Factsheet for HORVU2Hr1G033070.14

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G182500.1	Wheat	golgi	80.43	83.08
TraesCS2A01G175100.1	Wheat	extracellular	79.57	82.56
TraesCS2B01G201500.1	Wheat	plasma membrane	78.94	80.83
EER97506	Sorghum	extracellular, plasma membrane	69.57	71.4
Os07t0604300-01	Rice	extracellular	67.23	70.85
Zm00001d022081_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	66.6	68.04
KRH72178	Soybean	mitochondrion	52.98	67.48
VIT_17s0000g05070.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	64.04	66.01
VIT_14s0083g01160.t01	Wine grape	vacuole	60.85	65.6
Solyc02g089120.2.1	Tomato	extracellular	62.13	65.32
PGSC0003DMT400003470	Potato	extracellular	61.7	64.88
Solyc02g065770.2.1	Tomato	extracellular	61.06	64.64
CDX86358	Canola	extracellular	59.57	64.22
Bra025406.1-P	Field mustard	extracellular	59.57	64.22
KRH54735	Soybean	endoplasmic reticulum	62.13	64.04
KRH01360	Soybean	extracellular, golgi, plasma membrane	60.64	63.62
CDX85277	Canola	extracellular	58.94	63.53
KRH03165	Soybean	extracellular	61.28	63.44
KRH45084	Soybean	extracellular, golgi, plasma membrane	60.43	63.39
PGSC0003DMT400068328	Potato	extracellular	59.79	63.29
HORVU4Hr1G014530.1	Barley	extracellular	62.34	63.28
KRH63181	Soybean	endoplasmic reticulum	61.28	63.16
CDY70289	Canola	extracellular	52.13	61.71
KRG93684	Soybean	extracellular, vacuole	58.94	61.01
AT3G29810.1	Thale cress	extracellular	57.23	61.0
KRH18352	Soybean	plasma membrane	59.36	60.92
Bra040587.1-P	Field mustard	extracellular	56.81	60.82
AT5G60920.1	Thale cress	endoplasmic reticulum, plasma membrane, plastid	58.72	60.53
CDY02184	Canola	plasma membrane	58.51	60.18
HORVU5Hr1G067940.1	Barley	plasma membrane, plastid	60.43	60.17
CDX87193	Canola	plasma membrane	58.3	60.09
CDY16831	Canola	plasma membrane	58.51	60.04
Bra039163.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	58.09	60.0
Bra012996.1-P	Field mustard	plasma membrane	58.3	59.96
AT3G02210.1	Thale cress	extracellular	57.66	59.96
CDY43250	Canola	plasma membrane	58.09	59.74
CDY58691	Canola	plasma membrane	58.09	59.61
CDY60470	Canola	plasma membrane	57.87	59.39
Bra035951.1-P	Field mustard	plasma membrane	57.87	59.39
HORVU5Hr1G095910.12	Barley	extracellular, vacuole	57.87	59.13
CDY24004	Canola	cytosol, nucleus, plastid	10.43	57.65
CDY42842	Canola	cytosol	14.89	57.38
HORVU3Hr1G007580.2	Barley	extracellular	45.74	57.33
Bra029346.1-P	Field mustard	cytosol, plasma membrane, plastid	14.89	56.91
HORVU3Hr1G009960.1	Barley	plastid	25.53	55.05
CDY29033	Canola	cytosol	20.43	52.75
HORVU2Hr1G033060.13	Barley	mitochondrion	48.51	51.01
KRH56778	Soybean	extracellular	21.28	47.85
HORVU0Hr1G004650.3	Barley	mitochondrion	41.06	46.51
HORVU5Hr1G096010.13	Barley	endoplasmic reticulum	27.45	46.24
HORVU2Hr1G033080.1	Barley	extracellular	17.45	44.57
CDY14723	Canola	cytosol	25.11	37.11
HORVU2Hr1G092510.1	Barley	mitochondrion	18.09	26.56
HORVU2Hr1G015440.1	Barley	cytosol	21.7	18.51
HORVU7Hr1G028350.1	Barley	golgi, mitochondrion, plasma membrane	25.74	18.01
HORVU0Hr1G030030.1	Barley	extracellular, plasma membrane	22.55	16.04
HORVU4Hr1G054770.1	Barley	plastid	23.83	14.18

Protein Annotations

EnsemblPlants:HORVU2Hr1G033070.14	EnsemblPlantsGene:HORVU2Hr1G033070	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987	GO:GO:0010215
GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007	InterPro:COBRA_pln
ncoils:Coil	PANTHER:PTHR31673	PANTHER:PTHR31673:SF7	PFAM:PD140986	PFAM:PF04833	PIRSF:PIRSF038122
SEG:seg	UniParc:UPI000B467590	UniProt:A0A287HMK4	MapMan:21.1.2.2	:	:

Description

COBRA-like protein [Source:UniProtKB/TrEMBL;Acc:A0A287HMK4]

Coordinates

chrchr2H:-:130884986..130888473

Molecular Weight (calculated)

53243.0 Da

IEP (calculated)

8.434

GRAVY (calculated)

-0.407

Length

470 amino acids

Sequence
(BLAST)

001: GECSWFLRLD RPLDRPWRRR HRVHRSCPPP LRSSSSPSPS PRWCLHQFAD AYDSLDPTGN ITIKWDVRQW TDDGYVATVS LYNHQQYRHI QAPGWKLGWV
101: WAEKEMIWKM TGAQTTEQGD CSRFKAEAHC CRTDPEVVDL LPGAPYNKQT SNCCKGGVLS SWGQDPANAI ATFEVRVGQA GTSRSSIKAP TNFTLMAPGP
201: GYTCGPAKKV ERTKFIDGDA RRTIQALETW NVTCTYSQFV AGRTPTCCVE LSSFYNSTIV ECNTCSCGCQ DNSTSPVSCV KANSPYLASV VNGDSTNIPA
301: PLVQCTSHMC PIRVHWHVKA NYKEYWRVKI TATNLNYRMN YSQWNLVAQH PNFANLTTIF SFKYKDLNPY GIINDTGMMW GIKYYNDLLM TADRNGNVQS
401: ELLFRKDPET FTFQKGWAFP RRVYFNGENC VMPPPDVYPW LPNASHQLSA SLTIPFITVW TALAFLLVHV

Best Arabidopsis Sequence Match ( AT3G02210.1 )
(BLAST)

001: MGFFLCSSSS IFFKFGISII FLVSFSGLTP SEAYDPLDPS GNITVKWDII TWTGDGYVAT VTVYNFQQYR HIQAPGWTLG WSWAKREVIW GMNGGQTTEQ
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL

Arabidopsis Description

COBL1COBL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VHK7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.