Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 7
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:golgi
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d007208_P001 Maize extracellular, plasma membrane, vacuole 83.96 84.86
Os07t0690900-01 Rice plasma membrane 67.02 65.63
TraesCS2B01G107700.1 Wheat plasma membrane 65.36 65.55
HORVU0Hr1G030030.1 Barley extracellular, plasma membrane 65.51 65.51
TraesCS2D01G092100.1 Wheat plasma membrane 65.36 65.45
EER95000 Sorghum endoplasmic reticulum, extracellular, plasma membrane 65.2 64.33
TraesCS2A01G092900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 64.75 61.85
HORVU2Hr1G015440.1 Barley cytosol 50.83 60.98
GSMUA_Achr11P... Banana plasma membrane 54.46 53.25
GSMUA_AchrUn_... Banana plasma membrane 53.56 53.07
PGSC0003DMT400065836 Potato cytosol 36.61 51.6
VIT_05s0077g01470.t01 Wine grape plasma membrane 49.92 50.69
CDY32210 Canola plasma membrane 49.62 49.7
Bra033528.1-P Field mustard plasma membrane 49.47 49.62
CDY34424 Canola plasma membrane 49.47 49.62
KRH50776 Soybean endoplasmic reticulum, vacuole 48.26 49.61
KRH02312 Soybean endoplasmic reticulum, extracellular 47.96 49.22
AT4G16120.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 49.02 49.02
KRH37033 Soybean extracellular 47.5 48.31
PGSC0003DMT400065840 Potato endoplasmic reticulum, extracellular, plasma membrane 46.44 47.16
Solyc09g075540.1.1 Tomato plasma membrane 46.44 47.09
Solyc01g065530.2.1 Tomato nucleus, plastid 45.99 46.91
CDY52722 Canola endoplasmic reticulum, plasma membrane, vacuole 47.05 46.77
AT3G16860.1 Thale cress plasma membrane 46.14 46.71
Bra021208.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 46.75 46.33
Bra036147.1-P Field mustard plasma membrane 46.29 46.22
CDY49611 Canola plasma membrane 46.29 46.22
CDY34980 Canola endoplasmic reticulum, plasma membrane, vacuole 46.6 46.18
CDY00037 Canola plasma membrane 46.14 46.07
VIT_07s0005g01020.t01 Wine grape plasma membrane 44.78 45.75
AT5G49270.1 Thale cress extracellular, plasma membrane, vacuole 44.93 44.8
GSMUA_Achr8P10390_001 Banana cytosol 16.64 44.0
KXG36369 Sorghum mitochondrion 44.48 43.69
EER90859 Sorghum extracellular 18.46 28.71
EER94687 Sorghum extracellular 19.21 28.48
EER90860 Sorghum extracellular, golgi, plasma membrane 19.06 28.06
EER99679 Sorghum plasma membrane 18.61 27.58
EER97506 Sorghum extracellular, plasma membrane 17.55 25.33
KXG26803 Sorghum extracellular, plasma membrane 16.79 24.83
OQU92393 Sorghum extracellular 16.79 24.08
Protein Annotations
MapMan:21.1.2.2EntrezGene:8084974UniProt:A0A1W0W886InterPro:COBRA_plnGO:GO:0005575GO:GO:0008150
GO:GO:0009987GO:GO:0010215GO:GO:0016020GO:GO:0016043GO:GO:0016049GO:GO:0031225
GO:GO:0040007EnsemblPlants:OQU90545ProteinID:OQU90545ProteinID:OQU90545.1PFAM:PD140986PFAM:PF04833
PANTHER:PTHR31052PANTHER:PTHR31052:SF10EnsemblPlantsGene:SORBI_3002G427400SignalP:SignalP-noTMUniParc:UPI0001A848D2RefSeq:XP_002463437.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr2:-:77388760..77390745
Molecular Weight (calculated)
71195.4 Da
IEP (calculated)
4.975
GRAVY (calculated)
-0.061
Length
661 amino acids
Sequence
(BLAST)
001: MAMAMPVAQL SFVFLVLLLA HTASAQLAPA PAPDAGCNGI FLSYSLQGRD QIRPHVAEAE RNSQPYSFRA RATVVNSDTR PLRSWALQVT FVHGEILVSV
101: DGAVLTSGAD LPYNTTAGDA GRPTSFTGYP QTDLLTPIST AGDPAKTQAT VNLVGTLFAG PRPYEPLPSF LSLADPSYTC PPATNATSPT NLTTCCVFTA
201: DDDGTDPARS LSFLPRRTGD LVITYDVLQS HETTYLALVT LENDAPLGRL DGWQLSWRWQ REEFISTMRG AYPREVDTAG CLYGPQGQYY KGLDLSKVLN
301: CDRTPVVHDL PLSRANDTDI GRIDHCCRNG TVLPKSMDAA AQSKSAFQME VYKMPPDLNR TKLYPPTGFN VTGSSPFNPE YACGAPIPVT PSEYPDPSGL
401: ASTTAAVATW QVVCNITTAS KPPRCCVSFS AFYNESVVPC RTCACGCPAT QPATATCSTT APAMLLPPQA LLMPFDRRAS EALEWADQKH LGVPNPMPCG
501: DFCGVSINWH VATDFTGGWS ARLTLFNWDA TDMPDWFTAI VMDGAYDGFE QAYSFNATRV GNNTIFVKGS QGFNFLLGES NMSGVDYPVP GKLQSVFSFT
601: KKTTPGIDVI AGDGFPSKVF FNGDECAMPL RIPSQGTKPA ALPVPLHLCL LLLSTFLLLA Y
Best Arabidopsis Sequence Match ( AT4G16120.1 )
(BLAST)
001: MDSAPNFIPR LLLLSLLIVS IPLTSSQSDA NTTNPSPSPP SDSDLCNGVF VSYTHTKGSK IPPNDTANQP YRFESVITVL NHGRDELKSW RVFVKFAHRE
101: ILVSASNAVL SDGSSLPVSV ENGTVFAGYP SSDLKSAIQT AGDVTQMQAR VELVGTQFGV APPNVPLPKN ITLATDGWKC PKATQKGTNV LQVCCIPDPD
201: YDNREIIDNE FLPRKDGDLT IMYDVVRSYS SNYMAQVTME NHNPLGRLDN WKLSFDWMRD EFIYTMKGAY PSIVDSSDCV DGPQAKHYQD LDFSNVLSCA
301: RRPTVIDLPP TKYNDSTFGL IPFCCRNGTI LPRSMDPSKS SSVFQMQVYK MPPDLNISAL SPPQNWRING TLNPDYKCGP PVRVSPSQFV DPSGLPSNRT
401: AFASWQVVCN ITQPKDASPR CCVSFSAYFN DSIVPCKTCA CGCSSNKAAR ACSATAPSLL LPQQALLVPF ENRTELTVAW AYLKQRPVPN PMPCGDNCGV
501: SINWHLATDY RGGWTARVTV FNWGETDFVD WFTAVQMKNA APGFEKAYSF NASTIGINGK NNTIFMEGLP GLNYLVAERD GENPLKNPRI PGKQQSVMSF
601: TKKLTPGINV PGGDGFPSKV FFNGEECSLP TILPMRSSQH RKHISVFLLA LPVLALLILR A
Arabidopsis Description
COBL7COBRA-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ17]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.