Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29033 | Canola | cytosol | 98.82 | 46.15 |
| Zm00001d031479_P001 | Maize | cytosol, mitochondrion | 57.65 | 29.88 |
| Os03t0754500-00 | Rice | extracellular | 57.65 | 22.9 |
| CDY14723 | Canola | cytosol | 82.35 | 22.01 |
| CDY58695 | Canola | extracellular | 45.88 | 18.93 |
| CDY02181 | Canola | endoplasmic reticulum, extracellular | 45.88 | 18.93 |
| TraesCS5D01G402000.1 | Wheat | extracellular | 48.24 | 17.98 |
| TraesCS5B01G397000.2 | Wheat | extracellular | 47.06 | 17.62 |
| HORVU5Hr1G096010.13 | Barley | endoplasmic reticulum | 52.94 | 16.13 |
| CDY66895 | Canola | cytosol | 10.59 | 15.79 |
| CDY70289 | Canola | extracellular | 70.59 | 15.11 |
| Bra025406.1-P | Field mustard | extracellular | 76.47 | 14.91 |
| CDX86358 | Canola | extracellular | 76.47 | 14.91 |
| CDX85277 | Canola | extracellular | 76.47 | 14.91 |
| KRH72178 | Soybean | mitochondrion | 64.71 | 14.91 |
| CDY26444 | Canola | plastid | 62.35 | 14.48 |
| CDY43250 | Canola | plasma membrane | 70.59 | 13.13 |
| CDY60470 | Canola | plasma membrane | 70.59 | 13.1 |
| KRH01360 | Soybean | extracellular, golgi, plasma membrane | 68.24 | 12.95 |
| KRH45084 | Soybean | extracellular, golgi, plasma membrane | 68.24 | 12.95 |
| CDX90983 | Canola | extracellular | 64.71 | 12.64 |
| GSMUA_Achr4P01440_001 | Banana | extracellular, plasma membrane | 67.06 | 12.47 |
| GSMUA_Achr1P24500_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 67.06 | 12.45 |
| CDX69511 | Canola | plasma membrane | 65.88 | 12.31 |
| KRG93684 | Soybean | extracellular, vacuole | 64.71 | 12.11 |
| Os07t0604300-01 | Rice | extracellular | 63.53 | 12.11 |
| CDX85543 | Canola | extracellular, plasma membrane, vacuole | 64.71 | 12.06 |
| CDX87193 | Canola | plasma membrane | 64.71 | 12.06 |
| CDY02184 | Canola | plasma membrane | 64.71 | 12.04 |
| KRH18352 | Soybean | plasma membrane | 64.71 | 12.01 |
| CDY16831 | Canola | plasma membrane | 64.71 | 12.01 |
| CDY58691 | Canola | plasma membrane | 64.71 | 12.01 |
| EER90859 | Sorghum | extracellular | 60.0 | 12.0 |
| EER90860 | Sorghum | extracellular, golgi, plasma membrane | 62.35 | 11.8 |
| Zm00001d013256_P001 | Maize | extracellular | 62.35 | 11.8 |
| EER97506 | Sorghum | extracellular, plasma membrane | 63.53 | 11.79 |
| GSMUA_Achr2P06240_001 | Banana | mitochondrion | 65.88 | 11.74 |
| TraesCS6D01G364400.1 | Wheat | extracellular | 60.0 | 11.41 |
| TraesCS6B01G418400.1 | Wheat | extracellular | 58.82 | 11.19 |
| Os05t0386800-01 | Rice | extracellular | 60.0 | 11.16 |
| Zm00001d034049_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 58.82 | 11.06 |
| TraesCS6A01G379800.1 | Wheat | extracellular | 57.65 | 10.96 |
| TraesCS2A01G175100.1 | Wheat | extracellular | 57.65 | 10.82 |
| TraesCS4B01G084800.1 | Wheat | extracellular | 57.65 | 10.77 |
| TraesCS5D01G401900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 57.65 | 10.72 |
| TraesCS5B01G396900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 57.65 | 10.72 |
| TraesCS5A01G392000.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 57.65 | 10.72 |
| HORVU5Hr1G095910.12 | Barley | extracellular, vacuole | 57.65 | 10.65 |
| Zm00001d022081_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 57.65 | 10.65 |
| OQU92393 | Sorghum | extracellular | 57.65 | 10.63 |
| TraesCS4D01G082700.1 | Wheat | extracellular | 57.65 | 10.63 |
| Os10t0497700-01 | Rice | extracellular | 52.94 | 10.59 |
| Os03t0416300-01 | Rice | extracellular | 56.47 | 10.48 |
| HORVU2Hr1G033070.14 | Barley | mitochondrion | 57.65 | 10.43 |
| HORVU4Hr1G014530.1 | Barley | extracellular | 56.47 | 10.37 |
| TraesCS3D01G404800.2 | Wheat | plasma membrane | 55.29 | 10.28 |
| TraesCS4A01G231200.1 | Wheat | extracellular | 55.29 | 10.22 |
| TraesCS2D01G182500.1 | Wheat | golgi | 51.76 | 9.67 |
| TraesCS2B01G201500.1 | Wheat | plasma membrane | 51.76 | 9.59 |
| HORVU5Hr1G067940.1 | Barley | plasma membrane, plastid | 52.94 | 9.53 |
| CDX93481 | Canola | plasma membrane | 47.06 | 9.11 |
| CDY31063 | Canola | plasma membrane | 45.88 | 8.99 |
| CDY20671 | Canola | extracellular, plasma membrane, vacuole | 44.71 | 8.35 |
| TraesCS3B01G443000.1 | Wheat | cytosol, plasma membrane, vacuole | 38.82 | 7.89 |
| CDX94950 | Canola | nucleus | 47.06 | 7.02 |
| CDX70627 | Canola | cytosol, nucleus, plasma membrane | 68.24 | 6.76 |
| CDY19626 | Canola | mitochondrion | 21.18 | 4.37 |
| CDY49611 | Canola | plasma membrane | 27.06 | 3.47 |
| CDY00037 | Canola | plasma membrane | 27.06 | 3.47 |
| CDY34424 | Canola | plasma membrane | 24.71 | 3.19 |
| CDY32210 | Canola | plasma membrane | 24.71 | 3.18 |
| CDY36030 | Canola | vacuole | 22.35 | 2.93 |
| CDY52722 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 22.35 | 2.86 |
| CDX82237 | Canola | endoplasmic reticulum, vacuole | 22.35 | 2.84 |
| CDX89278 | Canola | extracellular, golgi, vacuole | 21.18 | 2.71 |
| CDY34980 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 21.18 | 2.7 |
| CDY09102 | Canola | cytosol | 8.24 | 2.68 |
| CDX97377 | Canola | endoplasmic reticulum, golgi, vacuole | 20.0 | 2.56 |
| CDY29275 | Canola | extracellular, plasma membrane, vacuole | 20.0 | 2.56 |
| CDY14283 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 20.0 | 2.49 |
| CDY55591 | Canola | plasma membrane | 22.35 | 2.28 |
| CDY43072 | Canola | plasma membrane | 22.35 | 2.25 |
| CDX87194 | Canola | mitochondrion | 3.53 | 1.44 |
| CDY26445 | Canola | cytosol | 2.35 | 1.18 |
| TraesCS3A01G409900.1 | Wheat | plastid | 3.53 | 1.08 |
| CDY42842 | Canola | cytosol | 0.0 | 0.0 |
| CDY57659 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY24004 | EnsemblPlantsGene:GSBRNA2T00024521001 | GO:A0A078GF76 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0010215 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 |
| InterPro:COBRA_pln | PANTHER:PTHR31673 | PANTHER:PTHR31673:SF3 | PFAM:PD140986 | PFAM:PF04833 | ProteinID:CDY24004 |
| ProteinID:CDY24004.1 | UniParc:UPI0004EDEEBC | UniProt:A0A078GF76 | MapMan:21.1.2.2 | : | : |
Description
BnaC03g16870DBnaC03g16870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GF76]
Coordinates
chrLK032152:-:447033..447422
Molecular Weight (calculated)
8983.7 Da
IEP (calculated)
8.054
GRAVY (calculated)
-0.187
Length
85 amino acids
Sequence
(BLAST)
(BLAST)
1: MVGAQATEQG DCSKFKGNIP HCCKKTPTVV DLLPGTPYNQ HISNCCRGGV ISSWAQDPAT AVGRTTSSRS CNVHSICVPS EFIGM
001: MNILFSRFSF LLLFLCSWTS FTFTTTEAYD ALDPYGNITI KWDIMSWTGD GYVAVVTIFN FQQYRHIEAP GWQLGWSWMK KEVIWSMVGG QATEQGDCSK
101: FKGNIPHCCK KTPAIVDLLP GTPYNQQISN CCRGGVISAW AQDPATAISS FQISVGQSGT TNTTVRAPRN ITLKAPGPGY TCGPAKLVKP SRFISADKRR
201: KTQSLLTWNI TCTYSQFLAR KTPTCCVSLS AFYNETIVPC PTCSCGCQNS SQAGTCVDPK IASVVPALGK NNLEPLLQCT QHMCPIRVHW HVKTSYKEYW
301: RVKVAITNFN YNMNYSQWNL VVQHPNFDNL TKLFSFNYKP LNPYLNINDT AMLWGIKFYN DFLSQAGPVG NVQSELLFQK NPLEFTFEKG WAFPRRIYFN
401: GDNCVMPPPD SYPWLPNASP NIATSPFVIL LITFLSVLIL M
101: FKGNIPHCCK KTPAIVDLLP GTPYNQQISN CCRGGVISAW AQDPATAISS FQISVGQSGT TNTTVRAPRN ITLKAPGPGY TCGPAKLVKP SRFISADKRR
201: KTQSLLTWNI TCTYSQFLAR KTPTCCVSLS AFYNETIVPC PTCSCGCQNS SQAGTCVDPK IASVVPALGK NNLEPLLQCT QHMCPIRVHW HVKTSYKEYW
301: RVKVAITNFN YNMNYSQWNL VVQHPNFDNL TKLFSFNYKP LNPYLNINDT AMLWGIKFYN DFLSQAGPVG NVQSELLFQK NPLEFTFEKG WAFPRRIYFN
401: GDNCVMPPPD SYPWLPNASP NIATSPFVIL LITFLSVLIL M
Arabidopsis Description
COBL3COBRA-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Q7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.