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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:golgi
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:plasma membrane
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU90545 Sorghum extracellular, plasma membrane, vacuole 65.63 67.02
Zm00001d007208_P001 Maize extracellular, plasma membrane, vacuole 64.44 66.51
TraesCS2D01G092100.1 Wheat plasma membrane 64.3 65.76
TraesCS2B01G107700.1 Wheat plasma membrane 63.26 64.8
HORVU0Hr1G030030.1 Barley extracellular, plasma membrane 63.41 64.75
Os03t0301200-01 Rice extracellular, plasma membrane, vacuole 63.11 63.49
TraesCS2A01G092900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 63.41 61.85
HORVU2Hr1G015440.1 Barley cytosol 49.19 60.25
GSMUA_AchrUn_... Banana plasma membrane 52.15 52.77
GSMUA_Achr11P... Banana plasma membrane 52.3 52.22
KRH50776 Soybean endoplasmic reticulum, vacuole 47.11 49.46
PGSC0003DMT400065836 Potato cytosol 33.93 48.83
KRH02312 Soybean endoplasmic reticulum, extracellular 46.37 48.6
VIT_05s0077g01470.t01 Wine grape plasma membrane 46.37 48.08
AT4G16120.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 46.81 47.81
Bra033528.1-P Field mustard plasma membrane 45.63 46.74
CDY32210 Canola plasma membrane 45.48 46.52
CDY34424 Canola plasma membrane 45.33 46.43
KRH37033 Soybean extracellular 44.59 46.31
Bra036147.1-P Field mustard plasma membrane 45.04 45.92
CDY49611 Canola plasma membrane 44.89 45.77
CDY00037 Canola plasma membrane 44.74 45.62
GSMUA_Achr8P10390_001 Banana cytosol 16.89 45.6
Solyc01g065530.2.1 Tomato nucleus, plastid 43.56 45.37
AT3G16860.1 Thale cress plasma membrane 43.85 45.33
PGSC0003DMT400065840 Potato endoplasmic reticulum, extracellular, plasma membrane 43.7 45.31
AT5G49270.1 Thale cress extracellular, plasma membrane, vacuole 44.3 45.1
CDY52722 Canola endoplasmic reticulum, plasma membrane, vacuole 44.3 44.96
CDY34980 Canola endoplasmic reticulum, plasma membrane, vacuole 44.15 44.68
Solyc09g075540.1.1 Tomato plasma membrane 43.11 44.63
Bra021208.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 43.85 44.38
VIT_07s0005g01020.t01 Wine grape plasma membrane 42.37 44.2
Os06t0685100-00 Rice plasma membrane 42.81 42.31
Os10t0497700-01 Rice extracellular 18.37 29.18
Os03t0754500-00 Rice extracellular 9.19 28.97
Os07t0604400-00 Rice extracellular 18.96 28.38
Os05t0386800-01 Rice extracellular 19.11 28.23
Os03t0416300-01 Rice extracellular 19.11 28.17
Os07t0604300-01 Rice extracellular 18.37 27.8
Os03t0416200-01 Rice extracellular, golgi, plasma membrane 18.37 26.5
Os04t0540300-00 Rice plasma membrane 16.74 25.74
Protein Annotations
MapMan:21.1.2.2EntrezGene:4344368ProteinID:BAC16043.1ProteinID:BAF22628.1ProteinID:BAT03332.1InterPro:COBRA_pln
ProteinID:EAZ41173.1GO:GO:0005575GO:GO:0008150GO:GO:0009987GO:GO:0010215GO:GO:0016020
GO:GO:0016021GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007EnsemblPlantsGene:Os07g0690900
EnsemblPlants:Os07t0690900-01PFAM:PD140986PFAM:PF04833PANTHER:PTHR31052PANTHER:PTHR31052:SF10UniProt:Q8H3Y9
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00000AD781RefSeq:XP_015645132.1SEG:seg:
Description
Glycosyl-phosphatidyl inositol-anchored, plant domain containing protein. (Os07t0690900-01)
Coordinates
chr7:-:29382741..29385022
Molecular Weight (calculated)
72554.9 Da
IEP (calculated)
6.390
GRAVY (calculated)
0.010
Length
675 amino acids
Sequence
(BLAST)
001: MAVFIIANNP LARYAVLFAA AVFLVAAAQA QPTTPPPPPP PEMDCNGILL TYNLDRRDKI RPFVAAPEAD AQPYSFRATA TVLNSGTRAL RSWTLRLTFH
101: HREILVQLDG AVLTSGADLP YNTTADNATS FSGYPQTDLL TPIATAGDLT KIQATLNLVG TLFAGPPPYV PLPSALSLAD PSYTCPPAIN VSTSTLSTCC
201: ILTPEAAANA SAGDLDAGRA TSYLPRGAGD LVITYDVLQA HETTYLAQVT LENDALLGRL DGWELSWEWL RGEFISSMRG AYPRQVGATD CVYGAQGAFY
301: KGLDFSKVLN CDRKPAVLDL PPSRRGDEDI GGIDHCCRNG TMLPKSVDAA QSKSAFQMEV YKMPPDLNRT KLYAPANFRV SGASPLNPEY ACGQPVRVTP
401: TELPDPSGLA STTLALATWQ VVCNMTAAPP SKPPSCCVTF SAFYNESVIP CRTCACGCPA SPAAACSTTA PSMLLPPYAL LMPFERRGRE AVWWAGEKRL
501: GVPRPMPCGD SCGVSINWHV ATDYAGGWSA RATLFNWEGA DVAEWFLAVA MEKQAYDGFE QAFTFNATAM GNGTTMILMK GREGFQYLKR ESNMSGVDYP
601: VAGKQQSVLL FTKKRSGGGI DVVGGDGFPT RVLFNGHECA MPQRIPSSAH RRCLVLLWTT LLVFMSSILL VLSLL
Best Arabidopsis Sequence Match ( AT4G16120.1 )
(BLAST)
001: MDSAPNFIPR LLLLSLLIVS IPLTSSQSDA NTTNPSPSPP SDSDLCNGVF VSYTHTKGSK IPPNDTANQP YRFESVITVL NHGRDELKSW RVFVKFAHRE
101: ILVSASNAVL SDGSSLPVSV ENGTVFAGYP SSDLKSAIQT AGDVTQMQAR VELVGTQFGV APPNVPLPKN ITLATDGWKC PKATQKGTNV LQVCCIPDPD
201: YDNREIIDNE FLPRKDGDLT IMYDVVRSYS SNYMAQVTME NHNPLGRLDN WKLSFDWMRD EFIYTMKGAY PSIVDSSDCV DGPQAKHYQD LDFSNVLSCA
301: RRPTVIDLPP TKYNDSTFGL IPFCCRNGTI LPRSMDPSKS SSVFQMQVYK MPPDLNISAL SPPQNWRING TLNPDYKCGP PVRVSPSQFV DPSGLPSNRT
401: AFASWQVVCN ITQPKDASPR CCVSFSAYFN DSIVPCKTCA CGCSSNKAAR ACSATAPSLL LPQQALLVPF ENRTELTVAW AYLKQRPVPN PMPCGDNCGV
501: SINWHLATDY RGGWTARVTV FNWGETDFVD WFTAVQMKNA APGFEKAYSF NASTIGINGK NNTIFMEGLP GLNYLVAERD GENPLKNPRI PGKQQSVMSF
601: TKKLTPGINV PGGDGFPSKV FFNGEECSLP TILPMRSSQH RKHISVFLLA LPVLALLILR A
Arabidopsis Description
COBL7COBRA-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ17]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.