacuole	51.71	48.7
AT4G27110.1	Thale cress	extracellular	52.85	48.65
CDY14283	Canola	endoplasmic reticulum, plasma membrane, vacuole	53.98	48.61
PGSC0003DMT400002688	Potato	cytosol	10.08	48.06
Bra020151.1-P	Field mustard	cytosol	20.16	47.88
TraesCS7D01G136500.1	Wheat	mitochondrion	52.36	47.77
Zm00001d021661_P001	Maize	mitochondrion	52.52	47.64
KXG36369	Sorghum	mitochondrion	51.87	47.4
TraesCS7B01G037700.1	Wheat	mitochondrion	51.87	47.33
TraesCS7A01G136600.1	Wheat	mitochondrion	51.87	47.33
HORVU7Hr1G028350.1	Barley	golgi, mitochondrion, plasma membrane	51.71	47.32
Solyc01g065530.2.1	Tomato	nucleus, plastid	49.59	47.07
Os06t0685100-00	Rice	plasma membrane	52.03	46.85
Solyc09g075540.1.1	Tomato	plasma membrane	46.67	44.02
CDY55591	Canola	plasma membrane	57.72	42.67
Solyc02g080250.1.1	Tomato	cytosol	23.58	42.4
CDY43072	Canola	plasma membrane	57.89	42.13
CDY57659	Canola	cytosol	8.13	32.68
Solyc03g114890.2.1	Tomato	extracellular	16.75	25.69
Solyc03g070440.2.1	Tomato	extracellular	17.72	25.29
Solyc02g089130.2.1	Tomato	extracellular	17.07	24.19
Solyc02g089120.2.1	Tomato	extracellular	17.24	23.71
Solyc03g114900.2.1	Tomato	extracellular	17.07	23.49
Solyc02g065770.2.1	Tomato	extracellular	16.91	23.42
Solyc03g070460.1.1	Tomato	cytosol	4.23	22.41
Solyc03g114910.2.1	Tomato	extracellular, plasma membrane, vacuole	16.42	22.05
Solyc01g103860.2.1	Tomato	cytosol	14.31	20.8
Solyc03g114880.1.1	Tomato	cytosol, extracellular, vacuole	10.24	19.75
Solyc01g111050.2.1	Tomato	cytosol	14.8	19.4
Solyc03g070450.1.1	Tomato	extracellular, vacuole	5.2	14.88
Solyc02g064790.1.1	Tomato	extracellular, vacuole	1.3	11.59

Protein Annotations

EnsemblPlants:Solyc07g064200.2.1	EnsemblPlantsGene:Solyc07g064200.2	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987	GO:GO:0010215
GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007	InterPro:COBRA_pln
PANTHER:PTHR31052	PANTHER:PTHR31052:SF2	PFAM:PD140986	PFAM:PF04833	PFscan:PS51257	SEG:seg
SignalP:SignalP-noTM	UniParc:UPI000276C41D	UniProt:K4CHA1	MapMan:21.1.2.2	:	:

Description

No Description!

Coordinates

chr7:+:66445970..66448471

Molecular Weight (calculated)

69112.9 Da

IEP (calculated)

8.753

GRAVY (calculated)

-0.381

Length

615 amino acids

Sequence
(BLAST)

001: MQIPWRNISW VVLVLVACSY QTCNGQDYGG DEKTVAAPPP EQENCDGIFI TYNFDGREKI YPLVKNVSAQ GWSFKSMLTV LNAGTFELKS WQVFIGFQHN
101: ELLVSADGAV AIDGDGFPVR VGKNGTTLAG YPQSDLKTAI DTAGDFTQMS AQINIKGTQF GLREKTNPMP STIKLVNEGY KCPAPKRYKS YMHVCCKRDL
201: KFKPKKVVTK FMPRRYGDLS ITYDVLSAFT NRYQAQVTLD NLNPLGRLDH WNLTWEWMRN EFINTIKGAH THKIDPSECI YGPQGQYYKD FDFTPVINCQ
301: KKPIISDLPK EKANDDKFGK LPYCCRNGTL LSPIMNETEA RSIFQMEVFK LPPDLNRTAL NPPQNWKITG TINPSYSCGP PVRIDPSVFP DPKGIGIATA
401: VASWQITCNI TRPKPKAAKC CVSFSAYYAA SVIPCNTCAC GCEETSKCDA NKKPLLLPPE ALLVPFENRD LMAKAWSNIK HLGPMPKKLP CPDNCGVSIN
501: WHVDSNYKTG WTARITLFNW GNDAFENWFS AIQMKKDVAN GYENVYSFNG TRLPKEKSNT IFMQGLPGLK FLVGEVNGTN PNKDPRNARF HQSFLKTLQH
601: SNPNLVFFQQ FCLLS

Best Arabidopsis Sequence Match ( AT3G20580.1 )
(BLAST)

001: MRAIDVKTGM KIPWDVRYSL SLFIFLSSIL FLSNGQDYGM PGEDGGGGAE PPPEMAHCNG IFMSYNFGSR EREYPHVKNV TAQSWAFKST AMIVNAGREE
101: LKGWQMFIGF RHKELIVSAT GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM PRTIKLTNDG WECPAAKRKG
201: GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY
301: KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDPSGLLAV TYAISSWQVV CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPVP
501: KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP
601: GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV FATIAAFALM MD

Arabidopsis Description

COBL10COBRA-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJU0]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.