Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 6
- extracellular 7
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97377 | Canola | endoplasmic reticulum, golgi, vacuole | 85.18 | 85.56 |
| Bra010411.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 84.28 | 84.92 |
| CDY29275 | Canola | extracellular, plasma membrane, vacuole | 84.43 | 84.81 |
| Bra026378.1-P | Field mustard | extracellular, golgi, vacuole | 82.78 | 84.69 |
| CDX89278 | Canola | extracellular, golgi, vacuole | 83.98 | 84.62 |
| CDY14283 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 85.78 | 83.89 |
| CDY09102 | Canola | cytosol | 26.8 | 68.58 |
| AT3G20580.1 | Thale cress | endoplasmic reticulum, vacuole | 67.96 | 67.56 |
| Bra020151.1-P | Field mustard | cytosol | 25.45 | 65.64 |
| VIT_10s0116g00620.t01 | Wine grape | extracellular | 55.84 | 57.03 |
| VIT_19s0177g00160.t01 | Wine grape | plasma membrane | 55.09 | 56.18 |
| PGSC0003DMT400002688 | Potato | cytosol | 10.63 | 55.04 |
| PGSC0003DMT400002678 | Potato | vacuole | 54.34 | 54.92 |
| GSMUA_Achr3P21560_001 | Banana | plasma membrane | 53.44 | 54.42 |
| KRH27088 | Soybean | mitochondrion | 54.49 | 54.25 |
| PGSC0003DMT400037398 | Potato | vacuole | 53.59 | 54.0 |
| KRH22248 | Soybean | golgi, vacuole | 53.74 | 53.9 |
| Solyc10g006450.2.1 | Tomato | golgi, plasma membrane, vacuole | 53.29 | 53.06 |
| GSMUA_Achr4P33540_001 | Banana | vacuole | 52.69 | 52.93 |
| Solyc07g064200.2.1 | Tomato | extracellular, golgi, vacuole | 48.65 | 52.85 |
| HORVU7Hr1G028350.1 | Barley | golgi, mitochondrion, plasma membrane | 52.69 | 52.38 |
| TraesCS7D01G136500.1 | Wheat | mitochondrion | 52.54 | 52.08 |
| KXG36369 | Sorghum | mitochondrion | 52.4 | 52.01 |
| TraesCS7A01G136600.1 | Wheat | mitochondrion | 52.25 | 51.78 |
| TraesCS7B01G037700.1 | Wheat | mitochondrion | 52.1 | 51.63 |
| Zm00001d021661_P001 | Maize | mitochondrion | 52.1 | 51.33 |
| Os06t0685100-00 | Rice | plasma membrane | 51.5 | 50.37 |
| AT4G16120.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 46.86 | 47.35 |
| AT3G16860.1 | Thale cress | plasma membrane | 45.21 | 46.25 |
| AT5G49270.1 | Thale cress | extracellular, plasma membrane, vacuole | 44.16 | 44.49 |
| AT5G15630.1 | Thale cress | extracellular, plasma membrane, vacuole | 18.11 | 28.07 |
| AT3G29810.1 | Thale cress | extracellular | 17.81 | 26.98 |
| AT5G60920.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 17.52 | 25.66 |
| AT1G09790.1 | Thale cress | plasma membrane | 16.92 | 24.89 |
| AT3G02210.1 | Thale cress | extracellular | 16.47 | 24.34 |
| AT5G60950.1 | Thale cress | endoplasmic reticulum | 6.74 | 22.06 |
Protein Annotations
| MapMan:21.1.2.2 | EntrezGene:828819 | UniProt:A0A178V4R6 | ProteinID:AEE85302.1 | EMBL:AK175703 | EMBL:AK176063 |
| ArrayExpress:AT4G27110 | EnsemblPlantsGene:AT4G27110 | RefSeq:AT4G27110 | TAIR:AT4G27110 | RefSeq:AT4G27110-TAIR-G | EnsemblPlants:AT4G27110.1 |
| TAIR:AT4G27110.1 | Unigene:At.51032 | ProteinID:CAB38841.1 | ProteinID:CAB79566.1 | Symbol:COBL11 | InterPro:COBRA_pln |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010215 |
| GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 | RefSeq:NP_567766.1 |
| ProteinID:OAP00395.1 | PFAM:PD140986 | PFAM:PF04833 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR31052 | PANTHER:PTHR31052:SF2 | UniProt:Q9T045 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0000162B2B | SEG:seg | : | : | : |
Description
COBL11COBRA-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9T045]
Coordinates
chr4:-:13599044..13601586
Molecular Weight (calculated)
73852.7 Da
IEP (calculated)
9.196
GRAVY (calculated)
-0.317
Length
668 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKLRYVHLN LLLLLLPLIN LQFPTLSLAQ DYDEPKKDDT PPPGLARCNG VYMSYSSGGR EKLYPRTTNA TAQAWSFKST AMIVNTGIEE VKGWQMFVGF
101: HHREIIVSAT GAVSSDGDFP VDATNGTTFI GSQNTDLKTS ILTAGDYTQI STNIEITGTV FGGKGTATPM PKSIKLTNDG WQCPAATSKG GTMQVCCKRN
201: PKFKAKEKVK TKFMPRQHGD LNIIYDVLQA YASSYMAQVT IDNTSPLGRL DHWNLTWEWM RGEFIHSMRG AYAAEKNTLE CLSSKAGQFY GDLDFSQVAN
301: CQKKPIIKDL PAERKDDNVT GKLPFCCKNG TLLPTHMDPS KSKAIFQLQV YKVPPDQNRT AFFPPRNWKI DGIVNPTYKC GPPIRVDATP FPDPSGLQAT
401: TYAIASWQVI CNITKPKPQA ARCCVSFSAF YNDSAIPCNT CACGCKDIDT DTCNANARQL LLPTDTLLVP FDNRTLKAKV WAKQKHMAYP KKLPCPDNCG
501: ISLNWHLNSD YGNGWSARVT LFNWGNNAVE DWFGALDLGK AGLGYENIYS FNGSRVPPKN QTIFFQGLPG MNYLIGITNG TNPARDPQIP GKMQSVISFK
601: KKNLGSLNII GGDGFPKRVF FNGEECELPK YFPKKSSGMR LSGIRFLPSI LLAITTFHAI TDRLLTGV
101: HHREIIVSAT GAVSSDGDFP VDATNGTTFI GSQNTDLKTS ILTAGDYTQI STNIEITGTV FGGKGTATPM PKSIKLTNDG WQCPAATSKG GTMQVCCKRN
201: PKFKAKEKVK TKFMPRQHGD LNIIYDVLQA YASSYMAQVT IDNTSPLGRL DHWNLTWEWM RGEFIHSMRG AYAAEKNTLE CLSSKAGQFY GDLDFSQVAN
301: CQKKPIIKDL PAERKDDNVT GKLPFCCKNG TLLPTHMDPS KSKAIFQLQV YKVPPDQNRT AFFPPRNWKI DGIVNPTYKC GPPIRVDATP FPDPSGLQAT
401: TYAIASWQVI CNITKPKPQA ARCCVSFSAF YNDSAIPCNT CACGCKDIDT DTCNANARQL LLPTDTLLVP FDNRTLKAKV WAKQKHMAYP KKLPCPDNCG
501: ISLNWHLNSD YGNGWSARVT LFNWGNNAVE DWFGALDLGK AGLGYENIYS FNGSRVPPKN QTIFFQGLPG MNYLIGITNG TNPARDPQIP GKMQSVISFK
601: KKNLGSLNII GGDGFPKRVF FNGEECELPK YFPKKSSGMR LSGIRFLPSI LLAITTFHAI TDRLLTGV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.