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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, secretory
iPSORT:secretory
MultiLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU0Hr1G030030.1 Barley extracellular, plasma membrane 90.38 75.34
TraesCS2D01G092100.1 Wheat plasma membrane 82.94 69.24
TraesCS2B01G107700.1 Wheat plasma membrane 81.85 68.44
TraesCS2A01G092900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 82.94 66.04
Zm00001d007208_P001 Maize extracellular, plasma membrane, vacuole 60.44 50.92
OQU90545 Sorghum extracellular, plasma membrane, vacuole 60.98 50.83
Os07t0690900-01 Rice plasma membrane 60.25 49.19
PGSC0003DMT400065836 Potato cytosol 41.38 48.61
GSMUA_Achr8P10390_001 Banana cytosol 19.42 42.8
GSMUA_AchrUn_... Banana plasma membrane 48.64 40.18
GSMUA_Achr11P... Banana plasma membrane 48.64 39.65
VIT_05s0077g01470.t01 Wine grape plasma membrane 46.46 39.32
HORVU4Hr1G054770.1 Barley plastid 55.72 38.86
KRH50776 Soybean endoplasmic reticulum, vacuole 44.65 38.26
KRH02312 Soybean endoplasmic reticulum, extracellular 44.1 37.73
Bra033528.1-P Field mustard plasma membrane 44.83 37.48
CDY32210 Canola plasma membrane 44.83 37.42
AT4G16120.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 44.46 37.07
Solyc01g065530.2.1 Tomato nucleus, plastid 43.56 37.04
CDY34424 Canola plasma membrane 44.28 37.03
Solyc09g075540.1.1 Tomato plasma membrane 43.74 36.96
KRH37033 Soybean extracellular 43.19 36.62
PGSC0003DMT400065840 Potato endoplasmic reticulum, extracellular, plasma membrane 43.19 36.56
VIT_07s0005g01020.t01 Wine grape plasma membrane 42.83 36.48
AT3G16860.1 Thale cress plasma membrane 43.01 36.29
Bra036147.1-P Field mustard plasma membrane 43.01 35.8
CDY49611 Canola plasma membrane 43.01 35.8
CDY00037 Canola plasma membrane 42.83 35.65
CDY52722 Canola endoplasmic reticulum, plasma membrane, vacuole 42.83 35.49
AT5G49270.1 Thale cress extracellular, plasma membrane, vacuole 42.65 35.44
CDY34980 Canola endoplasmic reticulum, plasma membrane, vacuole 42.29 34.93
Bra021208.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 41.92 34.63
HORVU7Hr1G028350.1 Barley golgi, mitochondrion, plasma membrane 41.38 33.93
HORVU2Hr1G033060.13 Barley mitochondrion 20.51 25.28
HORVU4Hr1G014530.1 Barley extracellular 20.69 24.62
HORVU3Hr1G009960.1 Barley plastid 9.26 23.39
HORVU5Hr1G096010.13 Barley endoplasmic reticulum 11.8 23.3
HORVU5Hr1G095910.12 Barley extracellular, vacuole 19.24 23.04
HORVU0Hr1G004650.3 Barley mitochondrion 17.24 22.89
HORVU3Hr1G007580.2 Barley extracellular 15.06 22.13
HORVU2Hr1G033070.14 Barley mitochondrion 18.51 21.7
HORVU5Hr1G067940.1 Barley plasma membrane, plastid 18.51 21.61
HORVU2Hr1G033080.1 Barley extracellular 6.53 19.57
HORVU2Hr1G092510.1 Barley mitochondrion 7.8 13.44
Protein Annotations
EnsemblPlants:HORVU2Hr1G015440.1EnsemblPlantsGene:HORVU2Hr1G015440GO:GO:0005575GO:GO:0008150GO:GO:0009987GO:GO:0010215
GO:GO:0016020GO:GO:0016021GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007
InterPro:COBRA_plnPANTHER:PTHR31052PANTHER:PTHR31052:SF3PFAM:PD140986PFAM:PF04833PIRSF:PIRSF038122
SEG:segTMHMM:TMhelixUniParc:UPI000B4683A2UniProt:A0A287H5W0MapMan:21.1.2.2:
Description
No Description!
Coordinates
chrchr2H:+:34209609..34211264
Molecular Weight (calculated)
54697.9 Da
IEP (calculated)
4.794
GRAVY (calculated)
-0.088
Length
551 amino acids
Sequence
(BLAST)
001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXPEPVVTL PSAISLADPA YACLPVATAP TVLSACCVLN APDQPAADPP AGNAYLPRVT
101: GDLVITYDVL QAHETTYLAL VTLENNAPMG RLDGWELSWE WRRGEFVNSM RGAYPRAVDT RGCLYGPQGQ YYKDLDFSKV LNCERWPVVH DLPPSRRDDT
201: SLGQIEHCCR NGTILPKTMD EAQSKSAFQM EVYKMPPDLN RTARPHAPAN FRVSGASPLN QAYVCGQPAL VSPTEFPDPS GLASTTLAVA TWQAVCNMPV
301: DDSKAAKPPH CCVSFSAFYN ESVIPCSTCA CGCPTPAPTT CSTTAPALLL PPHALLMPFE WRAKETLKWL HDEELGAPPN PMPCGDNCGV SVNWHVATDA
401: AGGGSARGAL FNWEGADMRD WFATVVMDDK GYGGFEQAYS FNATAVGDGA IFMRGREGFD FLLRENNVSG VDYPVPGKQQ SVLSFTKKTA AGDVDVVGGD
501: GFPTKIFFNG EECAMPQRIP SQGVGIRASR GGVLVLLLLS FFFFLNFGAC I
Best Arabidopsis Sequence Match ( AT4G16120.1 )
(BLAST)
001: MDSAPNFIPR LLLLSLLIVS IPLTSSQSDA NTTNPSPSPP SDSDLCNGVF VSYTHTKGSK IPPNDTANQP YRFESVITVL NHGRDELKSW RVFVKFAHRE
101: ILVSASNAVL SDGSSLPVSV ENGTVFAGYP SSDLKSAIQT AGDVTQMQAR VELVGTQFGV APPNVPLPKN ITLATDGWKC PKATQKGTNV LQVCCIPDPD
201: YDNREIIDNE FLPRKDGDLT IMYDVVRSYS SNYMAQVTME NHNPLGRLDN WKLSFDWMRD EFIYTMKGAY PSIVDSSDCV DGPQAKHYQD LDFSNVLSCA
301: RRPTVIDLPP TKYNDSTFGL IPFCCRNGTI LPRSMDPSKS SSVFQMQVYK MPPDLNISAL SPPQNWRING TLNPDYKCGP PVRVSPSQFV DPSGLPSNRT
401: AFASWQVVCN ITQPKDASPR CCVSFSAYFN DSIVPCKTCA CGCSSNKAAR ACSATAPSLL LPQQALLVPF ENRTELTVAW AYLKQRPVPN PMPCGDNCGV
501: SINWHLATDY RGGWTARVTV FNWGETDFVD WFTAVQMKNA APGFEKAYSF NASTIGINGK NNTIFMEGLP GLNYLVAERD GENPLKNPRI PGKQQSVMSF
601: TKKLTPGINV PGGDGFPSKV FFNGEECSLP TILPMRSSQH RKHISVFLLA LPVLALLILR A
Arabidopsis Description
COBL7COBRA-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ17]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.