Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 7
- endoplasmic reticulum 5
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030800.1-P | Field mustard | cytosol | 92.63 | 96.4 |
| CDY20671 | Canola | extracellular, plasma membrane, vacuole | 93.32 | 89.01 |
| CDX93481 | Canola | plasma membrane | 80.65 | 79.73 |
| AT1G09790.1 | Thale cress | plasma membrane | 76.96 | 73.57 |
| CDX94950 | Canola | nucleus | 74.42 | 56.67 |
| Solyc01g103860.2.1 | Tomato | cytosol | 54.61 | 56.03 |
| VIT_12s0035g00630.t01 | Wine grape | extracellular, plasma membrane | 53.92 | 54.29 |
| CDY42842 | Canola | cytosol | 14.98 | 53.28 |
| GSMUA_Achr4P27070_001 | Banana | cytosol | 50.46 | 52.9 |
| CDY70289 | Canola | extracellular | 46.54 | 50.88 |
| CDX85277 | Canola | extracellular | 50.92 | 50.69 |
| CDX86358 | Canola | extracellular | 50.92 | 50.69 |
| KXG26803 | Sorghum | extracellular, plasma membrane | 50.69 | 49.22 |
| CDY66895 | Canola | cytosol | 6.45 | 49.12 |
| TraesCS2A01G388600.1 | Wheat | extracellular, plasma membrane | 41.24 | 47.99 |
| Zm00001d002803_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 48.16 | 47.94 |
| CDY43250 | Canola | plasma membrane | 49.77 | 47.26 |
| TraesCS6A01G158000.1 | Wheat | endoplasmic reticulum | 37.79 | 47.13 |
| CDX90983 | Canola | extracellular | 47.23 | 47.13 |
| TraesCS2D01G386400.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 47.93 | 47.06 |
| CDY60470 | Canola | plasma membrane | 49.54 | 46.94 |
| CDY16831 | Canola | plasma membrane | 49.08 | 46.51 |
| CDX87193 | Canola | plasma membrane | 48.85 | 46.49 |
| Os04t0540300-00 | Rice | plasma membrane | 47.0 | 46.47 |
| CDY02184 | Canola | plasma membrane | 48.62 | 46.17 |
| CDY24004 | Canola | cytosol, nucleus, plastid | 8.99 | 45.88 |
| CDY58691 | Canola | plasma membrane | 48.39 | 45.85 |
| CDY26445 | Canola | cytosol | 17.74 | 45.56 |
| CDX69511 | Canola | plasma membrane | 47.7 | 45.49 |
| TraesCS6A01G330900.1 | Wheat | extracellular, plasma membrane | 43.55 | 45.43 |
| CDY26444 | Canola | plastid | 38.25 | 45.36 |
| TraesCS6B01G185800.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 43.32 | 45.3 |
| TraesCS6B01G361700.1 | Wheat | plastid | 23.04 | 45.25 |
| CDX85543 | Canola | extracellular, plasma membrane, vacuole | 47.0 | 44.74 |
| TraesCS2B01G406700.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 38.48 | 38.93 |
| CDY02181 | Canola | endoplasmic reticulum, extracellular | 17.28 | 36.41 |
| CDY58695 | Canola | extracellular | 17.28 | 36.41 |
| CDY29033 | Canola | cytosol | 14.75 | 35.16 |
| HORVU2Hr1G092510.1 | Barley | mitochondrion | 19.35 | 26.25 |
| CDY14723 | Canola | cytosol | 18.89 | 25.79 |
| CDX70627 | Canola | cytosol, nucleus, plasma membrane | 48.16 | 24.36 |
| CDY57659 | Canola | cytosol | 7.6 | 21.57 |
| CDY09102 | Canola | cytosol | 12.67 | 21.07 |
| CDY19626 | Canola | mitochondrion | 19.35 | 20.39 |
| CDX87194 | Canola | mitochondrion | 9.45 | 19.62 |
| CDY32210 | Canola | plasma membrane | 27.19 | 17.88 |
| CDY00037 | Canola | plasma membrane | 26.96 | 17.67 |
| CDY49611 | Canola | plasma membrane | 26.96 | 17.67 |
| CDY34424 | Canola | plasma membrane | 26.73 | 17.6 |
| CDY52722 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 26.5 | 17.29 |
| CDY29275 | Canola | extracellular, plasma membrane, vacuole | 26.5 | 17.29 |
| CDX97377 | Canola | endoplasmic reticulum, golgi, vacuole | 26.5 | 17.29 |
| CDY36030 | Canola | vacuole | 25.81 | 17.28 |
| CDX89278 | Canola | extracellular, golgi, vacuole | 26.04 | 17.04 |
| CDY34980 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 26.04 | 16.94 |
| CDX82237 | Canola | endoplasmic reticulum, vacuole | 25.81 | 16.77 |
| CDY14283 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 26.27 | 16.69 |
| CDY55591 | Canola | plasma membrane | 26.5 | 13.82 |
| CDY43072 | Canola | plasma membrane | 26.27 | 13.49 |
Protein Annotations
| MapMan:21.1.2.2 | GO:A0A078H2J7 | UniProt:A0A078H2J7 | EnsemblPlants:CDY31063 | ProteinID:CDY31063 | ProteinID:CDY31063.1 |
| InterPro:COBRA_pln | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010215 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 | EnsemblPlantsGene:GSBRNA2T00047138001 | PFAM:PD140986 |
| PFAM:PF04833 | PIRSF:PIRSF038122 | PANTHER:PTHR31673 | PANTHER:PTHR31673:SF12 | SignalP:SignalP-noTM | UniParc:UPI0004EEE803 |
| SEG:seg | : | : | : | : | : |
Description
BnaA08g26130DBnaA08g26130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H2J7]
Coordinates
chrLK032267:+:109892..112600
Molecular Weight (calculated)
48911.6 Da
IEP (calculated)
7.142
GRAVY (calculated)
-0.209
Length
434 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKLLFAVTT ILFTIAPSTH GFDPLDPYGE MIIKWDLLQS SPGHHTVLVK IENKQEYRHV EKPGWKLSWH WVNKTVIWDM RGAETTEQGN CSAFAASETL
101: PHCCLRRPTI VDLLPGAPFN MQVSNCCRGG VLTSMSQDRI NYVSAFHMTI GSFPDDDPGE FTMPYDFDIG VPGYTCGNAT SVDPTKYSTD KGRRKTQALA
201: TWEAECVYSQ TKSSQSPKCC VSLSAFYYQN IVPCPTCSCG CSSSNCVKPG EMPPILEQKH DPHVEVSPLV QCTKHMCPIH IHWHVKVNYK KYWRVKITAT
301: NLNTMKNYSD WNLVVLHPNL NNVTQVFSFN YKPMTPLHKS INDTGMFWGL KFYNDVLLQA GEFGNVQTEI LLEKDMGSFT FKDGWGFPRR ILFNGDECVM
401: PSPDDYPRLP NSASSSSGVS SIVTFLLCFF LLLV
101: PHCCLRRPTI VDLLPGAPFN MQVSNCCRGG VLTSMSQDRI NYVSAFHMTI GSFPDDDPGE FTMPYDFDIG VPGYTCGNAT SVDPTKYSTD KGRRKTQALA
201: TWEAECVYSQ TKSSQSPKCC VSLSAFYYQN IVPCPTCSCG CSSSNCVKPG EMPPILEQKH DPHVEVSPLV QCTKHMCPIH IHWHVKVNYK KYWRVKITAT
301: NLNTMKNYSD WNLVVLHPNL NNVTQVFSFN YKPMTPLHKS INDTGMFWGL KFYNDVLLQA GEFGNVQTEI LLEKDMGSFT FKDGWGFPRR ILFNGDECVM
401: PSPDDYPRLP NSASSSSGVS SIVTFLLCFF LLLV
001: MGAMLNLLLV VTVILCSILS PTHGYDPLDP FGKIIIKWDL LLSSPGQHHV QVTLENMQEY RHVEKPGWKL SWHWLNQEVI WDMKGAETTE QGNCSAFASS
101: GNLPHCCLER PTIVDLLPGA SLNVQVANCC RGGVLTSMSQ DHANHVSAFH MTVGSSPDGP EEFNMPSNFD IGVPGYSCDN ATSVSPTKFS TDKGRRKTQA
201: LATWEAVCVY SQFRSSPSPK CCVSLSAFYY QNIVPCPTCS CGCSSSHCVK DGELPPYLEQ KHDPDEEVSP VVKCSDHMCP IRIHWHVKVN YREYWRVKIT
301: ATNFNTMKNY TNWNLVVLHP NLKSVQQVFS FNYKSLTPYQ NSINDTGMFW GVQFYNDVLL QEGKIGNVQT ELLLKKDMGN FTFREGWAFP RRILFNGDEC
401: VMPSPDDFPR LPKSAHSSSS SSAVISSVSV VFCFLLHHLL LLV
101: GNLPHCCLER PTIVDLLPGA SLNVQVANCC RGGVLTSMSQ DHANHVSAFH MTVGSSPDGP EEFNMPSNFD IGVPGYSCDN ATSVSPTKFS TDKGRRKTQA
201: LATWEAVCVY SQFRSSPSPK CCVSLSAFYY QNIVPCPTCS CGCSSSHCVK DGELPPYLEQ KHDPDEEVSP VVKCSDHMCP IRIHWHVKVN YREYWRVKIT
301: ATNFNTMKNY TNWNLVVLHP NLKSVQQVFS FNYKSLTPYQ NSINDTGMFW GVQFYNDVLL QEGKIGNVQT ELLLKKDMGN FTFREGWAFP RRILFNGDEC
401: VMPSPDDFPR LPKSAHSSSS SSAVISSVSV VFCFLLHHLL LLV
Arabidopsis Description
COBL6COBRA-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O04500]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.