Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010411.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 96.99 | 97.29 |
| CDY14283 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 98.8 | 96.19 |
| CDY29275 | Canola | extracellular, plasma membrane, vacuole | 91.28 | 91.28 |
| CDX89278 | Canola | extracellular, golgi, vacuole | 90.98 | 91.25 |
| AT4G27110.1 | Thale cress | extracellular | 85.56 | 85.18 |
| CDY09102 | Canola | cytosol | 28.72 | 73.18 |
| CDY36030 | Canola | vacuole | 67.52 | 69.29 |
| CDX82237 | Canola | endoplasmic reticulum, vacuole | 68.42 | 68.11 |
| CDY19626 | Canola | mitochondrion | 41.05 | 66.26 |
| VIT_10s0116g00620.t01 | Wine grape | extracellular | 55.49 | 56.42 |
| VIT_19s0177g00160.t01 | Wine grape | plasma membrane | 55.19 | 56.03 |
| CDY57659 | Canola | cytosol | 12.78 | 55.56 |
| KRH22248 | Soybean | golgi, vacuole | 55.49 | 55.41 |
| KRH27088 | Soybean | mitochondrion | 55.64 | 55.14 |
| CDY55591 | Canola | plasma membrane | 68.42 | 54.69 |
| PGSC0003DMT400002678 | Potato | vacuole | 54.29 | 54.61 |
| Solyc07g064200.2.1 | Tomato | extracellular, golgi, vacuole | 49.92 | 53.98 |
| CDY43072 | Canola | plasma membrane | 68.12 | 53.61 |
| PGSC0003DMT400037398 | Potato | vacuole | 53.38 | 53.54 |
| GSMUA_Achr4P33540_001 | Banana | vacuole | 53.38 | 53.38 |
| GSMUA_Achr3P21560_001 | Banana | plasma membrane | 52.63 | 53.35 |
| Solyc10g006450.2.1 | Tomato | golgi, plasma membrane, vacuole | 53.23 | 52.76 |
| PGSC0003DMT400002688 | Potato | cytosol | 10.08 | 51.94 |
| KXG36369 | Sorghum | mitochondrion | 52.48 | 51.86 |
| HORVU7Hr1G028350.1 | Barley | golgi, mitochondrion, plasma membrane | 52.18 | 51.64 |
| Zm00001d021661_P001 | Maize | mitochondrion | 52.63 | 51.62 |
| TraesCS7D01G136500.1 | Wheat | mitochondrion | 51.88 | 51.19 |
| TraesCS7B01G037700.1 | Wheat | mitochondrion | 51.43 | 50.74 |
| TraesCS7A01G136600.1 | Wheat | mitochondrion | 51.43 | 50.74 |
| Os06t0685100-00 | Rice | plasma membrane | 51.88 | 50.51 |
| CDY34424 | Canola | plasma membrane | 46.02 | 46.43 |
| CDY32210 | Canola | plasma membrane | 46.02 | 46.36 |
| CDY00037 | Canola | plasma membrane | 44.81 | 45.02 |
| CDY49611 | Canola | plasma membrane | 44.81 | 45.02 |
| CDY52722 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 43.76 | 43.76 |
| CDY34980 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 42.86 | 42.73 |
| CDY66895 | Canola | cytosol | 2.56 | 29.82 |
| CDX90983 | Canola | extracellular | 18.2 | 27.82 |
| CDY70289 | Canola | extracellular | 16.39 | 27.46 |
| CDX85277 | Canola | extracellular | 17.89 | 27.29 |
| CDX86358 | Canola | extracellular | 17.59 | 26.83 |
| CDX85543 | Canola | extracellular, plasma membrane, vacuole | 18.35 | 26.75 |
| CDX69511 | Canola | plasma membrane | 18.2 | 26.59 |
| CDY26444 | Canola | plastid | 14.59 | 26.5 |
| CDY31063 | Canola | plasma membrane | 17.29 | 26.5 |
| CDX87193 | Canola | plasma membrane | 17.74 | 25.88 |
| CDY02184 | Canola | plasma membrane | 17.59 | 25.6 |
| CDY16831 | Canola | plasma membrane | 17.59 | 25.55 |
| CDX93481 | Canola | plasma membrane | 16.69 | 25.28 |
| CDY58691 | Canola | plasma membrane | 17.29 | 25.11 |
| CDY60470 | Canola | plasma membrane | 16.54 | 24.02 |
| CDY20671 | Canola | extracellular, plasma membrane, vacuole | 16.39 | 23.96 |
| CDY43250 | Canola | plasma membrane | 16.39 | 23.85 |
| CDY58695 | Canola | extracellular | 7.22 | 23.3 |
| CDY42842 | Canola | cytosol | 4.21 | 22.95 |
| CDY02181 | Canola | endoplasmic reticulum, extracellular | 7.07 | 22.82 |
| CDY26445 | Canola | cytosol | 5.26 | 20.71 |
| CDY24004 | Canola | cytosol, nucleus, plastid | 2.56 | 20.0 |
| CDX94950 | Canola | nucleus | 16.54 | 19.3 |
| CDY29033 | Canola | cytosol | 5.11 | 18.68 |
| CDX87194 | Canola | mitochondrion | 5.56 | 17.7 |
| CDY14723 | Canola | cytosol | 7.82 | 16.35 |
| CDX70627 | Canola | cytosol, nucleus, plasma membrane | 18.8 | 14.57 |
Protein Annotations
| MapMan:21.1.2.2 | GO:A0A078E8K1 | EnsemblPlants:CDX97377 | ProteinID:CDX97377 | ProteinID:CDX97377.1 | InterPro:COBRA_pln |
| GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010215 | GO:GO:0016020 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 | EnsemblPlantsGene:GSBRNA2T00104480001 | PFAM:PD140986 | PFAM:PF04833 |
| PANTHER:PTHR31052 | PANTHER:PTHR31052:SF2 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EEDAFD | SEG:seg |
Description
BnaC08g12420D
Coordinates
chrLK031899:-:178885..181208
Molecular Weight (calculated)
74072.9 Da
IEP (calculated)
9.137
GRAVY (calculated)
-0.343
Length
665 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIRYVHLNL LLLLLPIINL LLFPTPSLAQ DYGEDAEKKD TPPPGLARCN GVYMSYISGG REKLYPRTKN VTAQAWSFKA TAMIVNTGTE EVKGWEMFVG
101: YRHREIIVSA TGAVSSDGDF PYDASNGTTF IGSPNTDLKT SIETAGDYTQ ISTNIEITGT LFGGRGTATP LPRTIKLVND GWECPAANSK GGTMQVCCKR
201: NPKFKPKEKK KTKFMRRRHG DLNIIYDVLQ AYTSNYMAQV TIDNDSPLGR LDHWNLTWEW MRGEFIHSLR GAYSAEKNPS ECLHSKAGQF YGDLDFSQVA
301: TCQKKPIIKD LPAERKDDKL LGKLPFCCKN GTLLPAHMDS SKSRAIFQLQ VYKVPPDQNR TAFFPPQHWK IDGIVNPQYK CGTPIRVDAT GFPDPSGLQA
401: TTYAIASWQV VCNITKPKPK SARCCVSYSA FYNDSAIPCN TCACGCGDID TDTCNANARP LLLPPDSLLV PFENRTLKAK VWARRKHMAV PKKLPCPDNC
501: GISLNWHVNS DYADGWSARV TLFNWGANAV EDWFAAVDLG KTGLGYENVY SFNGTRVPPK NQTIFFQGVR GMNFLIGLTN GSNPARDPQV PGKMQSVISF
601: KKHLGSLNIP RGDGFPKRVF FNGEECELPK YFPKKSHGER LSCIRFLPSI LLVITTFLVI INDRF
101: YRHREIIVSA TGAVSSDGDF PYDASNGTTF IGSPNTDLKT SIETAGDYTQ ISTNIEITGT LFGGRGTATP LPRTIKLVND GWECPAANSK GGTMQVCCKR
201: NPKFKPKEKK KTKFMRRRHG DLNIIYDVLQ AYTSNYMAQV TIDNDSPLGR LDHWNLTWEW MRGEFIHSLR GAYSAEKNPS ECLHSKAGQF YGDLDFSQVA
301: TCQKKPIIKD LPAERKDDKL LGKLPFCCKN GTLLPAHMDS SKSRAIFQLQ VYKVPPDQNR TAFFPPQHWK IDGIVNPQYK CGTPIRVDAT GFPDPSGLQA
401: TTYAIASWQV VCNITKPKPK SARCCVSYSA FYNDSAIPCN TCACGCGDID TDTCNANARP LLLPPDSLLV PFENRTLKAK VWARRKHMAV PKKLPCPDNC
501: GISLNWHVNS DYADGWSARV TLFNWGANAV EDWFAAVDLG KTGLGYENVY SFNGTRVPPK NQTIFFQGVR GMNFLIGLTN GSNPARDPQV PGKMQSVISF
601: KKHLGSLNIP RGDGFPKRVF FNGEECELPK YFPKKSHGER LSCIRFLPSI LLVITTFLVI INDRF
001: MKKLRYVHLN LLLLLLPLIN LQFPTLSLAQ DYDEPKKDDT PPPGLARCNG VYMSYSSGGR EKLYPRTTNA TAQAWSFKST AMIVNTGIEE VKGWQMFVGF
101: HHREIIVSAT GAVSSDGDFP VDATNGTTFI GSQNTDLKTS ILTAGDYTQI STNIEITGTV FGGKGTATPM PKSIKLTNDG WQCPAATSKG GTMQVCCKRN
201: PKFKAKEKVK TKFMPRQHGD LNIIYDVLQA YASSYMAQVT IDNTSPLGRL DHWNLTWEWM RGEFIHSMRG AYAAEKNTLE CLSSKAGQFY GDLDFSQVAN
301: CQKKPIIKDL PAERKDDNVT GKLPFCCKNG TLLPTHMDPS KSKAIFQLQV YKVPPDQNRT AFFPPRNWKI DGIVNPTYKC GPPIRVDATP FPDPSGLQAT
401: TYAIASWQVI CNITKPKPQA ARCCVSFSAF YNDSAIPCNT CACGCKDIDT DTCNANARQL LLPTDTLLVP FDNRTLKAKV WAKQKHMAYP KKLPCPDNCG
501: ISLNWHLNSD YGNGWSARVT LFNWGNNAVE DWFGALDLGK AGLGYENIYS FNGSRVPPKN QTIFFQGLPG MNYLIGITNG TNPARDPQIP GKMQSVISFK
601: KKNLGSLNII GGDGFPKRVF FNGEECELPK YFPKKSSGMR LSGIRFLPSI LLAITTFHAI TDRLLTGV
101: HHREIIVSAT GAVSSDGDFP VDATNGTTFI GSQNTDLKTS ILTAGDYTQI STNIEITGTV FGGKGTATPM PKSIKLTNDG WQCPAATSKG GTMQVCCKRN
201: PKFKAKEKVK TKFMPRQHGD LNIIYDVLQA YASSYMAQVT IDNTSPLGRL DHWNLTWEWM RGEFIHSMRG AYAAEKNTLE CLSSKAGQFY GDLDFSQVAN
301: CQKKPIIKDL PAERKDDNVT GKLPFCCKNG TLLPTHMDPS KSKAIFQLQV YKVPPDQNRT AFFPPRNWKI DGIVNPTYKC GPPIRVDATP FPDPSGLQAT
401: TYAIASWQVI CNITKPKPQA ARCCVSFSAF YNDSAIPCNT CACGCKDIDT DTCNANARQL LLPTDTLLVP FDNRTLKAKV WAKQKHMAYP KKLPCPDNCG
501: ISLNWHLNSD YGNGWSARVT LFNWGNNAVE DWFGALDLGK AGLGYENIYS FNGSRVPPKN QTIFFQGLPG MNYLIGITNG TNPARDPQIP GKMQSVISFK
601: KKNLGSLNII GGDGFPKRVF FNGEECELPK YFPKKSSGMR LSGIRFLPSI LLAITTFHAI TDRLLTGV
Arabidopsis Description
COBL11COBRA-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9T045]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.