Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021208.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 99.4 | 99.4 |
| CDY52722 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 91.9 | 92.18 |
| AT3G16860.1 | Thale cress | plasma membrane | 73.76 | 75.34 |
| CDY32210 | Canola | plasma membrane | 68.07 | 68.79 |
| CDY34424 | Canola | plasma membrane | 67.77 | 68.59 |
| PGSC0003DMT400065836 | Potato | cytosol | 43.18 | 61.41 |
| KRH50776 | Soybean | endoplasmic reticulum, vacuole | 58.77 | 60.96 |
| KRH02312 | Soybean | endoplasmic reticulum, extracellular | 58.77 | 60.87 |
| VIT_05s0077g01470.t01 | Wine grape | plasma membrane | 58.02 | 59.45 |
| CDY49611 | Canola | plasma membrane | 57.72 | 58.16 |
| CDY00037 | Canola | plasma membrane | 57.72 | 58.16 |
| PGSC0003DMT400065840 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 56.67 | 58.06 |
| Solyc01g065530.2.1 | Tomato | nucleus, plastid | 56.37 | 58.02 |
| VIT_07s0005g01020.t01 | Wine grape | plasma membrane | 54.72 | 56.41 |
| KRH37033 | Soybean | extracellular | 54.27 | 55.69 |
| Solyc09g075540.1.1 | Tomato | plasma membrane | 53.07 | 54.29 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 49.33 | 49.33 |
| EER95000 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 48.88 | 48.66 |
| Zm00001d028826_P001 | Maize | plasma membrane | 48.58 | 48.58 |
| TraesCS4B01G187300.1 | Wheat | golgi | 48.58 | 48.58 |
| GSMUA_Achr11P... | Banana | plasma membrane | 49.03 | 48.37 |
| TraesCS4D01G188600.1 | Wheat | golgi | 48.43 | 47.99 |
| TraesCS4A01G117100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 48.43 | 47.99 |
| Os03t0301200-01 | Rice | extracellular, plasma membrane, vacuole | 48.28 | 47.99 |
| Zm00001d007208_P001 | Maize | extracellular, plasma membrane, vacuole | 46.03 | 46.94 |
| CDY36030 | Canola | vacuole | 45.58 | 46.91 |
| CDY19626 | Canola | mitochondrion | 28.79 | 46.6 |
| OQU90545 | Sorghum | extracellular, plasma membrane, vacuole | 46.18 | 46.6 |
| CDX82237 | Canola | endoplasmic reticulum, vacuole | 46.33 | 46.26 |
| CDY09102 | Canola | cytosol | 17.69 | 45.21 |
| GSMUA_Achr8P10390_001 | Banana | cytosol | 16.94 | 45.2 |
| TraesCS2B01G107700.1 | Wheat | plasma membrane | 44.23 | 44.76 |
| TraesCS2D01G092100.1 | Wheat | plasma membrane | 43.93 | 44.39 |
| Os07t0690900-01 | Rice | plasma membrane | 44.68 | 44.15 |
| HORVU0Hr1G030030.1 | Barley | extracellular, plasma membrane | 43.63 | 44.02 |
| CDY57659 | Canola | cytosol | 10.04 | 43.79 |
| CDY29275 | Canola | extracellular, plasma membrane, vacuole | 42.73 | 42.86 |
| CDX97377 | Canola | endoplasmic reticulum, golgi, vacuole | 42.73 | 42.86 |
| CDX89278 | Canola | extracellular, golgi, vacuole | 42.13 | 42.38 |
| HORVU2Hr1G015440.1 | Barley | cytosol | 34.93 | 42.29 |
| CDY14283 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 43.03 | 42.02 |
| TraesCS2A01G092900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 43.48 | 41.91 |
| HORVU4Hr1G054770.1 | Barley | plastid | 47.83 | 40.38 |
| CDY55591 | Canola | plasma membrane | 45.73 | 36.66 |
| CDY43072 | Canola | plasma membrane | 45.73 | 36.09 |
| CDX90983 | Canola | extracellular | 18.89 | 28.97 |
| CDX85543 | Canola | extracellular, plasma membrane, vacuole | 19.19 | 28.07 |
| CDX85277 | Canola | extracellular | 17.99 | 27.52 |
| CDY70289 | Canola | extracellular | 16.34 | 27.46 |
| CDX69511 | Canola | plasma membrane | 18.59 | 27.25 |
| CDX86358 | Canola | extracellular | 17.69 | 27.06 |
| CDX93481 | Canola | plasma membrane | 17.69 | 26.88 |
| CDY60470 | Canola | plasma membrane | 18.29 | 26.64 |
| CDY43250 | Canola | plasma membrane | 18.14 | 26.48 |
| CDY26444 | Canola | plastid | 14.39 | 26.23 |
| CDY31063 | Canola | plasma membrane | 16.94 | 26.04 |
| CDY02184 | Canola | plasma membrane | 17.69 | 25.82 |
| CDY16831 | Canola | plasma membrane | 17.54 | 25.55 |
| CDY20671 | Canola | extracellular, plasma membrane, vacuole | 17.39 | 25.49 |
| CDY58691 | Canola | plasma membrane | 17.39 | 25.33 |
| CDX87193 | Canola | plasma membrane | 17.09 | 25.0 |
| CDY66895 | Canola | cytosol | 2.1 | 24.56 |
| CDY42842 | Canola | cytosol | 4.2 | 22.95 |
| CDY02181 | Canola | endoplasmic reticulum, extracellular | 6.9 | 22.33 |
| CDY29033 | Canola | cytosol | 6.0 | 21.98 |
| CDY58695 | Canola | extracellular | 6.75 | 21.84 |
| CDY24004 | Canola | cytosol, nucleus, plastid | 2.7 | 21.18 |
| CDY26445 | Canola | cytosol | 5.1 | 20.12 |
| CDX94950 | Canola | nucleus | 16.49 | 19.3 |
| CDX87194 | Canola | mitochondrion | 6.0 | 19.14 |
| CDY14723 | Canola | cytosol | 8.1 | 16.98 |
| CDX70627 | Canola | cytosol, nucleus, plasma membrane | 18.89 | 14.69 |
Protein Annotations
| MapMan:21.1.2.2 | GO:A0A078H943 | UniProt:A0A078H943 | EnsemblPlants:CDY34980 | ProteinID:CDY34980 | ProteinID:CDY34980.1 |
| InterPro:COBRA_pln | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010215 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 | EnsemblPlantsGene:GSBRNA2T00057566001 | PFAM:PD140986 |
| PFAM:PF04833 | PANTHER:PTHR31052 | PANTHER:PTHR31052:SF3 | SignalP:SignalP-noTM | UniParc:UPI0004EE0DFB | SEG:seg |
Description
BnaA01g27540DBnaA01g27540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H943]
Coordinates
chrLK032344:-:164214..166636
Molecular Weight (calculated)
72748.2 Da
IEP (calculated)
8.000
GRAVY (calculated)
-0.165
Length
667 amino acids
Sequence
(BLAST)
(BLAST)
001: MILMGLVPKL ILLLSLFTTI QLTSSQPRQR SNDSTPPPPP TPPSPPPISP DAVLCNGIFV SYTYSTGTQI KPNDTKSQPY RFESVITVLN NGRDELKSWL
101: VFVGFAHKEI LVSASNAILE DGSSLPVSVE NGTTFAGYPA ADLKSAIMTA GDIKQMEARV ELVGTQFGVA PPGIPLPNNI TLVNDGWSCP KATKRDGNIL
201: EVCCMPDPKN ETDPIGEKLK PRQKGDLTIM YDIIRPYATS YWAQVTIENH NPLGRLDNWD LSFEWTKDEF ISQTKGAYPS VVDASACIDG PQGKHYDAVD
301: FSTVLSCARK PHIIDLPLTK YNDSNLGLKP YCCRNGTILS PSMDPTKSKS VFQMEVYKMP PNLNISAIAP PLSWKIKGNL NPDYKCGPPA RVSLSEFPDP
401: SGLPSNRTAF ASWQVACNIT QPVPPSCCVS FSSYLNDSII PCNTCACSDC SSKRVDKTCS TTSPALLLPP QALLIPFENR TKFAASWANL KHRKVPTLLP
501: CGDYCGVSIN WHLATDYRRG WSARITIFNW GGTNFADWSA AVELKNAAPD FEKAYSFNAT TVAVDGKNTT VLMEGLPGLN YLVAEVDAKN PSKDYRVPGK
601: QQSVISFTKK LNPGIKVGAG EGFPTKVFFN GQECSLPSII PSNGHKGRVS TFLLMVLPVF ALLSLWV
101: VFVGFAHKEI LVSASNAILE DGSSLPVSVE NGTTFAGYPA ADLKSAIMTA GDIKQMEARV ELVGTQFGVA PPGIPLPNNI TLVNDGWSCP KATKRDGNIL
201: EVCCMPDPKN ETDPIGEKLK PRQKGDLTIM YDIIRPYATS YWAQVTIENH NPLGRLDNWD LSFEWTKDEF ISQTKGAYPS VVDASACIDG PQGKHYDAVD
301: FSTVLSCARK PHIIDLPLTK YNDSNLGLKP YCCRNGTILS PSMDPTKSKS VFQMEVYKMP PNLNISAIAP PLSWKIKGNL NPDYKCGPPA RVSLSEFPDP
401: SGLPSNRTAF ASWQVACNIT QPVPPSCCVS FSSYLNDSII PCNTCACSDC SSKRVDKTCS TTSPALLLPP QALLIPFENR TKFAASWANL KHRKVPTLLP
501: CGDYCGVSIN WHLATDYRRG WSARITIFNW GGTNFADWSA AVELKNAAPD FEKAYSFNAT TVAVDGKNTT VLMEGLPGLN YLVAEVDAKN PSKDYRVPGK
601: QQSVISFTKK LNPGIKVGAG EGFPTKVFFN GQECSLPSII PSNGHKGRVS TFLLMVLPVF ALLSLWV
001: MGLTRNFILW ILLSSLFTAI QLTSSQRNTP PPRSKDADLC NGVFVSYTYL TGTKIKPNDT KNQPYRFESE ITVLNNGRDE LKSWQVFVKF AHREILVSAT
101: NAVLSDGSSL PASVENGTIF AGFPSADLKT AIMTAGDVTQ MEARVELVGT QFGVAPPSVP LPKNITLVND GWSCPKPTQQ GSNVLQVCCT PNPNITTSKI
201: GQKFLPRQEG DLTIMYDVTR AYQSSYSAQV TIENHNLLGR LDNWDLSFMW MKDEFLFSTK GAYPSVVDSS DCITGPQAKY YKDLDFSNVM SCARRPHIID
301: LPLTKYNDTN VGRIPYCCRN GTILPRSMDP EKSKSVFQIE VYKMPPDLNI SSITPPQSWQ IKGNLNPDYK CGPPLRVSSS QFPDTSGLPS NKSAFASWQV
401: VCNITQPTPP KCCVSFSSYF NDSVIPCKTC ACGGCSSDRV ARTCSTTSPA LPLPYQALLI PFDNRTKLTN AWAVLKNRKV PDPLPCGDNC GVSINWHLAT
501: DYRGGWTARV TLFNWGDTDF VDWFTAVELR NAAPGFQKAY SFNGSIIAVN GKNTTVLMEG LPGLNYLLAE KDGKNPSEDF RIPGKQQSVI SFTKKLTPGI
601: KVGSKDGFPT KVLFNGQECS LPSVLPTSNS HRKHVSTFLL ILTPFLALLF LRI
101: NAVLSDGSSL PASVENGTIF AGFPSADLKT AIMTAGDVTQ MEARVELVGT QFGVAPPSVP LPKNITLVND GWSCPKPTQQ GSNVLQVCCT PNPNITTSKI
201: GQKFLPRQEG DLTIMYDVTR AYQSSYSAQV TIENHNLLGR LDNWDLSFMW MKDEFLFSTK GAYPSVVDSS DCITGPQAKY YKDLDFSNVM SCARRPHIID
301: LPLTKYNDTN VGRIPYCCRN GTILPRSMDP EKSKSVFQIE VYKMPPDLNI SSITPPQSWQ IKGNLNPDYK CGPPLRVSSS QFPDTSGLPS NKSAFASWQV
401: VCNITQPTPP KCCVSFSSYF NDSVIPCKTC ACGGCSSDRV ARTCSTTSPA LPLPYQALLI PFDNRTKLTN AWAVLKNRKV PDPLPCGDNC GVSINWHLAT
501: DYRGGWTARV TLFNWGDTDF VDWFTAVELR NAAPGFQKAY SFNGSIIAVN GKNTTVLMEG LPGLNYLLAE KDGKNPSEDF RIPGKQQSVI SFTKKLTPGI
601: KVGSKDGFPT KVLFNGQECS LPSVLPTSNS HRKHVSTFLL ILTPFLALLF LRI
Arabidopsis Description
COBL8COBRA-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIB6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.