Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- endoplasmic reticulum 3
- extracellular 2
- vacuole 2
- plasma membrane 4
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023941.1-P | Field mustard | plasma membrane | 78.73 | 97.47 |
| CDY43072 | Canola | plasma membrane | 95.19 | 93.73 |
| CDY36030 | Canola | vacuole | 72.0 | 92.44 |
| CDX82237 | Canola | endoplasmic reticulum, vacuole | 73.08 | 91.02 |
| AT3G20580.1 | Thale cress | endoplasmic reticulum, vacuole | 70.19 | 86.9 |
| CDY19626 | Canola | mitochondrion | 42.19 | 85.19 |
| CDY57659 | Canola | cytosol | 13.94 | 75.82 |
| CDX97377 | Canola | endoplasmic reticulum, golgi, vacuole | 54.69 | 68.42 |
| CDY29275 | Canola | extracellular, plasma membrane, vacuole | 54.33 | 67.97 |
| CDX89278 | Canola | extracellular, golgi, vacuole | 54.09 | 67.87 |
| CDY14283 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 55.17 | 67.2 |
| CDY09102 | Canola | cytosol | 19.11 | 60.92 |
| VIT_10s0116g00620.t01 | Wine grape | extracellular | 47.0 | 59.79 |
| VIT_19s0177g00160.t01 | Wine grape | plasma membrane | 46.63 | 59.24 |
| PGSC0003DMT400002678 | Potato | vacuole | 46.39 | 58.4 |
| Solyc07g064200.2.1 | Tomato | extracellular, golgi, vacuole | 42.67 | 57.72 |
| KRH22248 | Soybean | golgi, vacuole | 45.31 | 56.61 |
| GSMUA_Achr3P21560_001 | Banana | plasma membrane | 44.23 | 56.1 |
| KRH27088 | Soybean | mitochondrion | 45.19 | 56.04 |
| GSMUA_Achr4P33540_001 | Banana | vacuole | 44.47 | 55.64 |
| Solyc10g006450.2.1 | Tomato | golgi, plasma membrane, vacuole | 44.71 | 55.44 |
| PGSC0003DMT400037398 | Potato | vacuole | 44.11 | 55.35 |
| KXG36369 | Sorghum | mitochondrion | 43.75 | 54.09 |
| Zm00001d021661_P001 | Maize | mitochondrion | 43.39 | 53.24 |
| HORVU7Hr1G028350.1 | Barley | golgi, mitochondrion, plasma membrane | 42.55 | 52.68 |
| TraesCS7D01G136500.1 | Wheat | mitochondrion | 42.67 | 52.67 |
| TraesCS7A01G136600.1 | Wheat | mitochondrion | 42.67 | 52.67 |
| TraesCS7B01G037700.1 | Wheat | mitochondrion | 42.31 | 52.23 |
| PGSC0003DMT400002688 | Potato | cytosol | 8.05 | 51.94 |
| Os06t0685100-00 | Rice | plasma membrane | 42.55 | 51.83 |
| CDY34424 | Canola | plasma membrane | 39.18 | 49.47 |
| CDY32210 | Canola | plasma membrane | 38.94 | 49.09 |
| CDY49611 | Canola | plasma membrane | 37.5 | 47.13 |
| CDY00037 | Canola | plasma membrane | 37.38 | 46.98 |
| CDY52722 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 36.78 | 46.02 |
| CDY34980 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 36.66 | 45.73 |
| CDY66895 | Canola | cytosol | 2.04 | 29.82 |
| CDX90983 | Canola | extracellular | 15.38 | 29.43 |
| CDX85543 | Canola | extracellular, plasma membrane, vacuole | 15.62 | 28.51 |
| CDY26444 | Canola | plastid | 12.26 | 27.87 |
| CDX69511 | Canola | plasma membrane | 15.02 | 27.47 |
| CDX93481 | Canola | plasma membrane | 14.3 | 27.11 |
| CDY70289 | Canola | extracellular | 12.86 | 26.95 |
| CDX85277 | Canola | extracellular | 14.06 | 26.83 |
| CDY43250 | Canola | plasma membrane | 14.66 | 26.7 |
| CDX87193 | Canola | plasma membrane | 14.54 | 26.54 |
| CDY31063 | Canola | plasma membrane | 13.82 | 26.5 |
| CDY60470 | Canola | plasma membrane | 14.54 | 26.42 |
| CDX86358 | Canola | extracellular | 13.82 | 26.38 |
| CDY02184 | Canola | plasma membrane | 14.42 | 26.26 |
| CDY16831 | Canola | plasma membrane | 14.42 | 26.2 |
| CDY58691 | Canola | plasma membrane | 14.3 | 25.98 |
| CDY58695 | Canola | extracellular | 6.37 | 25.73 |
| CDY20671 | Canola | extracellular, plasma membrane, vacuole | 13.94 | 25.49 |
| CDY02181 | Canola | endoplasmic reticulum, extracellular | 6.25 | 25.24 |
| CDY24004 | Canola | cytosol, nucleus, plastid | 2.28 | 22.35 |
| CDY42842 | Canola | cytosol | 3.12 | 21.31 |
| CDY26445 | Canola | cytosol | 4.33 | 21.3 |
| CDX94950 | Canola | nucleus | 13.58 | 19.82 |
| CDY29033 | Canola | cytosol | 4.33 | 19.78 |
| CDX87194 | Canola | mitochondrion | 4.45 | 17.7 |
| CDY14723 | Canola | cytosol | 6.37 | 16.67 |
| CDX70627 | Canola | cytosol, nucleus, plasma membrane | 15.38 | 14.92 |
Protein Annotations
| Gene3D:2.60.40.420 | MapMan:21.1.2.2 | GO:A0A078IYT4 | UniProt:A0A078IYT4 | EnsemblPlants:CDY55591 | ProteinID:CDY55591 |
| ProteinID:CDY55591.1 | InterPro:COBRA_pln | InterPro:Cupredoxin | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0010215 |
| GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0022900 | GO:GO:0031225 | GO:GO:0040007 |
| EnsemblPlantsGene:GSBRNA2T00017053001 | InterPro:IPR003245 | InterPro:IPR008972 | PFAM:PD003122 | PFAM:PD140986 | PFAM:PF02298 |
| PFAM:PF04833 | PFscan:PS51485 | PANTHER:PTHR31052 | PANTHER:PTHR31052:SF2 | InterPro:Phytocyanin_dom | SUPFAM:SSF49503 |
| SignalP:SignalP-noTM | UniParc:UPI0004EE9D61 | SEG:seg | : | : | : |
Description
BnaA01g36400DBnaA01g36400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IYT4]
Coordinates
chrLK033414:+:33391..38050
Molecular Weight (calculated)
91779.1 Da
IEP (calculated)
8.815
GRAVY (calculated)
-0.407
Length
832 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVVEVKTGM KIPWKARYSL TLLILLSSVL LLCNGQDYGT PTEDGAGGGE PPPEMARCNG IFMSYSFGSR EREYPHVKNV TAQSWAFKSS AMIVNAGKEE
101: LTGWQMFIGF RHKELIVSAT GASPLDGDYP LDASNGTTFV GSPNTDLKTS ILTAGDFTQI STNIEITGTL FGVAKGVTPM PRTLKLINDG WECPAAKRKG
201: GSMNVCCKRN PKFKVKTGPK TKFAPRRHGD LNIVYDVLQS FGSNYLAQVT IDNENPLGRL DRWNLTWEWT RGEIINTMRG AYTYKRDPSE CLYSRAGQYY
301: KDLDFSQVMN CQKKPAISDL PPERKDDNVT GKLPFCCKNG TLLPPLMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDSSGLPAV TYAIASWQVV CNITKPKAQA SRCCVSFSAF YNSSAIPCNT CACGCNDIDT TTCNADRNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPIP
501: KKLPCPDNCG VSINWHVNTD YRDGWTARLT VFNWRDFAFE DWFVAVEMGK AGPGYENVYS FNGTRVPPNN RTVMFQGLRD MNYLVGQVNG THPLRDPPVP
601: GKQQSVISFK KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGYR HVWYLSYARE FMVGGAKGWT VPSGSQVYSQ WAEQSRFQVG DSLLFVYQPN
701: QDSVFQVTRD AYDSCNTDAP TAKFADGKTS FALTHSGPYY FISGNKDNCN KNEKLVVIVM ADRNGKTTSS SSPPSQAPAP SGEAAPSPPI TSNLEPPATT
801: PTRETPNNAA SSFSSFVSAL LGAALASTLF LH
101: LTGWQMFIGF RHKELIVSAT GASPLDGDYP LDASNGTTFV GSPNTDLKTS ILTAGDFTQI STNIEITGTL FGVAKGVTPM PRTLKLINDG WECPAAKRKG
201: GSMNVCCKRN PKFKVKTGPK TKFAPRRHGD LNIVYDVLQS FGSNYLAQVT IDNENPLGRL DRWNLTWEWT RGEIINTMRG AYTYKRDPSE CLYSRAGQYY
301: KDLDFSQVMN CQKKPAISDL PPERKDDNVT GKLPFCCKNG TLLPPLMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDSSGLPAV TYAIASWQVV CNITKPKAQA SRCCVSFSAF YNSSAIPCNT CACGCNDIDT TTCNADRNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPIP
501: KKLPCPDNCG VSINWHVNTD YRDGWTARLT VFNWRDFAFE DWFVAVEMGK AGPGYENVYS FNGTRVPPNN RTVMFQGLRD MNYLVGQVNG THPLRDPPVP
601: GKQQSVISFK KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGYR HVWYLSYARE FMVGGAKGWT VPSGSQVYSQ WAEQSRFQVG DSLLFVYQPN
701: QDSVFQVTRD AYDSCNTDAP TAKFADGKTS FALTHSGPYY FISGNKDNCN KNEKLVVIVM ADRNGKTTSS SSPPSQAPAP SGEAAPSPPI TSNLEPPATT
801: PTRETPNNAA SSFSSFVSAL LGAALASTLF LH
001: MRAIDVKTGM KIPWDVRYSL SLFIFLSSIL FLSNGQDYGM PGEDGGGGAE PPPEMAHCNG IFMSYNFGSR EREYPHVKNV TAQSWAFKST AMIVNAGREE
101: LKGWQMFIGF RHKELIVSAT GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM PRTIKLTNDG WECPAAKRKG
201: GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY
301: KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDPSGLLAV TYAISSWQVV CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPVP
501: KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP
601: GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV FATIAAFALM MD
101: LKGWQMFIGF RHKELIVSAT GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM PRTIKLTNDG WECPAAKRKG
201: GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY
301: KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDPSGLLAV TYAISSWQVV CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPVP
501: KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP
601: GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV FATIAAFALM MD
Arabidopsis Description
COBL10COBRA-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJU0]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.