Factsheet for GSMUA_AchrUn_randomP11520_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	plasma membrane	84.56	83.43
PGSC0003DMT400065836	Potato	cytosol	41.68	59.28
Zm00001d028826_P001	Maize	plasma membrane	58.62	58.62
TraesCS4D01G188600.1	Wheat	golgi	58.77	58.25
Os03t0301200-01	Rice	extracellular, plasma membrane, vacuole	58.47	58.12
TraesCS4B01G187300.1	Wheat	golgi	58.02	58.02
TraesCS4A01G117100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	58.32	57.8
EER95000	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	57.87	57.61
KRH50776	Soybean	endoplasmic reticulum, vacuole	54.87	56.92
VIT_05s0077g01470.t01	Wine grape	plasma membrane	55.32	56.68
GSMUA_Achr8P10390_001	Banana	cytosol	21.14	56.4
KRH02312	Soybean	endoplasmic reticulum, extracellular	54.42	56.37
Zm00001d007208_P001	Maize	extracellular, plasma membrane, vacuole	53.67	54.74
AT4G16120.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	54.12	54.61
OQU90545	Sorghum	extracellular, plasma membrane, vacuole	53.07	53.56
Bra033528.1-P	Field mustard	plasma membrane	52.62	53.26
CDY34424	Canola	plasma membrane	52.62	53.26
CDY32210	Canola	plasma membrane	52.62	53.18
KRH37033	Soybean	extracellular	51.72	53.08
PGSC0003DMT400065840	Potato	endoplasmic reticulum, extracellular, plasma membrane	51.27	52.53
AT3G16860.1	Thale cress	plasma membrane	51.42	52.53
Solyc01g065530.2.1	Tomato	nucleus, plastid	50.67	52.16
Os07t0690900-01	Rice	plasma membrane	52.77	52.15
VIT_07s0005g01020.t01	Wine grape	plasma membrane	50.52	52.09
TraesCS2D01G092100.1	Wheat	plasma membrane	51.27	51.82
HORVU0Hr1G030030.1	Barley	extracellular, plasma membrane	51.27	51.74
TraesCS2B01G107700.1	Wheat	plasma membrane	50.82	51.44
Solyc09g075540.1.1	Tomato	plasma membrane	49.48	50.61
CDY52722	Canola	endoplasmic reticulum, plasma membrane, vacuole	50.08	50.23
Bra036147.1-P	Field mustard	plasma membrane	49.78	50.15
CDY49611	Canola	plasma membrane	49.78	50.15
CDY00037	Canola	plasma membrane	49.63	50.0
HORVU4Hr1G054770.1	Barley	plastid	58.62	49.49
CDY34980	Canola	endoplasmic reticulum, plasma membrane, vacuole	49.33	49.33
AT5G49270.1	Thale cress	extracellular, plasma membrane, vacuole	49.03	49.32
Bra021208.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	49.18	49.18
GSMUA_Achr4P33540_001	Banana	vacuole	49.03	49.17
GSMUA_Achr3P21560_001	Banana	plasma membrane	48.28	49.09
TraesCS2A01G092900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	50.52	48.7
HORVU2Hr1G015440.1	Barley	cytosol	40.18	48.64
GSMUA_Achr4P03210_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	19.79	29.53
GSMUA_Achr1P24500_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	19.34	28.17
GSMUA_Achr4P01440_001	Banana	extracellular, plasma membrane	19.19	28.01
GSMUA_Achr4P14440_001	Banana	plasma membrane	19.19	27.95
GSMUA_Achr4P27070_001	Banana	cytosol	16.34	26.33
GSMUA_Achr2P06240_001	Banana	mitochondrion	18.59	26.0

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP11520_001	EnsemblPlants:GSMUA_AchrUn_randomT11520_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG11520_001	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987
GO:GO:0010215	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225
GO:GO:0040007	InterPro:COBRA_pln	PANTHER:PTHR31052	PFAM:PD140986	PFAM:PF04833	SEG:seg
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00029535F4	UniProt:M0U8B1	MapMan:21.1.2.2	:

Description

COBRA-like protein 7 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG11520_001]

Coordinates

chrchrUn_random:+:56088548..56090551

Molecular Weight (calculated)

72931.4 Da

IEP (calculated)

4.689

GRAVY (calculated)

-0.131

Length

667 amino acids

Sequence
(BLAST)

001: MDWCSRPSFV ILLVVLLLSV DDSRSQAPAA TPTPAPVPAP SPDAICNGIY LSYVLEKREK IHPFTSDPAD QPYSFGATAT VLNHGASDLL SWTLLIPFRH
101: RELIVSVGGG VLTNGSTFPY NTTLDANATA FSGYPNTDLK TAIETANDLS QIEAKITLVG TFFGSPPPSV PLPEFLVLDD PSYSCPRPTV YNDSYAVDTC
201: CLPNPNYVPK EINVTGFLPR LSGDLIISYD VLQSYGSSYL ALVTIENHNP LGRLDRWQLS WEWARNEFIY SMKGAYPSVV DVSDCVFGKQ GQYYQDLDFS
301: KVLSCKRNPT IVDLTPWQYN NTDLGRIPHC CRNGTILPPE MDPEQAVSAF QVQVYKMPPD LNRSVLFPPV NWNISGTLNP DYQCGQPNRV SPTAFPDSSG
401: LDSDSLALAS WQVVCNISRP KGASPKCCVS FSAFYNDSVV PCKTCACGCR AGTSGPTCNA TAPALLLPPE ALLVPFDNRT AKAVAWAEMK HYNVPSPLPC
501: GDYCGVSINW HVLTNYNKGW SARVTLFNWR EDQFADWFLA VRMDKAYAGY EQMYSFNGTA MGDNTIFMQG RPGLDYLNGE ANGNNPDNDP RVPGKQQSVM
601: SFTKTKTPGI DITAGDGYPS KVYFNGEECS MPEMIPTNWA PRSGGGIGLV TLLLLVLAVV ALVILEP

Best Arabidopsis Sequence Match ( AT4G16120.1 )
(BLAST)

001: MDSAPNFIPR LLLLSLLIVS IPLTSSQSDA NTTNPSPSPP SDSDLCNGVF VSYTHTKGSK IPPNDTANQP YRFESVITVL NHGRDELKSW RVFVKFAHRE
101: ILVSASNAVL SDGSSLPVSV ENGTVFAGYP SSDLKSAIQT AGDVTQMQAR VELVGTQFGV APPNVPLPKN ITLATDGWKC PKATQKGTNV LQVCCIPDPD
201: YDNREIIDNE FLPRKDGDLT IMYDVVRSYS SNYMAQVTME NHNPLGRLDN WKLSFDWMRD EFIYTMKGAY PSIVDSSDCV DGPQAKHYQD LDFSNVLSCA
301: RRPTVIDLPP TKYNDSTFGL IPFCCRNGTI LPRSMDPSKS SSVFQMQVYK MPPDLNISAL SPPQNWRING TLNPDYKCGP PVRVSPSQFV DPSGLPSNRT
401: AFASWQVVCN ITQPKDASPR CCVSFSAYFN DSIVPCKTCA CGCSSNKAAR ACSATAPSLL LPQQALLVPF ENRTELTVAW AYLKQRPVPN PMPCGDNCGV
501: SINWHLATDY RGGWTARVTV FNWGETDFVD WFTAVQMKNA APGFEKAYSF NASTIGINGK NNTIFMEGLP GLNYLVAERD GENPLKNPRI PGKQQSVMSF
601: TKKLTPGINV PGGDGFPSKV FFNGEECSLP TILPMRSSQH RKHISVFLLA LPVLALLILR A

Arabidopsis Description

COBL7COBRA-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ17]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.