Factsheet for HORVU4Hr1G014530.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G231200.1	Wheat	extracellular	93.95	94.57
TraesCS4D01G082700.1	Wheat	extracellular	93.09	93.49
TraesCS4B01G084800.1	Wheat	extracellular	91.36	92.97
Os03t0416300-01	Rice	extracellular	79.48	80.35
OQU92393	Sorghum	extracellular	77.75	78.09
VIT_14s0083g01160.t01	Wine grape	vacuole	64.58	68.58
KRH72178	Soybean	mitochondrion	54.43	68.29
VIT_17s0000g05070.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	65.66	66.67
KRH54735	Soybean	endoplasmic reticulum	64.58	65.57
PGSC0003DMT400003470	Potato	extracellular	63.28	65.55
Solyc02g089120.2.1	Tomato	extracellular	63.28	65.55
KRH03165	Soybean	extracellular	63.93	65.2
Solyc02g065770.2.1	Tomato	extracellular	62.42	65.09
KRH63181	Soybean	endoplasmic reticulum	63.93	64.91
CDX86358	Canola	extracellular	61.12	64.91
CDX85277	Canola	extracellular	61.12	64.91
Bra025406.1-P	Field mustard	extracellular	61.12	64.91
KRH45084	Soybean	extracellular, golgi, plasma membrane	62.2	64.29
CDY70289	Canola	extracellular	55.08	64.23
PGSC0003DMT400068328	Potato	extracellular	61.56	64.19
KRH01360	Soybean	extracellular, golgi, plasma membrane	61.77	63.84
KRG93684	Soybean	extracellular, vacuole	62.2	63.44
KRH18352	Soybean	plasma membrane	61.99	62.66
HORVU2Hr1G033070.14	Barley	mitochondrion	63.28	62.34
AT5G60920.1	Thale cress	endoplasmic reticulum, plasma membrane, plastid	61.34	62.28
AT3G29810.1	Thale cress	extracellular	59.18	62.13
CDY16831	Canola	plasma membrane	61.34	62.01
CDX87193	Canola	plasma membrane	60.91	61.84
HORVU5Hr1G095910.12	Barley	extracellular, vacuole	61.34	61.74
CDY02184	Canola	plasma membrane	60.91	61.71
Bra012996.1-P	Field mustard	plasma membrane	60.69	61.49
Bra035951.1-P	Field mustard	plasma membrane	60.69	61.35
Bra040587.1-P	Field mustard	extracellular	58.1	61.28
CDY58691	Canola	plasma membrane	60.48	61.14
AT3G02210.1	Thale cress	extracellular	59.61	61.06
Bra039163.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	59.61	60.66
CDY60470	Canola	plasma membrane	59.4	60.04
CDY43250	Canola	plasma membrane	59.18	59.96
Bra029346.1-P	Field mustard	cytosol, plasma membrane, plastid	15.33	57.72
CDY42842	Canola	cytosol	15.12	57.38
HORVU5Hr1G067940.1	Barley	plasma membrane, plastid	57.88	56.78
HORVU3Hr1G007580.2	Barley	extracellular	45.79	56.53
CDY24004	Canola	cytosol, nucleus, plastid	10.37	56.47
HORVU3Hr1G009960.1	Barley	plastid	25.27	53.67
CDY29033	Canola	cytosol	20.73	52.75
HORVU5Hr1G096010.13	Barley	endoplasmic reticulum	31.53	52.33
HORVU2Hr1G033060.13	Barley	mitochondrion	49.03	50.78
KRH56778	Soybean	extracellular	22.46	49.76
HORVU0Hr1G004650.3	Barley	mitochondrion	42.12	46.99
HORVU2Hr1G033080.1	Barley	extracellular	17.93	45.11
CDY14723	Canola	cytosol	25.7	37.42
HORVU2Hr1G092510.1	Barley	mitochondrion	17.28	25.0
HORVU2Hr1G015440.1	Barley	cytosol	24.62	20.69
HORVU7Hr1G028350.1	Barley	golgi, mitochondrion, plasma membrane	27.65	19.05
HORVU0Hr1G030030.1	Barley	extracellular, plasma membrane	25.49	17.85
HORVU4Hr1G054770.1	Barley	plastid	26.13	15.32

Protein Annotations

EnsemblPlants:HORVU4Hr1G014530.1	EnsemblPlantsGene:HORVU4Hr1G014530	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987	GO:GO:0010215
GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007	InterPro:COBRA_pln
PANTHER:PTHR31673	PANTHER:PTHR31673:SF21	PFAM:PD140986	PFAM:PF04833	PIRSF:PIRSF038122	SEG:seg
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002957832	UniProt:M0WJW7	MapMan:21.1.2.2	:

Description

No Description!

Coordinates

chrchr4H:+:53710420..53714007

Molecular Weight (calculated)

51257.6 Da

IEP (calculated)

8.618

GRAVY (calculated)

-0.097

Length

463 amino acids

Sequence
(BLAST)

001: MAATSLLRTA AAAAALALLM LLLVGDVPLT EAYDPLDPTG NITIKWDITQ WTADGYVAVV SINNYQKYRH IQAPGWHLGW GWTKKEIIWS MTGAQTIEQG
101: DCSEFKGNIP HCCRRDPTTV DLLPGAAMGM QVGNCCKGGV LSSWVQDPVN AVASFQITVG RAGTSNRTVK APKNFTLKAP GPGYTCGVAH KVKPPTKFIS
201: LDGRRTTQAH VTWDVICTYS QFVAQRGPAC CVSLSSFYNE TIVDCPKCSC ACQNNITHPG SCVEGNSPYL ASVVNGPGKG SSTPLVRCSP HMCPIRVHWH
301: VKVNYRDYWR VKITISNWNY RMNYSQWNLV VQHPNFDNVT TIFSFNYKAL NPYGVINDTA MLWGLKYYND LLMVAGPDGN VQTELLFRKD PSTFTFEKGW
401: GFPRRIYFNG ESCVMPQPDL YPWLPSSSPR LTKTAFLALA IVACATVAFL YNHLVLDKYC GKT

Best Arabidopsis Sequence Match ( AT5G60920.1 )
(BLAST)

001: MESFFSRSTS IVSKLSFLAL WIVFLISSSS FTSTEAYDAL DPEGNITMKW DVMSWTPDGY VAVVTMFNFQ KYRHIQSPGW TLGWKWAKKE VIWSMVGAQT
101: TEQGDCSKYK GNIPHCCKKD PTVVDLLPGT PYNQQIANCC KGGVMNSWVQ DPATAASSFQ ISVGAAGTTN KTVRVPRNFT LMGPGPGYTC GPAKIVRPTK
201: FVTTDTRRTT QAMMTWNITC TYSQFLAQRT PTCCVSLSSF YNETIVGCPT CACGCQNNRT ESGACLDPDT PHLASVVSPP TKKGTVLPPL VQCTRHMCPI
301: RVHWHVKQNY KEYWRVKITI TNFNYRLNYT QWNLVAQHPN LDNITQIFSF NYKSLTPYAG LNDTAMLWGV KFYNDFLSEA GPLGNVQSEI LFRKDQSTFT
401: FEKGWAFPRR IYFNGDNCVM PPPDSYPFLP NGGSRSQFSF VAAVLLPLLV FFFFSA

Arabidopsis Description

COBProtein COBRA [Source:UniProtKB/Swiss-Prot;Acc:Q94KT8]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.