Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 7
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033528.1-P | Field mustard | plasma membrane | 99.09 | 99.24 |
| CDY34424 | Canola | plasma membrane | 98.33 | 98.48 |
| AT4G16120.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 87.12 | 86.99 |
| CDY52722 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 70.76 | 70.23 |
| CDY34980 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 68.79 | 68.07 |
| KRH50776 | Soybean | endoplasmic reticulum, vacuole | 65.3 | 67.03 |
| VIT_05s0077g01470.t01 | Wine grape | plasma membrane | 65.91 | 66.82 |
| KRH02312 | Soybean | endoplasmic reticulum, extracellular | 65.0 | 66.61 |
| PGSC0003DMT400065836 | Potato | cytosol | 47.27 | 66.52 |
| CDY49611 | Canola | plasma membrane | 64.7 | 64.5 |
| CDY00037 | Canola | plasma membrane | 64.55 | 64.35 |
| PGSC0003DMT400065840 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 61.82 | 62.67 |
| Solyc01g065530.2.1 | Tomato | nucleus, plastid | 61.21 | 62.35 |
| Solyc09g075540.1.1 | Tomato | plasma membrane | 59.39 | 60.12 |
| VIT_07s0005g01020.t01 | Wine grape | plasma membrane | 58.64 | 59.81 |
| KRH37033 | Soybean | extracellular | 58.18 | 59.08 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 53.18 | 52.62 |
| GSMUA_Achr11P... | Banana | plasma membrane | 53.64 | 52.37 |
| Zm00001d028826_P001 | Maize | plasma membrane | 52.88 | 52.32 |
| CDY19626 | Canola | mitochondrion | 32.58 | 52.18 |
| EER95000 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 52.58 | 51.79 |
| TraesCS4B01G187300.1 | Wheat | golgi | 51.82 | 51.27 |
| Os03t0301200-01 | Rice | extracellular, plasma membrane, vacuole | 51.82 | 50.97 |
| TraesCS4A01G117100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 51.82 | 50.82 |
| TraesCS4D01G188600.1 | Wheat | golgi | 51.82 | 50.82 |
| Zm00001d007208_P001 | Maize | extracellular, plasma membrane, vacuole | 49.7 | 50.15 |
| CDY36030 | Canola | vacuole | 49.09 | 50.0 |
| CDY57659 | Canola | cytosol | 11.52 | 49.67 |
| OQU90545 | Sorghum | extracellular, plasma membrane, vacuole | 49.7 | 49.62 |
| CDX82237 | Canola | endoplasmic reticulum, vacuole | 49.7 | 49.1 |
| TraesCS2B01G107700.1 | Wheat | plasma membrane | 47.27 | 47.34 |
| GSMUA_Achr8P10390_001 | Banana | cytosol | 17.88 | 47.2 |
| TraesCS2D01G092100.1 | Wheat | plasma membrane | 46.52 | 46.52 |
| HORVU0Hr1G030030.1 | Barley | extracellular, plasma membrane | 46.52 | 46.44 |
| CDY29275 | Canola | extracellular, plasma membrane, vacuole | 46.67 | 46.32 |
| CDX97377 | Canola | endoplasmic reticulum, golgi, vacuole | 46.36 | 46.02 |
| CDX89278 | Canola | extracellular, golgi, vacuole | 46.21 | 46.0 |
| CDY09102 | Canola | cytosol | 18.18 | 45.98 |
| Os07t0690900-01 | Rice | plasma membrane | 46.52 | 45.48 |
| CDY14283 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 46.52 | 44.95 |
| HORVU2Hr1G015440.1 | Barley | cytosol | 37.42 | 44.83 |
| TraesCS2A01G092900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 46.67 | 44.51 |
| HORVU4Hr1G054770.1 | Barley | plastid | 51.82 | 43.29 |
| CDY55591 | Canola | plasma membrane | 49.09 | 38.94 |
| CDY43072 | Canola | plasma membrane | 48.94 | 38.22 |
| CDX90983 | Canola | extracellular | 18.79 | 28.51 |
| CDY70289 | Canola | extracellular | 17.12 | 28.46 |
| CDX93481 | Canola | plasma membrane | 18.79 | 28.25 |
| CDY66895 | Canola | cytosol | 2.42 | 28.07 |
| CDX85277 | Canola | extracellular | 18.33 | 27.75 |
| CDY60470 | Canola | plasma membrane | 19.09 | 27.51 |
| CDX85543 | Canola | extracellular, plasma membrane, vacuole | 18.94 | 27.41 |
| CDX86358 | Canola | extracellular | 18.03 | 27.29 |
| CDY31063 | Canola | plasma membrane | 17.88 | 27.19 |
| CDY43250 | Canola | plasma membrane | 18.79 | 27.13 |
| CDY02184 | Canola | plasma membrane | 18.79 | 27.13 |
| CDY58691 | Canola | plasma membrane | 18.48 | 26.64 |
| CDY20671 | Canola | extracellular, plasma membrane, vacuole | 18.33 | 26.59 |
| CDX69511 | Canola | plasma membrane | 18.33 | 26.59 |
| CDY26444 | Canola | plastid | 14.55 | 26.23 |
| CDY02181 | Canola | endoplasmic reticulum, extracellular | 8.18 | 26.21 |
| CDY16831 | Canola | plasma membrane | 18.18 | 26.2 |
| CDX87193 | Canola | plasma membrane | 18.03 | 26.1 |
| CDY58695 | Canola | extracellular | 8.03 | 25.73 |
| CDY24004 | Canola | cytosol, nucleus, plastid | 3.18 | 24.71 |
| CDY42842 | Canola | cytosol | 4.55 | 24.59 |
| CDY29033 | Canola | cytosol | 6.06 | 21.98 |
| CDX94950 | Canola | nucleus | 17.42 | 20.18 |
| CDY26445 | Canola | cytosol | 4.85 | 18.93 |
| CDX87194 | Canola | mitochondrion | 5.61 | 17.7 |
| CDY14723 | Canola | cytosol | 8.18 | 16.98 |
| CDX70627 | Canola | cytosol, nucleus, plasma membrane | 18.64 | 14.34 |
Protein Annotations
| MapMan:21.1.2.2 | GO:A0A078H0J3 | UniProt:A0A078H0J3 | EnsemblPlants:CDY32210 | ProteinID:CDY32210 | ProteinID:CDY32210.1 |
| InterPro:COBRA_pln | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010215 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 | EnsemblPlantsGene:GSBRNA2T00051640001 | PFAM:PD140986 |
| PFAM:PF04833 | PANTHER:PTHR31052 | PANTHER:PTHR31052:SF3 | SignalP:SignalP-noTM | UniParc:UPI0004EDF9D6 | SEG:seg |
Description
BnaA01g17740DBnaA01g17740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0J3]
Coordinates
chrLK032290:-:2213..5080
Molecular Weight (calculated)
72337.0 Da
IEP (calculated)
6.722
GRAVY (calculated)
-0.196
Length
660 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSAPNFIPL PLLLLSLLLL ASIPLTTSQS AADTNSSSPS DSDLCNGVFV SYTHTKGSKI PPNDSSNQPY RFESVVTVLN NGRDELKSWR VFVNFSHREI
101: LVSASNAVLS DGSSLPLSVE NGTVFAGYPS SDLKSAIQTA GDVTQMQASV ELVGTQFGVA PPNVPLPKNI SLVTDGWKCP KATQKGKNVL QVCCMPDPDF
201: NNTEIIDNEF LPRQNGDLTI MYDVIRSYSS NYMAQVTMEN HNPLGRLDNW KLSFDWMRDE FIDTMTGAYP SLVDSSDCID GPQAKYYQAL DFSNVLSCAR
301: RPTIIDLPLT KYNDSVFGFK PYCCRNGTIL PKSMDPSKSI SAFQMQVYKM PPDLNISALS PPQNWRITGS LNPDYKCGPP VRVSPSQFVD PSGLPSNKTA
401: FASWQVVCNI TQQKDTSPRC CVSFSAYFND SIIPCKTCAC GCSSNRASRT CSTTSPALLL PQQALLVPFE NRTELTLAWS YLKHRPVPNP MPCGDNCGVS
501: INWHLATDYR GGWTARVTVF NWGETNFPDW FTAIQMKKAA PGFEKAYSFN ATALDINGEN NTIFMEGLPG LNYLVAERDG DNPLKNPRVP GKQQSVISFT
601: KKLTPGINVP GGDGFPSKVF FNGEECSLPS IFPTSNGNKL RHISAILLAL PVLALLILRV
101: LVSASNAVLS DGSSLPLSVE NGTVFAGYPS SDLKSAIQTA GDVTQMQASV ELVGTQFGVA PPNVPLPKNI SLVTDGWKCP KATQKGKNVL QVCCMPDPDF
201: NNTEIIDNEF LPRQNGDLTI MYDVIRSYSS NYMAQVTMEN HNPLGRLDNW KLSFDWMRDE FIDTMTGAYP SLVDSSDCID GPQAKYYQAL DFSNVLSCAR
301: RPTIIDLPLT KYNDSVFGFK PYCCRNGTIL PKSMDPSKSI SAFQMQVYKM PPDLNISALS PPQNWRITGS LNPDYKCGPP VRVSPSQFVD PSGLPSNKTA
401: FASWQVVCNI TQQKDTSPRC CVSFSAYFND SIIPCKTCAC GCSSNRASRT CSTTSPALLL PQQALLVPFE NRTELTLAWS YLKHRPVPNP MPCGDNCGVS
501: INWHLATDYR GGWTARVTVF NWGETNFPDW FTAIQMKKAA PGFEKAYSFN ATALDINGEN NTIFMEGLPG LNYLVAERDG DNPLKNPRVP GKQQSVISFT
601: KKLTPGINVP GGDGFPSKVF FNGEECSLPS IFPTSNGNKL RHISAILLAL PVLALLILRV
001: MDSAPNFIPR LLLLSLLIVS IPLTSSQSDA NTTNPSPSPP SDSDLCNGVF VSYTHTKGSK IPPNDTANQP YRFESVITVL NHGRDELKSW RVFVKFAHRE
101: ILVSASNAVL SDGSSLPVSV ENGTVFAGYP SSDLKSAIQT AGDVTQMQAR VELVGTQFGV APPNVPLPKN ITLATDGWKC PKATQKGTNV LQVCCIPDPD
201: YDNREIIDNE FLPRKDGDLT IMYDVVRSYS SNYMAQVTME NHNPLGRLDN WKLSFDWMRD EFIYTMKGAY PSIVDSSDCV DGPQAKHYQD LDFSNVLSCA
301: RRPTVIDLPP TKYNDSTFGL IPFCCRNGTI LPRSMDPSKS SSVFQMQVYK MPPDLNISAL SPPQNWRING TLNPDYKCGP PVRVSPSQFV DPSGLPSNRT
401: AFASWQVVCN ITQPKDASPR CCVSFSAYFN DSIVPCKTCA CGCSSNKAAR ACSATAPSLL LPQQALLVPF ENRTELTVAW AYLKQRPVPN PMPCGDNCGV
501: SINWHLATDY RGGWTARVTV FNWGETDFVD WFTAVQMKNA APGFEKAYSF NASTIGINGK NNTIFMEGLP GLNYLVAERD GENPLKNPRI PGKQQSVMSF
601: TKKLTPGINV PGGDGFPSKV FFNGEECSLP TILPMRSSQH RKHISVFLLA LPVLALLILR A
101: ILVSASNAVL SDGSSLPVSV ENGTVFAGYP SSDLKSAIQT AGDVTQMQAR VELVGTQFGV APPNVPLPKN ITLATDGWKC PKATQKGTNV LQVCCIPDPD
201: YDNREIIDNE FLPRKDGDLT IMYDVVRSYS SNYMAQVTME NHNPLGRLDN WKLSFDWMRD EFIYTMKGAY PSIVDSSDCV DGPQAKHYQD LDFSNVLSCA
301: RRPTVIDLPP TKYNDSTFGL IPFCCRNGTI LPRSMDPSKS SSVFQMQVYK MPPDLNISAL SPPQNWRING TLNPDYKCGP PVRVSPSQFV DPSGLPSNRT
401: AFASWQVVCN ITQPKDASPR CCVSFSAYFN DSIVPCKTCA CGCSSNKAAR ACSATAPSLL LPQQALLVPF ENRTELTVAW AYLKQRPVPN PMPCGDNCGV
501: SINWHLATDY RGGWTARVTV FNWGETDFVD WFTAVQMKNA APGFEKAYSF NASTIGINGK NNTIFMEGLP GLNYLVAERD GENPLKNPRI PGKQQSVMSF
601: TKKLTPGINV PGGDGFPSKV FFNGEECSLP TILPMRSSQH RKHISVFLLA LPVLALLILR A
Arabidopsis Description
COBL7COBRA-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ17]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.