Factsheet for TraesCS4A01G117100.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G188600.1	Wheat	golgi	98.07	98.07
TraesCS4B01G187300.1	Wheat	golgi	97.03	97.9
Zm00001d028826_P001	Maize	plasma membrane	84.7	85.46
EER95000	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	84.55	84.93
Os03t0301200-01	Rice	extracellular, plasma membrane, vacuole	82.76	83.01
HORVU4Hr1G054770.1	Barley	plastid	95.39	81.27
GSMUA_AchrUn_...	Banana	plasma membrane	57.8	58.32
TraesCS2A01G092900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	59.44	57.8
GSMUA_Achr11P...	Banana	plasma membrane	57.8	57.54
KRH02312	Soybean	endoplasmic reticulum, extracellular	52.6	54.97
KRH50776	Soybean	endoplasmic reticulum, vacuole	52.45	54.9
PGSC0003DMT400065836	Potato	cytosol	38.19	54.8
VIT_05s0077g01470.t01	Wine grape	plasma membrane	51.56	53.3
CDY34424	Canola	plasma membrane	50.97	52.05
Bra033528.1-P	Field mustard	plasma membrane	50.97	52.05
CDY32210	Canola	plasma membrane	50.82	51.82
AT4G16120.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	50.22	51.13
KRH37033	Soybean	extracellular	48.29	50.0
PGSC0003DMT400065840	Potato	endoplasmic reticulum, extracellular, plasma membrane	48.14	49.77
VIT_07s0005g01020.t01	Wine grape	plasma membrane	47.55	49.46
Solyc09g075540.1.1	Tomato	plasma membrane	47.85	49.39
Solyc01g065530.2.1	Tomato	nucleus, plastid	47.55	49.38
AT3G16860.1	Thale cress	plasma membrane	47.85	49.31
CDY49611	Canola	plasma membrane	48.44	49.24
Bra036147.1-P	Field mustard	plasma membrane	48.44	49.24
CDY00037	Canola	plasma membrane	48.29	49.09
CDY52722	Canola	endoplasmic reticulum, plasma membrane, vacuole	48.14	48.72
AT5G49270.1	Thale cress	extracellular, plasma membrane, vacuole	47.85	48.57
CDY34980	Canola	endoplasmic reticulum, plasma membrane, vacuole	47.99	48.43
Bra021208.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	47.85	48.28
GSMUA_Achr8P10390_001	Banana	cytosol	17.24	46.4
TraesCS7A01G136600.1	Wheat	mitochondrion	45.91	45.85
TraesCS6A01G379800.1	Wheat	extracellular	18.57	27.96
TraesCS2A01G175000.1	Wheat	plasma membrane	18.28	27.39
TraesCS4A01G231200.1	Wheat	extracellular	18.72	27.39
TraesCS5A01G392000.1	Wheat	endoplasmic reticulum, extracellular, golgi	18.57	27.35
TraesCS3A01G409900.1	Wheat	plastid	10.85	26.35
TraesCS5A01G095200.1	Wheat	extracellular	17.53	26.28
TraesCS2A01G175100.1	Wheat	extracellular	17.68	26.27
TraesCS6A01G158000.1	Wheat	endoplasmic reticulum	13.08	25.29
TraesCS6A01G330900.1	Wheat	extracellular, plasma membrane	14.86	24.04
TraesCS2A01G388600.1	Wheat	extracellular, plasma membrane	12.93	23.32

Protein Annotations

EnsemblPlants:TraesCS4A01G117100.1	EnsemblPlantsGene:TraesCS4A01G117100	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987	GO:GO:0010215
GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007	InterPro:COBRA_pln
PANTHER:PTHR31052	PANTHER:PTHR31052:SF10	PFAM:PD140986	PFAM:PF04833	SEG:seg	SignalP:SignalP-noTM
MapMan:21.1.2.2	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:142796133..142798154

Molecular Weight (calculated)

72303.4 Da

IEP (calculated)

6.800

GRAVY (calculated)

-0.087

Length

673 amino acids

Sequence
(BLAST)

001: MAGSIAAQAA VLGAILLLAG LAAAQQTPRA PAAAAAPAPD PGCNGIQLTY ILQGREKIRP FVPDRNKQPY SFKANASVLN GGTRPLRSWA MLVTFGHDEI
101: LVGVGGAVLT GGAELPYNTT EDAGNATSFS GYPQTDLLTP IATAGDITQI QASVGLVGTL FAGPRGLVPE PLPTALTLDD PDYNCPAATN VTATMLTTCC
201: LLTPEAEANA TVPEANATDP TKSFLPRRTG DLVITYDVVQ AYPTSYLALV TLENNAKLGR LDNWRLSWEW RRGEFIYSMK GAHPLEVDVN GCIYGAPGQY
301: YQSLDFSQVL NCEKKPVILD LPLSRYNDTQ MGKIEHCCRN GTILPKSMDA AQSKSAFQMQ VFKMPPDTNR TKLFPPANFK ISGGSSLNPD YSCGQPVPVS
401: PTGFPNPSGL DSTTLAVATW QVVCNITTAK GAKPKCCVTF SAHYNDSVIP CNTCACGCPV NRRGPTCSTT APSMLLPPEA LLVPFDNRTQ KAQAWAQLKH
501: YNVPRPMPCG DFCGVSINWH VSSDFNKGWS ARVTLFNWGD VDMANWFAAM VMDKAYDGFE KAYSFNATAE GNNTIFMQGL EGLNYLVKQT NMSGSDYLVP
601: GKQQSVLSFT KKLTPDIDVV AGDGFPTKVF FNGDECAMPQ RFPLKSGGFR THLSSALAWV LLMASSALLL LQQ

Best Arabidopsis Sequence Match ( AT4G16120.1 )
(BLAST)

001: MDSAPNFIPR LLLLSLLIVS IPLTSSQSDA NTTNPSPSPP SDSDLCNGVF VSYTHTKGSK IPPNDTANQP YRFESVITVL NHGRDELKSW RVFVKFAHRE
101: ILVSASNAVL SDGSSLPVSV ENGTVFAGYP SSDLKSAIQT AGDVTQMQAR VELVGTQFGV APPNVPLPKN ITLATDGWKC PKATQKGTNV LQVCCIPDPD
201: YDNREIIDNE FLPRKDGDLT IMYDVVRSYS SNYMAQVTME NHNPLGRLDN WKLSFDWMRD EFIYTMKGAY PSIVDSSDCV DGPQAKHYQD LDFSNVLSCA
301: RRPTVIDLPP TKYNDSTFGL IPFCCRNGTI LPRSMDPSKS SSVFQMQVYK MPPDLNISAL SPPQNWRING TLNPDYKCGP PVRVSPSQFV DPSGLPSNRT
401: AFASWQVVCN ITQPKDASPR CCVSFSAYFN DSIVPCKTCA CGCSSNKAAR ACSATAPSLL LPQQALLVPF ENRTELTVAW AYLKQRPVPN PMPCGDNCGV
501: SINWHLATDY RGGWTARVTV FNWGETDFVD WFTAVQMKNA APGFEKAYSF NASTIGINGK NNTIFMEGLP GLNYLVAERD GENPLKNPRI PGKQQSVMSF
601: TKKLTPGINV PGGDGFPSKV FFNGEECSLP TILPMRSSQH RKHISVFLLA LPVLALLILR A

Arabidopsis Description

COBL7COBRA-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ17]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.