Factsheet for TraesCS3A01G409900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G443000.1	Wheat	cytosol, plasma membrane, vacuole	94.22	62.44
HORVU5Hr1G067940.1	Barley	plasma membrane, plastid	92.78	54.45
CDY42842	Canola	cytosol	23.1	52.46
TraesCS3D01G404800.2	Wheat	plasma membrane	83.39	50.55
Bra029346.1-P	Field mustard	cytosol, plasma membrane, plastid	22.38	50.41
KRH72178	Soybean	mitochondrion	63.9	47.97
EER97506	Sorghum	extracellular, plasma membrane	73.29	44.32
Os07t0604300-01	Rice	extracellular	70.4	43.72
Zm00001d022081_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	70.76	42.61
VIT_14s0083g01160.t01	Wine grape	vacuole	64.98	41.28
KRG93684	Soybean	extracellular, vacuole	66.06	40.31
PGSC0003DMT400003470	Potato	extracellular	64.98	40.27
KRH01360	Soybean	extracellular, golgi, plasma membrane	64.98	40.18
Solyc02g065770.2.1	Tomato	extracellular	64.26	40.09
TraesCS2A01G175100.1	Wheat	extracellular	65.34	39.96
VIT_17s0000g05070.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	65.7	39.91
Solyc02g089120.2.1	Tomato	extracellular	64.26	39.82
KRH54735	Soybean	endoplasmic reticulum	65.34	39.69
PGSC0003DMT400068328	Potato	extracellular	63.54	39.64
KRH18352	Soybean	plasma membrane	65.34	39.52
KRH63181	Soybean	endoplasmic reticulum	64.98	39.47
Bra025406.1-P	Field mustard	extracellular	62.09	39.45
CDX86358	Canola	extracellular	62.09	39.45
KRH45084	Soybean	extracellular, golgi, plasma membrane	63.54	39.29
CDX85277	Canola	extracellular	61.73	39.22
KRH03165	Soybean	extracellular	64.26	39.21
TraesCS4A01G231200.1	Wheat	extracellular	64.62	38.91
Bra040587.1-P	Field mustard	extracellular	61.37	38.72
TraesCS6A01G379800.1	Wheat	extracellular	62.45	38.7
CDY70289	Canola	extracellular	54.87	38.29
TraesCS5A01G392000.1	Wheat	endoplasmic reticulum, extracellular, golgi	62.82	38.07
AT3G29810.1	Thale cress	extracellular	60.29	37.87
CDY02184	Canola	plasma membrane	61.73	37.42
CDY58691	Canola	plasma membrane	61.73	37.34
AT5G60920.1	Thale cress	endoplasmic reticulum, plasma membrane, plastid	61.37	37.28
Bra012996.1-P	Field mustard	plasma membrane	61.37	37.2
AT3G02210.1	Thale cress	extracellular	59.93	36.73
CDX87193	Canola	plasma membrane	60.29	36.62
Bra039163.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	59.93	36.48
CDY16831	Canola	plasma membrane	60.29	36.46
CDY43250	Canola	plasma membrane	59.57	36.1
CDY60470	Canola	plasma membrane	59.57	36.03
Bra035951.1-P	Field mustard	plasma membrane	59.21	35.81
TraesCS5A01G095200.1	Wheat	extracellular	55.23	34.08
TraesCS2A01G175000.1	Wheat	plasma membrane	53.79	33.18
TraesCS2A01G388600.1	Wheat	extracellular, plasma membrane	37.91	28.15
TraesCS6A01G158000.1	Wheat	endoplasmic reticulum	34.66	27.59
TraesCS6A01G330900.1	Wheat	extracellular, plasma membrane	40.43	26.92
KRH56778	Soybean	extracellular	9.03	11.96
TraesCS7A01G136600.1	Wheat	mitochondrion	26.71	10.98
TraesCS4A01G117100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	26.35	10.85
TraesCS2A01G092900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	24.19	9.68
CDY14723	Canola	cytosol	10.83	9.43
CDY24004	Canola	cytosol, nucleus, plastid	1.08	3.53
CDY29033	Canola	cytosol	1.08	1.65

Protein Annotations

EnsemblPlants:TraesCS3A01G409900.1	EnsemblPlantsGene:TraesCS3A01G409900	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987	GO:GO:0010215
GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007	InterPro:COBRA_pln
PANTHER:PTHR31673	PANTHER:PTHR31673:SF7	PFAM:PD140986	PFAM:PF04833	PIRSF:PIRSF038122	MapMan:21.1.2.2

Description

No Description!

Coordinates

chr3A:-:654316676..654318340

Molecular Weight (calculated)

31128.3 Da

IEP (calculated)

8.741

GRAVY (calculated)

-0.251

Length

277 amino acids

Sequence
(BLAST)

001: MNFTLKAPGP GYTCGPATKL DEPTKFTTPD GRRKTQAHMT WTVTCTYSQF RALRYPTCCL SLSVFYSDTL VTCPKCSCGC QDNSTKPGIC VEGNSPYLGS
101: VMNGQDKNGL APLVQCTTHM CPIRVHWHVK ANYKEYLRVK ITVTNFNYGM NYSQWNLVAQ HPNVNSLTSI TSFNYTALNP YGLMNDTALL WGIRHYNDYL
201: LTAGPDGYVQ SELLFRKDPS TFTLRAGWAF PRRVYFNGDK CVTPPPDAYP WLPNASTKST VSVIVPLVLW MLANPYF

Best Arabidopsis Sequence Match ( AT3G02210.1 )
(BLAST)

001: MGFFLCSSSS IFFKFGISII FLVSFSGLTP SEAYDPLDPS GNITVKWDII TWTGDGYVAT VTVYNFQQYR HIQAPGWTLG WSWAKREVIW GMNGGQTTEQ
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL

Arabidopsis Description

COBL1COBL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VHK7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.